RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 ZNF782Q6ZMW2 699 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 RINLQ6ZS11 566 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 SRGAP1Q7Z6B7 1085 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 NEK8Q86SG6 692 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 RAB11FIP4Q86YS3 637 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 IZUMO1Q8IYV9 350 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 SPARTQ8N0X7 666 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 MPP5Q8N3R9 675 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 XAGE5Q8WWM1 108 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 SPSB4Q96A44 273 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 SNX18Q96RF0 628 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 THAP7Q9BT49 309 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 DPCDQ9BVM2 203 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 C22orf23Q9BZE7 217 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 ZCWPW1Q9H0M4 648 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 DHX36Q9H2U1 1008 aaKnown RBP3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 EBF3Q9H4W6 596 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 ATP6V0A4Q9HBG4 840 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 CCNL1Q9UK58 526 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 RPS6KL1Q9Y6S9 549 aa3.11□□□□□ -1.91
HMGB1P24-202ENST00000615653 LOC102723971A0A1B0GUV8 181 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 TRIM43BA6NCK2 446 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 TISP43B9A030 160 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 POC1B-GALNT4F8VUJ3 575 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 hCG_1984214I3L0E3 225 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 PSMD9O00233 223 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 PPP6CO00743 305 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 TBX3O15119 743 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 EPB41L2O43491 1005 aaKnown RBP3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 HRGP04196 525 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 ADORA2AP29274 412 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 EPHA3P29320 983 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 EPHB2P29323 1055 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 MTHFSP49914 203 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 BCAT1P54687 386 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 CYP4F2P78329 520 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 SP2Q02086 613 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 LAMB3Q13751 1172 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 CCNIQ14094 377 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 ZIK1Q3SY52 487 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 TMEM119Q4V9L6 283 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 DCAF12L1Q5VU92 463 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 KIRREL2Q6UWL6 708 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 NAPRTQ6XQN6 538 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 ZNF280BQ86YH2 543 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 SFTPA1Q8IWL2 248 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 GALNT4Q8N4A0 578 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 SIRT6Q8N6T7 355 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 CYP2W1Q8TAV3 490 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 DENND1AQ8TEH3 1009 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 SMCR8Q8TEV9 937 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 MAML1Q92585 1016 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 TRIM43Q96BQ3 446 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 ZNF668Q96K58 619 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 NT5C1BQ96P26 610 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 LRRC27Q9C0I9 530 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 MAP3K20Q9NYL2 800 aaKnown RBP3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 TFCP2L1Q9NZI6 479 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 AFF4Q9UHB7 1163 aaKnown RBP3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 TPCN1Q9ULQ1 816 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 L1RE1Q9UN81 338 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 MRPS17Q9Y2R5 130 aaKnown RBP3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 SNX14Q9Y5W7 946 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 CDY1Q9Y6F8 540 aa3.1□□□□□ -1.91
HMGB1P24-202ENST00000615653 NOTCH3Q9UM47 2321 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 PRRT4C9JH25 899 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 BTBD19C9JJ37 291 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 SMIM22K7EJ46 135 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 PPEF2O14830 753 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 ADAMTS3O15072 1205 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 INMTO95050 263 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 ZBED1O96006 694 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 BRAFP15056 766 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 RPL17P18621 184 aaKnown RBP3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 ATF3P18847 181 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 PRKAR1BP31321 381 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 GKP32189 559 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 CASP2P42575 452 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 TRAPPC10P48553 1259 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 FAM193AP78312 1265 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 E2F1Q01094 437 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 FHL3Q13643 280 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 MLC1Q15049 377 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 CYP1B1Q16678 543 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 ZNF260Q3ZCT1 412 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 SWSAP1Q6NVH7 229 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 APOA5Q6Q788 366 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 CATSPERGQ6ZRH7 1159 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 CAND1Q86VP6 1230 aaKnown RBP3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 MICU3Q86XE3 530 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 SDR16C5Q8N3Y7 309 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 GALNT16Q8N428 558 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 TERB1Q8NA31 727 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 TEX19Q8NA77 164 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 IPCEF1Q8WWN9 437 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 LRTOMTQ8WZ04 291 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 RAPGEF4Q8WZA2 1011 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 WBP1Q96G27 269 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 ASB2Q96Q27 587 aa3.09□□□□□ -1.91
HMGB1P24-202ENST00000615653 FYTTD1Q96QD9 318 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms