RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 SLC28A3Q9HAS3 691 aa18.38■□□□□ 0.53
SREK1-216ENST00000612404 POPDC2Q9HBU9 364 aa18.38■□□□□ 0.53
SREK1-216ENST00000612404 NGRNQ9NPE2 291 aaKnown RBP18.38■□□□□ 0.53
SREK1-216ENST00000612404 CAPN9O14815 690 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 TGM5O43548 720 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 LTFP02788 710 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 GLI1P08151 1106 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 DESP17661 470 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 CXCR5P32302 372 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 MAN1A1P33908 653 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 IRS1P35568 1242 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 ALDH1A3P47895 512 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 USP46P62068 366 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 ATP11AP98196 1134 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 CDO1Q16878 200 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 C15orf59Q2T9L4 293 aaPredicted RBP18.37■□□□□ 0.53
SREK1-216ENST00000612404 DCAF6Q58WW2 860 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 PAPD7Q5XG87 772 aaKnown RBP18.37■□□□□ 0.53
SREK1-216ENST00000612404 ARCQ7LC44 396 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 DEFB106AQ8N104 65 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 NIPA2Q8N8Q9 360 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 ARNTL2Q8WYA1 636 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 HES6Q96HZ4 224 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 CNPY3Q9BT09 278 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 ASNSD1Q9NWL6 643 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.37■□□□□ 0.53
SREK1-216ENST00000612404 HSFX1Q9UBD0 423 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 SNX12Q9UMY4 172 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 SAR1BQ9Y6B6 198 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 H3BNC9 293 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 RTN3O95197 1032 aaPredicted RBP18.37■□□□□ 0.53
SREK1-216ENST00000612404 MTMR3Q13615 1198 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 CCDC14Q49A88 953 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 CC2D1AQ6P1N0 951 aaPredicted RBP18.37■□□□□ 0.53
SREK1-216ENST00000612404 BHLHA9Q7RTU4 235 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 SCML4Q8N228 414 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 UBL4BQ8N7F7 174 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 MAGED2Q9UNF1 606 aaPredicted RBP18.37■□□□□ 0.53
SREK1-216ENST00000612404 YIPF1Q9Y548 306 aa18.37■□□□□ 0.53
SREK1-216ENST00000612404 MIF4GDA9UHW6 222 aaKnown RBP18.36■□□□□ 0.53
SREK1-216ENST00000612404 KCNK3O14649 394 aa18.36■□□□□ 0.53
SREK1-216ENST00000612404 SRGAP2O75044 1071 aa18.36■□□□□ 0.53
SREK1-216ENST00000612404 DAB1O75553 588 aa18.36■□□□□ 0.53
SREK1-216ENST00000612404 RNF8O76064 485 aa18.36■□□□□ 0.53
SREK1-216ENST00000612404 MATKP42679 507 aa18.36■□□□□ 0.53
SREK1-216ENST00000612404 CAMK1Q14012 370 aa18.36■□□□□ 0.53
SREK1-216ENST00000612404 SH3PXD2AQ5TCZ1 1133 aa18.36■□□□□ 0.53
SREK1-216ENST00000612404 TCEAL8Q8IYN2 117 aa18.36■□□□□ 0.53
SREK1-216ENST00000612404 NAALADL1Q9UQQ1 740 aa18.36■□□□□ 0.53
SREK1-216ENST00000612404 SLC38A8A6NNN8 435 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 NCAM1P13591 858 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 YWHAQP27348 245 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 GJC1P36383 396 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 YWHAGP61981 247 aaKnown RBP eCLIP18.35■□□□□ 0.53
SREK1-216ENST00000612404 BSPRYQ5W0U4 402 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 CHRDL2Q6WN34 429 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 EDEM1Q92611 657 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 KRT35Q92764 455 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 CD101Q93033 1021 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 FBXO32Q969P5 355 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 OSBPL9Q96SU4 736 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 DDX23Q9BUQ8 820 aaKnown RBP18.35■□□□□ 0.53
SREK1-216ENST00000612404 MAFFQ9ULX9 164 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 SCML2Q9UQR0 700 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 MYO16Q9Y6X6 1858 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 DPYSL4O14531 572 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 FSCN2O14926 492 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 LRCH4O75427 683 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 MARCKSL1P49006 195 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 AMPD2Q01433 879 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 TWF1Q12792 350 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 TAF12Q16514 161 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 SYPL2Q5VXT5 272 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 FAM172AQ8WUF8 416 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 SLC2A13Q96QE2 648 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 INSL5Q9Y5Q6 135 aa18.35■□□□□ 0.53
SREK1-216ENST00000612404 CCDC66A2RUB6 948 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 DDX3YO15523 660 aaKnown RBP18.34■□□□□ 0.53
SREK1-216ENST00000612404 GLUD1P00367 558 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 FYNP06241 537 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 TCF4P15884 667 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 TFE3P19532 575 aaPredicted RBP18.34■□□□□ 0.53
SREK1-216ENST00000612404 CTNNA1P35221 906 aaKnown RBP18.34■□□□□ 0.53
SREK1-216ENST00000612404 NOS2P35228 1153 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 SULT1E1P49888 294 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 TAS2R40P59535 323 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 ACAP1Q15027 740 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 BTBD8Q5XKL5 378 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 RHOT1Q8IXI2 618 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 IL37Q9NZH6 218 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 STAP1Q9ULZ2 295 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 PCDHA3Q9Y5H8 950 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 A0A1W2PQH9 124 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 TCP1P17987 556 aaKnown RBP18.34■□□□□ 0.53
SREK1-216ENST00000612404 PTPN9P43378 593 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 RGS19P49795 217 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 TAF10Q12962 218 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 VEPH1Q14D04 833 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 SLC25A52Q3SY17 297 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 RAB6CQ53S08 254 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms