RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 HOXA2O43364 376 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 CXCL10P02778 98 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 KDELR1P24390 212 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 CYP2C18P33260 490 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 SCNN1AP37088 669 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 MNX1P50219 401 aaPredicted RBP13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 TKTL1P51854 596 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 COPS2P61201 443 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 KRT17Q04695 432 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 TLE2Q04725 743 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 FAAP100Q0VG06 881 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 INTS6LQ5JSJ4 861 aaKnown RBP13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 COLGALT2Q8IYK4 626 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 THEM5Q8N1Q8 247 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 OR10T2Q8NGX3 314 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 FAM76AQ8TAV0 307 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 SMOQ99835 787 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 ACBD6Q9BR61 282 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 ZMYND15Q9H091 742 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 TMEM30AQ9NV96 361 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 ATP11BQ9Y2G3 1177 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 TSC2P49815 1807 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 C3orf70A6NLC5 250 aaPredicted RBP13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 GOLGA8KD6RF30 607 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 YWHAHQ04917 246 aaPredicted RBP13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 PRUNE1Q86TP1 453 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 EIF1ADQ8N9N8 165 aaKnown RBP13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 SMARCD1Q96GM5 515 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 TMLHEQ9NVH6 421 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 GPATCH2LQ9NWQ4 482 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 HCSTQ9UBK5 93 aa13.28□□□□□ -0.28
TNFAIP3-209ENST00000619035 H0YGN5 161 aa13.27□□□□□ -0.28
TNFAIP3-209ENST00000619035 TADA2AO75478 443 aa13.27□□□□□ -0.28
TNFAIP3-209ENST00000619035 BDNFP23560 247 aa13.27□□□□□ -0.28
TNFAIP3-209ENST00000619035 ATXN1P54253 815 aaKnown RBP13.27□□□□□ -0.28
TNFAIP3-209ENST00000619035 CDH6P55285 790 aa13.27□□□□□ -0.28
TNFAIP3-209ENST00000619035 C1QTNF8P60827 252 aa13.27□□□□□ -0.28
TNFAIP3-209ENST00000619035 EFHC1Q5JVL4 640 aa13.27□□□□□ -0.28
TNFAIP3-209ENST00000619035 ARCQ7LC44 396 aa13.27□□□□□ -0.28
TNFAIP3-209ENST00000619035 GPRIN1Q7Z2K8 1008 aa13.27□□□□□ -0.28
TNFAIP3-209ENST00000619035 DNAJC5GQ8N7S2 189 aa13.27□□□□□ -0.28
TNFAIP3-209ENST00000619035 LRRC45Q96CN5 670 aa13.27□□□□□ -0.28
TNFAIP3-209ENST00000619035 NCAPGQ9BPX3 1015 aa13.27□□□□□ -0.28
TNFAIP3-209ENST00000619035 HOMER3Q9NSC5 361 aa13.27□□□□□ -0.28
TNFAIP3-209ENST00000619035 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.27□□□□□ -0.28
TNFAIP3-209ENST00000619035 NFS1Q9Y697 457 aa13.27□□□□□ -0.28
TNFAIP3-209ENST00000619035 SCN5AQ14524 2016 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 SYNJ2BP-COX16A0A087WUM0 186 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 TYMPP19971 482 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 VPS41P49754 854 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 ATP1A2P50993 1020 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 HDAC4P56524 1084 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 MRPS5P82675 430 aaKnown RBP13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 TSPY1Q01534 308 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 ADCY1Q08828 1119 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 KRT81Q14533 505 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 CCNG2Q16589 344 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 DCAF6Q58WW2 860 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 CYP4V2Q6ZWL3 525 aaPredicted RBP13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 GSTA5Q7RTV2 222 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 LRRTM3Q86VH5 581 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 RFX6Q8HWS3 928 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 DEFB106AQ8N104 65 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 ZMIZ2Q8NF64 920 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 TET1Q8NFU7 2136 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 GRK7Q8WTQ7 553 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 KCTD13Q8WZ19 329 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 ADAM33Q9BZ11 813 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 ULBP1Q9BZM6 244 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 RABEP2Q9H5N1 569 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 COX16Q9P0S2 106 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 SAE1Q9UBE0 346 aaPredicted RBP13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 ASIC3Q9UHC3 531 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 PCDHB8Q9UN66 801 aa13.27□□□□□ -0.29
TNFAIP3-209ENST00000619035 CST8O60676 142 aa13.26□□□□□ -0.29
TNFAIP3-209ENST00000619035 GAS8O95995 478 aa13.26□□□□□ -0.29
TNFAIP3-209ENST00000619035 OR4Q2P0C623 313 aa13.26□□□□□ -0.29
TNFAIP3-209ENST00000619035 PTPN7P35236 360 aa13.26□□□□□ -0.29
TNFAIP3-209ENST00000619035 GJA8P48165 433 aa13.26□□□□□ -0.29
TNFAIP3-209ENST00000619035 ZNF844Q08AG5 666 aa13.26□□□□□ -0.29
TNFAIP3-209ENST00000619035 MMRN1Q13201 1228 aa13.26□□□□□ -0.29
TNFAIP3-209ENST00000619035 ZC3H12AQ5D1E8 599 aaKnown RBP13.26□□□□□ -0.29
TNFAIP3-209ENST00000619035 CEP57Q86XR8 500 aa13.26□□□□□ -0.29
TNFAIP3-209ENST00000619035 ATL2Q8NHH9 583 aa13.26□□□□□ -0.29
TNFAIP3-209ENST00000619035 UHMK1Q8TAS1 419 aaKnown RBP13.26□□□□□ -0.29
TNFAIP3-209ENST00000619035 CASD1Q96PB1 797 aa13.26□□□□□ -0.29
TNFAIP3-209ENST00000619035 TBCBQ99426 244 aa13.26□□□□□ -0.29
TNFAIP3-209ENST00000619035 PSD3Q9NYI0 1048 aa13.26□□□□□ -0.29
TNFAIP3-209ENST00000619035 PRDM4Q9UKN5 801 aa13.26□□□□□ -0.29
TNFAIP3-209ENST00000619035 DNPEPQ9ULA0 475 aa13.26□□□□□ -0.29
TNFAIP3-209ENST00000619035 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.25□□□□□ -0.29
TNFAIP3-209ENST00000619035 LIASO43766 372 aa13.25□□□□□ -0.29
TNFAIP3-209ENST00000619035 UPP2O95045 317 aa13.25□□□□□ -0.29
TNFAIP3-209ENST00000619035 USP17L7P0C7H9 530 aa13.25□□□□□ -0.29
TNFAIP3-209ENST00000619035 RFC2P35250 354 aa13.25□□□□□ -0.29
TNFAIP3-209ENST00000619035 PBX3P40426 434 aa13.25□□□□□ -0.29
TNFAIP3-209ENST00000619035 MATKP42679 507 aa13.25□□□□□ -0.29
TNFAIP3-209ENST00000619035 PTPN9P43378 593 aa13.25□□□□□ -0.29
TNFAIP3-209ENST00000619035 SULT1E1P49888 294 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms