RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 MTF1Q14872 753 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 PDGFRLQ15198 375 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 SKOR2Q2VWA4 1001 aaPredicted RBP8.69□□□□□ -1.02
NEK3-209ENST00000618856 EML3Q32P44 896 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 PMF1Q6P1K2 205 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 MAMSTRQ6ZN01 415 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 GPIHBP1Q8IV16 184 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 CCDC105Q8IYK2 499 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 WDTC1Q8N5D0 677 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 PJA1Q8NG27 643 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 SH3RF2Q8TEC5 729 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 OSCP1Q8WVF1 389 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 ZNF606Q8WXB4 792 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 ZFYVE19Q96K21 471 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 HSFY1Q96LI6 401 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 ERGIC2Q96RQ1 377 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 NELL2Q99435 816 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 KLF16Q9BXK1 252 aaPredicted RBP8.69□□□□□ -1.02
NEK3-209ENST00000618856 SLC4A5Q9BY07 1137 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 NAT10Q9H0A0 1025 aaKnown RBP8.69□□□□□ -1.02
NEK3-209ENST00000618856 GANQ9H2C0 597 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 C8orf33Q9H7E9 229 aaPredicted RBP8.69□□□□□ -1.02
NEK3-209ENST00000618856 TBC1D17Q9HA65 648 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 TRPC7Q9HCX4 862 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 ACP6Q9NPH0 428 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 TLR8Q9NR97 1041 aaKnown RBP8.69□□□□□ -1.02
NEK3-209ENST00000618856 HEBP1Q9NRV9 189 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 GKN1Q9NS71 199 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 THG1LQ9NWX6 298 aaKnown RBP8.69□□□□□ -1.02
NEK3-209ENST00000618856 TAB2Q9NYJ8 693 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 DNAJC12Q9UKB3 198 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 FBXL21Q9UKT6 434 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 PCDHGC3Q9UN70 934 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 CPQQ9Y646 472 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 TICRRQ7Z2Z1 1910 aa8.69□□□□□ -1.02
NEK3-209ENST00000618856 A0A1W2PQH9 124 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 E2F8A0AVK6 867 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 MAN2B1O00754 1011 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 DPYSL4O14531 572 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 TLR5O60602 858 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 CAVIN2O95810 425 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 ZBED1O96006 694 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 CALCAP01258 141 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 ATP1A3P13637 1013 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 CD19P15391 556 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 RPS9P46781 194 aaKnown RBP8.68□□□□□ -1.02
NEK3-209ENST00000618856 TKTL1P51854 596 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 JAM2P57087 298 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 SLC8A3P57103 927 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 RUNX3Q13761 415 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 GAB4Q2WGN9 574 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 ZNF852Q6ZMS4 543 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 HTR3DQ70Z44 454 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 BEND5Q7L4P6 421 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 TMEM110Q86TL2 294 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 RALGPS2Q86X27 583 aaPredicted RBP8.68□□□□□ -1.02
NEK3-209ENST00000618856 DDX42Q86XP3 938 aaKnown RBP eCLIP8.68□□□□□ -1.02
NEK3-209ENST00000618856 CREBRFQ8IUR6 639 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 SUGP1Q8IWZ8 645 aaKnown RBP8.68□□□□□ -1.02
NEK3-209ENST00000618856 YAF2Q8IY57 180 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 ADGRG2Q8IZP9 1017 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 ARHGAP18Q8N392 663 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 AOPEPQ8N6M6 819 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 UBA3Q8TBC4 463 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 IRGQQ8WZA9 623 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 DDX1Q92499 740 aaKnown RBP8.68□□□□□ -1.02
NEK3-209ENST00000618856 SECISBP2LQ93073 1101 aaKnown RBP8.68□□□□□ -1.02
NEK3-209ENST00000618856 STK33Q9BYT3 514 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 VPS16Q9H269 839 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 LHX5Q9H2C1 402 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 LTB4R2Q9NPC1 389 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 CNGB3Q9NQW8 809 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 GTSE1Q9NYZ3 720 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 HESX1Q9UBX0 185 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 CYTH4Q9UIA0 394 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 MTF2Q9Y483 593 aaPredicted RBP8.68□□□□□ -1.02
NEK3-209ENST00000618856 FHOD1Q9Y613 1164 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 PIAS3Q9Y6X2 628 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 F5P12259 2224 aa8.68□□□□□ -1.02
NEK3-209ENST00000618856 SYCE3A1L190 88 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 YJEFN3A6XGL0 299 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 SMTNL1A8MU46 457 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 E7ENQ6 273 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 F8VZ95 297 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 SPECC1L-ADORA2AF8WAN1 911 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 TRDMT1O14717 391 aaKnown RBP8.67□□□□□ -1.02
NEK3-209ENST00000618856 EPHB6O15197 1021 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 MED7O43513 233 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 GALR2O43603 387 aaPredicted RBP8.67□□□□□ -1.02
NEK3-209ENST00000618856 TBX18O95935 607 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 FYNP06241 537 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 CHRNB1P11230 501 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 RARGP13631 454 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 COL9A1P20849 921 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 TARSP26639 723 aaKnown RBP8.67□□□□□ -1.02
NEK3-209ENST00000618856 GNA15P30679 374 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 CTHP32929 405 aa8.67□□□□□ -1.02
NEK3-209ENST00000618856 CDH5P33151 784 aaPredicted RBP8.67□□□□□ -1.02
NEK3-209ENST00000618856 ATP5C1P36542 298 aaKnown RBP8.67□□□□□ -1.02
NEK3-209ENST00000618856 MAGEA9P43362 315 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms