RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 RNF17Q9BXT8 1623 aaKnown RBP9.04□□□□□ -0.96
TTC28-208ENST00000612946 A0A1W2PQ72 361 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 DNAJA2O60884 412 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 APRTP07741 180 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 IL2RBP14784 551 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 PPIL2Q13356 520 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 DNAAF5Q86Y56 855 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 FBXW8Q8N3Y1 598 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 FAM149B1Q96BN6 582 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 VCPIP1Q96JH7 1222 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 C12orf4Q9NQ89 552 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 ZNF446Q9NWS9 450 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 SDR42E2A6NKP2 422 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 IFNGR2P38484 337 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 GALCP54803 685 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 FAM92BQ6ZTR7 304 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 RNF139Q8WU17 664 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 TAMM41Q96BW9 452 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 ZHX1-C8orf76Q96EF9 292 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 MSTO1Q9BUK6 570 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 CORO2BQ9UQ03 480 aa9.04□□□□□ -0.96
TTC28-208ENST00000612946 CCND2P30279 289 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 PSMD4P55036 377 aaKnown RBP9.03□□□□□ -0.96
TTC28-208ENST00000612946 CDH6P55285 790 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 ZNF211Q13398 564 aaPredicted RBP9.03□□□□□ -0.96
TTC28-208ENST00000612946 NIPAL1Q6NVV3 410 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 TMEM270Q6UE05 265 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 SH3BP5LQ7L8J4 393 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 IFT43Q96FT9 208 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 SEPT9Q9UHD8 586 aaPredicted RBP9.03□□□□□ -0.96
TTC28-208ENST00000612946 BTNL10A8MVZ5 291 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 SIN3BO75182 1162 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 ATF4P18848 351 aaPredicted RBP9.03□□□□□ -0.96
TTC28-208ENST00000612946 FXR1P51114 621 aaKnown RBP eCLIP9.03□□□□□ -0.96
TTC28-208ENST00000612946 KRT28Q7Z3Y7 464 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 EXD1Q8NHP7 514 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 HEXIM2Q96MH2 286 aaKnown RBP9.03□□□□□ -0.96
TTC28-208ENST00000612946 FAM118BQ9BPY3 351 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 CLIC5Q9NZA1 410 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 SNX7Q9UNH6 387 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 DDX3XO00571 662 aaKnown RBP eCLIP9.03□□□□□ -0.96
TTC28-208ENST00000612946 PCCAP05165 728 aaPredicted RBP9.03□□□□□ -0.96
TTC28-208ENST00000612946 FAUP35544 74 aaKnown RBP9.03□□□□□ -0.96
TTC28-208ENST00000612946 FMO5P49326 533 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 VAC14Q08AM6 782 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 HERC3Q15034 1050 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 RFT1Q96AA3 541 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 KIAA1683Q9H0B3 1180 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 IQGAP1P46940 1657 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 NOTOA8MTQ0 251 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 SFNP31947 248 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 CENPIQ92674 756 aaPredicted RBP9.03□□□□□ -0.96
TTC28-208ENST00000612946 PAFAH2Q99487 392 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 EPN2O95208 641 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 EIF2AK2P19525 551 aaKnown RBP9.03□□□□□ -0.96
TTC28-208ENST00000612946 OGNP20774 298 aaKnown RBP9.03□□□□□ -0.96
TTC28-208ENST00000612946 GNL1P36915 607 aaPredicted RBP9.03□□□□□ -0.96
TTC28-208ENST00000612946 VBP1P61758 197 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 CDH18Q13634 790 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 PEG10Q86TG7 708 aaKnown RBP9.03□□□□□ -0.96
TTC28-208ENST00000612946 FCGR1BQ92637 280 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 ERMAPQ96PL5 475 aaPredicted RBP9.03□□□□□ -0.96
TTC28-208ENST00000612946 CDC42EP4Q9H3Q1 356 aaKnown RBP9.03□□□□□ -0.96
TTC28-208ENST00000612946 RPF1Q9H9Y2 349 aaKnown RBP9.03□□□□□ -0.96
TTC28-208ENST00000612946 SUGCTQ9HAC7 445 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 CD320Q9NPF0 282 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 HEY1Q9Y5J3 304 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 FAM220BPB1ANY3 271 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 CLDN3O15551 220 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 RIPK2O43353 540 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 ARHGEF6Q15052 776 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 GLYCTKQ8IVS8 523 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 POC5Q8NA72 575 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 JARID2Q92833 1246 aaPredicted RBP9.03□□□□□ -0.96
TTC28-208ENST00000612946 FUCA2Q9BTY2 467 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 TMEM165Q9HC07 324 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 GPN1Q9HCN4 374 aaPredicted RBP9.03□□□□□ -0.96
TTC28-208ENST00000612946 RGS18Q9NS28 235 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 CROTQ9UKG9 612 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 MADDQ8WXG6 1647 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 SLC9A3P48764 834 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 MAPKAPK2P49137 400 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 TFAMQ00059 246 aaKnown RBP9.03□□□□□ -0.96
TTC28-208ENST00000612946 POLD3Q15054 466 aaPredicted RBP9.03□□□□□ -0.96
TTC28-208ENST00000612946 MDH1BQ5I0G3 518 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 C6orf52Q5T4I8 152 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 ERI1Q8IV48 349 aaKnown RBP9.03□□□□□ -0.96
TTC28-208ENST00000612946 CHP1Q99653 195 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 HEMGNQ9BXL5 484 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 ANO3Q9BYT9 981 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 IDO1P14902 403 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 CYP51A1Q16850 503 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 SYTL1Q8IYJ3 562 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 ENGASEQ8NFI3 743 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 SPATA18Q8TC71 538 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 KCNB2Q92953 911 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 PCDH9Q9HC56 1237 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 VPS4AQ9UN37 437 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 PSMD13Q9UNM6 376 aa9.03□□□□□ -0.96
TTC28-208ENST00000612946 LRRC7Q96NW7 1537 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms