RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 CACNG4Q9UBN1 327 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 TSPAN16Q9UKR8 245 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 KAT6AQ92794 2004 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 ZNF236Q9UL36 1845 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 MYADML2A6NDP7 307 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 TCP11X1B4DZS4 312 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 E5RJQ4 531 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 RECQL4O94761 1208 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 CTGFP29279 349 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 PTDSS1P48651 473 aaKnown RBP11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 YWHAEP62258 255 aaKnown RBP11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 MAP2K5Q13163 448 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 MTM1Q13496 603 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 PTK6Q13882 451 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 MFSD10Q14728 455 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 DBN1Q16643 649 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 TSNAXIP1Q2TAA8 658 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 HP1BP3Q5SSJ5 553 aaPredicted RBP11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 ZNF618Q5T7W0 954 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 RHBDF2Q6PJF5 856 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 ACOT1Q86TX2 421 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 SLCO2A1Q92959 643 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 NUDCD1Q96RS6 583 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 ZNF518BQ9C0D4 1074 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 PREBQ9HCU5 417 aa11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 MTRF1LQ9UGC7 380 aaKnown RBP11.92□□□□□ -0.5
PCDHGA9-202ENST00000616887 hCG_1818297A0A087WSY0 165 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 PFKMP08237 780 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 MYL3P08590 195 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 ATF2P15336 505 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 ACADSP16219 412 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 GM2AP17900 193 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 GRM5P41594 1212 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 CDKN2BP42772 138 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 MAGEA10P43363 369 aaPredicted RBP11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 CDO1Q16878 200 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 C15orf59Q2T9L4 293 aaPredicted RBP11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 MUM1Q2TAK8 710 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 PPP1R26Q5T8A7 1209 aaPredicted RBP11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 FAM102AQ5T9C2 384 aaPredicted RBP11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 GSTA5Q7RTV2 222 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 IFNL1Q8IU54 200 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 DNAJC5GQ8N7S2 189 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 IFT43Q96FT9 208 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 RAB3IPQ96QF0 476 aaPredicted RBP11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 LHX5Q9H2C1 402 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 RXFP1Q9HBX9 757 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 ZFYVE28Q9HCC9 887 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 GALNT8Q9NY28 637 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 CTNNAL1Q9UBT7 734 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 SCOCQ9UIL1 159 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 PIN4Q9Y237 131 aaKnown RBP11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 C3orf70A6NLC5 250 aaPredicted RBP11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 LIASO43766 372 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 ATP6V1G1O75348 118 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 RBP5P82980 135 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 LONRF1Q17RB8 773 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 ZNF410Q86VK4 478 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 SNF8Q96H20 258 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 SNX27Q96L92 541 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 RMDN2Q96LZ7 410 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 PEBP4Q96S96 227 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 TMEM121Q9BTD3 319 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 CCDC134Q9H6E4 229 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 VRTNQ9H8Y1 702 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 ITGA11Q9UKX5 1188 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 BARX2Q9UMQ3 279 aaPredicted RBP11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 PHF24Q9UPV7 400 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 CITO14578 2027 aa11.91□□□□□ -0.5
PCDHGA9-202ENST00000616887 TRIP12Q14669 1992 aaPredicted RBP11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 SIGLEC16A6NMB1 481 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 MED7O43513 233 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 GAS8O95995 478 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 NUDT17P0C025 328 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 DARSP14868 501 aaKnown RBP11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 GSTT1P30711 240 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 GDF10P55107 478 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 PIGHQ14442 188 aaPredicted RBP11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 CNGA2Q16280 664 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 CCNG2Q16589 344 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 P3H1Q32P28 736 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 SLC27A1Q6PCB7 646 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 FAM183BPQ6ZVS7 135 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 ZNF365Q70YC5 407 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 TTC30AQ86WT1 665 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 CCNJLQ8IV13 435 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 HSPH1Q92598 858 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 PGM2Q96G03 612 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 TRAPPC9Q96Q05 1148 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 B3GNT5Q9BYG0 378 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 GCOM2Q9BZD3 368 aaPredicted RBP11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 ARL2BPQ9Y2Y0 163 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 MEIS3P2A8K0S8 358 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 E7ENQ6 273 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 SPTLC1O15269 473 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 IFNB1P01574 187 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 RARGP13631 454 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 KLRC2P26717 231 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 ATICP31939 592 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 TM4SF4P48230 202 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms