RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 DLGAP5Q15398 846 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 TBCCQ15814 346 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 METTL21CQ5VZV1 264 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 KCTD1Q719H9 257 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 ZFPM1Q8IX07 1006 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 CENPSQ8N2Z9 138 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 KLHL25Q9H0H3 589 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 RBM38Q9H0Z9 239 aaKnown RBP10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 PPCSQ9HAB8 311 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 PARVGQ9HBI0 331 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 NRAPQ86VF7 1730 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 TCP10L2B9ZVM9 353 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 ONECUT3O60422 494 aaPredicted RBP10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 ZBED1O96006 694 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 SERPINA6P08185 405 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 AKR1B1P15121 316 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 S100A1P23297 94 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 NSFP46459 744 aaKnown RBP10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 MFAP3P55082 362 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 DCAF6Q58WW2 860 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 SLC30A10Q6XR72 485 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 C14orf80Q86SX3 495 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 TRIM11Q96F44 468 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 KCNK16Q96T55 309 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 C11orf70Q9BRQ4 267 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 DDX4Q9NQI0 724 aaKnown RBP10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 AGPAT3Q9NRZ7 376 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 GID8Q9NWU2 228 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 STRIP2Q9ULQ0 834 aa10.76□□□□□ -0.69
TNFAIP3-208ENST00000615468 ARHGEF37A1IGU5 675 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 DENND3A2RUS2 1198 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 CYP11B1P15538 503 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 NAT1P18440 290 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 MX2P20592 715 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 PHKA2P46019 1235 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 FMO1Q01740 532 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 ZNF423Q2M1K9 1284 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 CCDC153Q494R4 210 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 ADGRD1Q6QNK2 874 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 POTEAQ6S8J7 498 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 CCDC33Q8N5R6 958 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 RSAD2Q8WXG1 361 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 DHX38Q92620 1227 aaKnown RBP10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 MASTLQ96GX5 879 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 TDRD3Q9H7E2 651 aaKnown RBP10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 PSMD13Q9UNM6 376 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 ESYT2A0FGR8 921 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 KLHL2O95198 593 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 FDX1P10109 184 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 CDK9P50750 372 aaKnown RBP10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 VAMP7P51809 220 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 BMPR2Q13873 1038 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 FAM182AQ5T1J6 154 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 SP8Q8IXZ3 490 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 BORCS5Q969J3 196 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 PLEKHA8Q96JA3 519 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 MMP19Q99542 508 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 SEMA6AQ9H2E6 1030 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 RAB26Q9ULW5 256 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 AGTPBP1Q9UPW5 1226 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 DNAJC16Q9Y2G8 782 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 GOLGA8TH3BQL2 631 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 WDR46O15213 610 aaKnown RBP10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 DENRO43583 198 aaKnown RBP10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 NOL3O60936 208 aaKnown RBP10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 DGKIO75912 1065 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 FAM155BO75949 473 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 WEE2P0C1S8 567 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 MCF2P10911 925 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 CCDC130P13994 396 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 SLFN12Q8IYM2 578 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 ZNF512Q96ME7 567 aaPredicted RBP10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 TMEM79Q9BSE2 394 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 ACSS3Q9H6R3 686 aa10.75□□□□□ -0.69
TNFAIP3-208ENST00000615468 TISP43B9A030 160 aa10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 F5H6K3 240 aa10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 CNOT3O75175 753 aaKnown RBP10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 LYPLA1O75608 230 aaPredicted RBP10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 KRT37O76014 449 aa10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 FUCA1P04066 466 aa10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 KLRC2P26717 231 aa10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 TAS2R40P59535 323 aa10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 PPP3CAQ08209 521 aa10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 CD300CQ08708 224 aa10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 NFX1Q12986 1120 aaKnown RBP10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 NR1D2Q14995 579 aa10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 ACAD10Q6JQN1 1059 aa10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 POLNQ7Z5Q5 900 aa10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 CHSY1Q86X52 802 aa10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 RELL1Q8IUW5 271 aa10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 ZNF276Q8N554 614 aa10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 TMCO5AQ8N6Q1 288 aa10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 CATSPER1Q8NEC5 780 aa10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 AGR3Q8TD06 166 aa10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 HELQQ8TDG4 1101 aa10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 SREK1Q8WXA9 508 aaKnown RBP10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 ATP2A3Q93084 1043 aa10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 CMTM5Q96DZ9 223 aa10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 CCDC106Q9BWC9 280 aa10.74□□□□□ -0.69
TNFAIP3-208ENST00000615468 SSU72Q9NP77 194 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms