RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 ALG3Q92685 438 aa10.4□□□□□ -0.74
GGA3-221ENST00000614198 FGFR1OP2Q9NVK5 253 aa10.4□□□□□ -0.74
GGA3-221ENST00000614198 ANKRD62A6NC57 917 aa10.4□□□□□ -0.75
GGA3-221ENST00000614198 GOLGA8SH3BPF8 625 aa10.4□□□□□ -0.75
GGA3-221ENST00000614198 PEX11AO75192 247 aa10.4□□□□□ -0.75
GGA3-221ENST00000614198 CCDC130P13994 396 aa10.4□□□□□ -0.75
GGA3-221ENST00000614198 POLE2P56282 527 aa10.4□□□□□ -0.75
GGA3-221ENST00000614198 NOMO3P69849 1222 aa10.4□□□□□ -0.75
GGA3-221ENST00000614198 TAF5Q15542 800 aa10.4□□□□□ -0.75
GGA3-221ENST00000614198 TSNAXIP1Q2TAA8 658 aa10.4□□□□□ -0.75
GGA3-221ENST00000614198 DCAF4L1Q3SXM0 396 aa10.4□□□□□ -0.75
GGA3-221ENST00000614198 ATP13A4Q4VNC1 1196 aa10.4□□□□□ -0.75
GGA3-221ENST00000614198 C1QTNF12Q5T7M4 302 aa10.4□□□□□ -0.75
GGA3-221ENST00000614198 RNF220Q5VTB9 566 aa10.4□□□□□ -0.75
GGA3-221ENST00000614198 ACAD10Q6JQN1 1059 aa10.4□□□□□ -0.75
GGA3-221ENST00000614198 IRGCQ6NXR0 463 aa10.4□□□□□ -0.75
GGA3-221ENST00000614198 NME8Q8N427 588 aa10.4□□□□□ -0.75
GGA3-221ENST00000614198 RASGEF1CQ8N431 466 aa10.4□□□□□ -0.75
GGA3-221ENST00000614198 ENDOVQ8N8Q3 282 aaKnown RBP10.4□□□□□ -0.75
GGA3-221ENST00000614198 UTP4Q969X6 686 aaKnown RBP10.4□□□□□ -0.75
GGA3-221ENST00000614198 RHOBTB2Q9BYZ6 727 aa10.4□□□□□ -0.75
GGA3-221ENST00000614198 PRDM16Q9HAZ2 1276 aa10.4□□□□□ -0.75
GGA3-221ENST00000614198 DNAJC17Q9NVM6 304 aaKnown RBP10.4□□□□□ -0.75
GGA3-221ENST00000614198 CNTN3Q9P232 1028 aa10.4□□□□□ -0.75
GGA3-221ENST00000614198 PRKAG3Q9UGI9 489 aa10.4□□□□□ -0.75
GGA3-221ENST00000614198 FRMPD3Q5JV73 1810 aa10.4□□□□□ -0.75
GGA3-221ENST00000614198 CLDN5O00501 218 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 ZSCAN9O15535 394 aaPredicted RBP10.39□□□□□ -0.75
GGA3-221ENST00000614198 GSTA2P09210 222 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 FAM163BP0C2L3 166 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 TMEM253P0C7T8 217 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 CST5P28325 142 aaPredicted RBP10.39□□□□□ -0.75
GGA3-221ENST00000614198 PMS2P54278 862 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 GPC5P78333 572 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 PPP1R26Q5T8A7 1209 aaPredicted RBP10.39□□□□□ -0.75
GGA3-221ENST00000614198 DEFB128Q7Z7B8 93 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 NT5DC3Q86UY8 548 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 MCOLN2Q8IZK6 566 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 EMC1Q8N766 993 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 STKLD1Q8NE28 680 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 OR6B3Q8NGW1 331 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 MAIP1Q8WWC4 291 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 CPXM1Q96SM3 734 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 FAM118BQ9BPY3 351 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 TMEM109Q9BVC6 243 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 BCO2Q9BYV7 579 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 STMN4Q9H169 189 aaPredicted RBP10.39□□□□□ -0.75
GGA3-221ENST00000614198 RMI1Q9H9A7 625 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 DLGAP2Q9P1A6 1054 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 USTQ9Y2C2 406 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 ALG6Q9Y672 507 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 BPTFQ12830 3046 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 KPNA6O60684 536 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 NBNO60934 754 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 CILPO75339 1184 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 UNC5CO95185 931 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 COMTP21964 271 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 BCAR1P56945 870 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 RBP5P82980 135 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 POU5F1Q01860 360 aaKnown RBP10.39□□□□□ -0.75
GGA3-221ENST00000614198 TNFAIP8L3Q5GJ75 292 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 KIAA0319Q5VV43 1072 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 VSIG1Q86XK7 387 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 ZNF280BQ86YH2 543 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 DNAJC9Q8WXX5 260 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 RFFLQ8WZ73 363 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 RNF25Q96BH1 459 aaPredicted RBP10.39□□□□□ -0.75
GGA3-221ENST00000614198 FAM136AQ96C01 138 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 B3GALT6Q96L58 329 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 PLEKHG4BQ96PX9 1271 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 B3GNT5Q9BYG0 378 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 ERVK-5Q9HDB9 667 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 ZNF232Q9UNY5 417 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 TTC3P53804 2025 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 TCRBV7S2A1N4TA0A589 114 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 TCP11X1B4DZS4 312 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 CREB3O43889 395 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 CYP1A1P04798 512 aaPredicted RBP10.39□□□□□ -0.75
GGA3-221ENST00000614198 TBXAS1P24557 533 aaPredicted RBP10.39□□□□□ -0.75
GGA3-221ENST00000614198 NSFP46459 744 aaKnown RBP10.39□□□□□ -0.75
GGA3-221ENST00000614198 BRCC3P46736 316 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 TXNRD3NBQ6F5E7 133 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 RSPH3Q86UC2 560 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 ZNF564Q8TBZ8 553 aaPredicted RBP10.39□□□□□ -0.75
GGA3-221ENST00000614198 KBTBD7Q8WVZ9 684 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 ZDHHC18Q9NUE0 388 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 ANAPC7Q9UJX3 599 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 DAAM1Q9Y4D1 1078 aa10.39□□□□□ -0.75
GGA3-221ENST00000614198 TPP2P29144 1249 aaPredicted RBP10.38□□□□□ -0.75
GGA3-221ENST00000614198 ADORA2BP29275 332 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 MNX1P50219 401 aaPredicted RBP10.38□□□□□ -0.75
GGA3-221ENST00000614198 LILRA4P59901 499 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 OGDHQ02218 1023 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 CCDC15Q0P6D6 951 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 PTP4A2Q12974 167 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 PTPN20Q4JDL3 420 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 SH3PXD2AQ5TCZ1 1133 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 MON1BQ7L1V2 547 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 ANKS1BQ7Z6G8 1248 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 OSTM1Q86WC4 334 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms