RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	C12orf40	Q86WS4	652 aa		11.79	□□□□□ -0.52
CBWD1-222	ENST00000613508	SFTPA1	Q8IWL2	248 aa		11.79	□□□□□ -0.52
CBWD1-222	ENST00000613508	CCDC33	Q8N5R6	958 aa		11.79	□□□□□ -0.52
CBWD1-222	ENST00000613508	ALLC	Q8N6M5	410 aa		11.79	□□□□□ -0.52
CBWD1-222	ENST00000613508	ZMIZ2	Q8NF64	920 aa		11.79	□□□□□ -0.52
CBWD1-222	ENST00000613508	MDGA1	Q8NFP4	955 aa		11.79	□□□□□ -0.52
CBWD1-222	ENST00000613508	SMO	Q99835	787 aa		11.79	□□□□□ -0.52
CBWD1-222	ENST00000613508	SMOC1	Q9H4F8	434 aa		11.79	□□□□□ -0.52
CBWD1-222	ENST00000613508	FBXO44	Q9H4M3	255 aa		11.79	□□□□□ -0.52
CBWD1-222	ENST00000613508	CCSER2	Q9H7U1	834 aa		11.79	□□□□□ -0.52
CBWD1-222	ENST00000613508	ARHGEF4	Q9NR80	690 aa		11.79	□□□□□ -0.52
CBWD1-222	ENST00000613508	KRT82	Q9NSB4	513 aa		11.79	□□□□□ -0.52
CBWD1-222	ENST00000613508	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.79	□□□□□ -0.52
CBWD1-222	ENST00000613508	TRAF3IP3	Q9Y228	551 aa		11.79	□□□□□ -0.52
CBWD1-222	ENST00000613508	ASPM	Q8IZT6	3477 aa		11.79	□□□□□ -0.52
CBWD1-222	ENST00000613508	MAP1B	P46821	2468 aa	Known RBP	11.79	□□□□□ -0.52
CBWD1-222	ENST00000613508	ZZEF1	O43149	2961 aa		11.79	□□□□□ -0.52
CBWD1-222	ENST00000613508	CHD6	Q8TD26	2715 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	LNP1	A1A4G5	178 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	ANTXRL	A6NF34	631 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	SGK1	O00141	431 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	SCAMP3	O14828	347 aa	Known RBP	11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	GREM1	O60565	184 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	ADAM23	O75077	832 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	KIF20A	O95235	890 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	HNRNPL	P14866	589 aa	Known RBP eCLIP	11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	PFKFB1	P16118	471 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	PML	P29590	882 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	GBP1	P32455	592 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	NDST1	P52848	882 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	CREB5	Q02930	508 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	IFRD2	Q12894	506 aa	Predicted RBP	11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	SPDYC	Q5MJ68	293 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	EOGT	Q5NDL2	527 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	LY6G5C	Q5SRR4	150 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	RNF43	Q68DV7	783 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	TCEAL6	Q6IPX3	200 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	HTR3D	Q70Z44	454 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	SLC2A14	Q8TDB8	520 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	TCEAL3	Q969E4	200 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	MED10	Q9BTT4	135 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	PNPLA8	Q9NP80	782 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	POLM	Q9NP87	494 aa	Predicted RBP	11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	CYLD	Q9NQC7	956 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	GMIP	Q9P107	970 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	FRMD4B	Q9Y2L6	1034 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	STARD13	Q9Y3M8	1113 aa		11.78	□□□□□ -0.52
CBWD1-222	ENST00000613508	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	TLR5	O60602	858 aa		11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	BEST1	O76090	585 aa		11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	RHOBTB3	O94955	611 aa		11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	KLF8	O95600	359 aa	Predicted RBP	11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	CCDC130	P13994	396 aa		11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	BCKDHB	P21953	392 aa		11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	P2RY2	P41231	377 aa		11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	PGF	P49763	221 aa		11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	KLHDC10	Q6PID8	442 aa		11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	SCARA5	Q6ZMJ2	495 aa		11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	TRMT11	Q7Z4G4	463 aa	Known RBP	11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	BBS7	Q8IWZ6	715 aa		11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	ZNF276	Q8N554	614 aa		11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	C12orf29	Q8N999	325 aa		11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	TXNDC5	Q8NBS9	432 aa	Known RBP	11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	WHAMM	Q8TF30	809 aa		11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	HNRNPAB	Q99729	332 aa	Known RBP	11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	EDEM2	Q9BV94	578 aa		11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	TPSD1	Q9BZJ3	242 aa		11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	CYP3A43	Q9HB55	503 aa		11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	TLR8	Q9NR97	1041 aa	Known RBP	11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	SPHK2	Q9NRA0	654 aa		11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	DEC1	Q9P2X7	70 aa		11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	HMGXB4	Q9UGU5	601 aa		11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	EVL	Q9UI08	416 aa	Predicted RBP	11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	ANGPTL2	Q9UKU9	493 aa		11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	SCML2	Q9UQR0	700 aa		11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508	SH3BP1	Q9Y3L3	701 aa		11.77	□□□□□ -0.53
CBWD1-222	ENST00000613508		A0A1B0GVL5	298 aa		11.76	□□□□□ -0.53
CBWD1-222	ENST00000613508	HHLA1	C9JL84	531 aa		11.76	□□□□□ -0.53
CBWD1-222	ENST00000613508	KHNYN	O15037	678 aa	Known RBP	11.76	□□□□□ -0.53
CBWD1-222	ENST00000613508	CALU	O43852	315 aa	Predicted RBP	11.76	□□□□□ -0.53
CBWD1-222	ENST00000613508	CACNG3	O60359	315 aa		11.76	□□□□□ -0.53
CBWD1-222	ENST00000613508	TULP3	O75386	442 aa		11.76	□□□□□ -0.53
CBWD1-222	ENST00000613508	KCNK5	O95279	499 aa		11.76	□□□□□ -0.53
CBWD1-222	ENST00000613508	HLA-DRA	P01903	254 aa		11.76	□□□□□ -0.53
CBWD1-222	ENST00000613508	FAM200B	P0CF97	657 aa		11.76	□□□□□ -0.53
CBWD1-222	ENST00000613508	TRIM21	P19474	475 aa	Known RBP	11.76	□□□□□ -0.53
CBWD1-222	ENST00000613508	HOXD12	P35452	270 aa		11.76	□□□□□ -0.53
CBWD1-222	ENST00000613508	TIE1	P35590	1138 aa		11.76	□□□□□ -0.53
CBWD1-222	ENST00000613508	PIK3CA	P42336	1068 aa		11.76	□□□□□ -0.53
CBWD1-222	ENST00000613508	DPP6	P42658	865 aa		11.76	□□□□□ -0.53
CBWD1-222	ENST00000613508	VAMP7	P51809	220 aa		11.76	□□□□□ -0.53
CBWD1-222	ENST00000613508	MAP3K7CL	P57077	242 aa		11.76	□□□□□ -0.53
CBWD1-222	ENST00000613508	BYSL	Q13895	437 aa	Known RBP	11.76	□□□□□ -0.53
CBWD1-222	ENST00000613508	MAP7D1	Q3KQU3	841 aa		11.76	□□□□□ -0.53
CBWD1-222	ENST00000613508	EMC10	Q5UCC4	262 aa		11.76	□□□□□ -0.53
CBWD1-222	ENST00000613508	BTBD8	Q5XKL5	378 aa		11.76	□□□□□ -0.53
CBWD1-222	ENST00000613508	CLEC20A	Q6ZU45	233 aa		11.76	□□□□□ -0.53
CBWD1-222	ENST00000613508	NUDT18	Q6ZVK8	323 aa		11.76	□□□□□ -0.53
CBWD1-222	ENST00000613508	INTS8	Q75QN2	995 aa	Known RBP	11.76	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms