RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 CCZ1BP86790 482 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 CCZ1P86791 482 aaPredicted RBP17.06■□□□□ 0.32
CD40-207ENST00000620709 ZNF77Q15935 545 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 RSPO4Q2I0M5 234 aaPredicted RBP17.06■□□□□ 0.32
CD40-207ENST00000620709 ZNF699Q32M78 642 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 FIGNQ5HY92 759 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 TDRD10Q5VZ19 366 aaKnown RBP17.06■□□□□ 0.32
CD40-207ENST00000620709 NAIF1Q69YI7 327 aaPredicted RBP17.06■□□□□ 0.32
CD40-207ENST00000620709 CEP68Q76N32 757 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 DGLUCYQ7Z3D6 616 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 LONP2Q86WA8 852 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 SYNPOQ8N3V7 929 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 PLEKHO2Q8TD55 490 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 SLC35C1Q96A29 364 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 CHFRQ96EP1 664 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 ZNF518BQ9C0D4 1074 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 ANAPC1Q9H1A4 1944 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 SMYD3Q9H7B4 428 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 ECT2Q9H8V3 914 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 SLC8A2Q9UPR5 921 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 GREB1Q4ZG55 1949 aa17.05■□□□□ 0.32
CD40-207ENST00000620709 K7ESF4 209 aa17.05■□□□□ 0.32
CD40-207ENST00000620709 HRO43593 1189 aa17.05■□□□□ 0.32
CD40-207ENST00000620709 CASP14P31944 242 aa17.05■□□□□ 0.32
CD40-207ENST00000620709 GJA4P35212 333 aa17.05■□□□□ 0.32
CD40-207ENST00000620709 PXNP49023 591 aaPredicted RBP17.05■□□□□ 0.32
CD40-207ENST00000620709 CACNA2D1P54289 1103 aa17.05■□□□□ 0.32
CD40-207ENST00000620709 ADKP55263 362 aaKnown RBP17.05■□□□□ 0.32
CD40-207ENST00000620709 FOXK2Q01167 660 aa17.05■□□□□ 0.32
CD40-207ENST00000620709 SPEM2Q0P670 501 aa17.05■□□□□ 0.32
CD40-207ENST00000620709 NCOA4Q13772 614 aa17.05■□□□□ 0.32
CD40-207ENST00000620709 ZNF667Q5HYK9 610 aa17.05■□□□□ 0.32
CD40-207ENST00000620709 TMEM196Q5HYL7 178 aa17.05■□□□□ 0.32
CD40-207ENST00000620709 PKN3Q6P5Z2 889 aa17.05■□□□□ 0.32
CD40-207ENST00000620709 ERMP1Q7Z2K6 904 aa17.05■□□□□ 0.32
CD40-207ENST00000620709 GPR161Q8N6U8 529 aaKnown RBP17.05■□□□□ 0.32
CD40-207ENST00000620709 OSCP1Q8WVF1 389 aa17.05■□□□□ 0.32
CD40-207ENST00000620709 CPLX3Q8WVH0 158 aa17.05■□□□□ 0.32
CD40-207ENST00000620709 ATP2A3Q93084 1043 aa17.05■□□□□ 0.32
CD40-207ENST00000620709 EXOC4Q96A65 974 aa17.05■□□□□ 0.32
CD40-207ENST00000620709 PANX2Q96RD6 677 aa17.05■□□□□ 0.32
CD40-207ENST00000620709 P2RY13Q9BPV8 354 aa17.05■□□□□ 0.32
CD40-207ENST00000620709 B3GNT5Q9BYG0 378 aa17.05■□□□□ 0.32
CD40-207ENST00000620709 FBRSL1Q9HCM7 1045 aaKnown RBP17.05■□□□□ 0.32
CD40-207ENST00000620709 EHD2Q9NZN4 543 aa17.05■□□□□ 0.32
CD40-207ENST00000620709 GCNT4Q9P109 453 aa17.05■□□□□ 0.32
CD40-207ENST00000620709 PTPRDP23468 1912 aa17.04■□□□□ 0.32
CD40-207ENST00000620709 TRDMT1O14717 391 aaKnown RBP17.04■□□□□ 0.32
CD40-207ENST00000620709 RNF40O75150 1001 aa17.04■□□□□ 0.32
CD40-207ENST00000620709 SKILP12757 684 aa17.04■□□□□ 0.32
CD40-207ENST00000620709 PDE6CP51160 858 aa17.04■□□□□ 0.32
CD40-207ENST00000620709 GOLGA8FQ08AF8 430 aa17.04■□□□□ 0.32
CD40-207ENST00000620709 GOLGA8DPQ0D2H9 430 aa17.04■□□□□ 0.32
CD40-207ENST00000620709 USP4Q13107 963 aa17.04■□□□□ 0.32
CD40-207ENST00000620709 LAIR1Q6GTX8 287 aa17.04■□□□□ 0.32
CD40-207ENST00000620709 B3GALNT2Q8NCR0 500 aa17.04■□□□□ 0.32
CD40-207ENST00000620709 PARD3BQ8TEW8 1205 aa17.04■□□□□ 0.32
CD40-207ENST00000620709 TTYH3Q9C0H2 523 aa17.04■□□□□ 0.32
CD40-207ENST00000620709 ELOVL4Q9GZR5 314 aa17.04■□□□□ 0.32
CD40-207ENST00000620709 XYLT2Q9H1B5 865 aa17.04■□□□□ 0.32
CD40-207ENST00000620709 LINC00597Q9H2U6 94 aa17.04■□□□□ 0.32
CD40-207ENST00000620709 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.04■□□□□ 0.32
CD40-207ENST00000620709 POLR3BQ9NW08 1133 aaPredicted RBP17.04■□□□□ 0.32
CD40-207ENST00000620709 SMPD4Q9NXE4 827 aa17.04■□□□□ 0.32
CD40-207ENST00000620709 CAPN11Q9UMQ6 739 aa17.04■□□□□ 0.32
CD40-207ENST00000620709 A0A1W2PQJ5 194 aa17.03■□□□□ 0.32
CD40-207ENST00000620709 GTPBP10A4D1E9 387 aaKnown RBP17.03■□□□□ 0.32
CD40-207ENST00000620709 SCAMP3O14828 347 aaKnown RBP17.03■□□□□ 0.32
CD40-207ENST00000620709 ATG13O75143 517 aa17.03■□□□□ 0.32
CD40-207ENST00000620709 KLK7P49862 253 aa17.03■□□□□ 0.32
CD40-207ENST00000620709 VAMP7P51809 220 aa17.03■□□□□ 0.32
CD40-207ENST00000620709 AP3M2P53677 418 aa17.03■□□□□ 0.32
CD40-207ENST00000620709 DLG4P78352 724 aa17.03■□□□□ 0.32
CD40-207ENST00000620709 TAF10Q12962 218 aa17.03■□□□□ 0.32
CD40-207ENST00000620709 NR1H3Q13133 447 aa17.03■□□□□ 0.32
CD40-207ENST00000620709 PUM1Q14671 1186 aaKnown RBP eCLIP17.03■□□□□ 0.32
CD40-207ENST00000620709 NEK11Q8NG66 645 aa17.03■□□□□ 0.32
CD40-207ENST00000620709 C8orf48Q96LL4 319 aa17.03■□□□□ 0.32
CD40-207ENST00000620709 MMRN2Q9H8L6 949 aa17.03■□□□□ 0.32
CD40-207ENST00000620709 PYCARDQ9ULZ3 195 aa17.03■□□□□ 0.32
CD40-207ENST00000620709 ARHGAP26Q9UNA1 814 aa17.03■□□□□ 0.32
CD40-207ENST00000620709 LUC7L2Q9Y383 392 aaKnown RBP17.03■□□□□ 0.32
CD40-207ENST00000620709 CEP250Q9BV73 2442 aa17.03■□□□□ 0.32
CD40-207ENST00000620709 ATP8B3O60423 1300 aa17.02■□□□□ 0.32
CD40-207ENST00000620709 ZNF840PA6NDX5 716 aa17.02■□□□□ 0.32
CD40-207ENST00000620709 LEFTY2O00292 366 aa17.02■□□□□ 0.32
CD40-207ENST00000620709 PAPSS2O95340 614 aaPredicted RBP17.02■□□□□ 0.32
CD40-207ENST00000620709 STAU1O95793 577 aaKnown RBP17.02■□□□□ 0.32
CD40-207ENST00000620709 C4BPAP04003 597 aaKnown RBP17.02■□□□□ 0.32
CD40-207ENST00000620709 FAM163BP0C2L3 166 aa17.02■□□□□ 0.32
CD40-207ENST00000620709 DRD1P21728 446 aa17.02■□□□□ 0.32
CD40-207ENST00000620709 ENPEPQ07075 957 aa17.02■□□□□ 0.32
CD40-207ENST00000620709 KCNMA1Q12791 1236 aa17.02■□□□□ 0.32
CD40-207ENST00000620709 ORC1Q13415 861 aa17.02■□□□□ 0.32
CD40-207ENST00000620709 EML3Q32P44 896 aa17.02■□□□□ 0.32
CD40-207ENST00000620709 CD101Q93033 1021 aa17.02■□□□□ 0.32
CD40-207ENST00000620709 SLITRK1Q96PX8 696 aa17.02■□□□□ 0.32
CD40-207ENST00000620709 NAA15Q9BXJ9 866 aaKnown RBP17.02■□□□□ 0.32
CD40-207ENST00000620709 PARD6AQ9NPB6 346 aa17.02■□□□□ 0.32
CD40-207ENST00000620709 FAM207AQ9NSI2 230 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms