RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 KRT5P13647 590 aa12.99□□□□□ -0.33
CBWD3-208ENST00000612050 MRE11P49959 708 aa12.99□□□□□ -0.33
CBWD3-208ENST00000612050 CSTF1Q05048 431 aaKnown RBP12.99□□□□□ -0.33
CBWD3-208ENST00000612050 GOLGA7BQ2TAP0 167 aa12.99□□□□□ -0.33
CBWD3-208ENST00000612050 BTBD8Q5XKL5 378 aa12.99□□□□□ -0.33
CBWD3-208ENST00000612050 RSRC2Q7L4I2 434 aaKnown RBP12.99□□□□□ -0.33
CBWD3-208ENST00000612050 CCDC186Q7Z3E2 898 aa12.99□□□□□ -0.33
CBWD3-208ENST00000612050 ALYREFQ86V81 257 aaKnown RBP12.99□□□□□ -0.33
CBWD3-208ENST00000612050 SIX6OS1Q8N1H7 587 aa12.99□□□□□ -0.33
CBWD3-208ENST00000612050 ZMIZ2Q8NF64 920 aa12.99□□□□□ -0.33
CBWD3-208ENST00000612050 ATRIPQ8WXE1 791 aa12.99□□□□□ -0.33
CBWD3-208ENST00000612050 CD101Q93033 1021 aa12.99□□□□□ -0.33
CBWD3-208ENST00000612050 P2RY13Q9BPV8 354 aa12.99□□□□□ -0.33
CBWD3-208ENST00000612050 INTS2Q9H0H0 1204 aaKnown RBP12.99□□□□□ -0.33
CBWD3-208ENST00000612050 LMBRD1Q9NUN5 540 aa12.99□□□□□ -0.33
CBWD3-208ENST00000612050 TSPAN16Q9UKR8 245 aa12.99□□□□□ -0.33
CBWD3-208ENST00000612050 STRIP2Q9ULQ0 834 aa12.99□□□□□ -0.33
CBWD3-208ENST00000612050 XPO1O14980 1071 aaKnown RBP12.98□□□□□ -0.33
CBWD3-208ENST00000612050 ARSAP15289 507 aa12.98□□□□□ -0.33
CBWD3-208ENST00000612050 NBL1P41271 181 aa12.98□□□□□ -0.33
CBWD3-208ENST00000612050 CXCL12P48061 93 aa12.98□□□□□ -0.33
CBWD3-208ENST00000612050 KIF11P52732 1056 aa12.98□□□□□ -0.33
CBWD3-208ENST00000612050 MAN2A1Q16706 1144 aa12.98□□□□□ -0.33
CBWD3-208ENST00000612050 EML3Q32P44 896 aa12.98□□□□□ -0.33
CBWD3-208ENST00000612050 C10orf120Q5SQS8 335 aa12.98□□□□□ -0.33
CBWD3-208ENST00000612050 SPEM1Q8N4L4 309 aa12.98□□□□□ -0.33
CBWD3-208ENST00000612050 ANKRD20A12PQ8NF67 263 aa12.98□□□□□ -0.33
CBWD3-208ENST00000612050 RNF38Q9H0F5 515 aa12.98□□□□□ -0.33
CBWD3-208ENST00000612050 CCSER2Q9H7U1 834 aa12.98□□□□□ -0.33
CBWD3-208ENST00000612050 HPS4Q9NQG7 708 aa12.98□□□□□ -0.33
CBWD3-208ENST00000612050 DNMT3LQ9UJW3 386 aa12.98□□□□□ -0.33
CBWD3-208ENST00000612050 GTPBP10A4D1E9 387 aaKnown RBP12.97□□□□□ -0.33
CBWD3-208ENST00000612050 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.97□□□□□ -0.33
CBWD3-208ENST00000612050 TRDMT1O14717 391 aaKnown RBP12.97□□□□□ -0.33
CBWD3-208ENST00000612050 CYP26A1O43174 497 aa12.97□□□□□ -0.33
CBWD3-208ENST00000612050 ZDHHC11BP0C7U3 371 aa12.97□□□□□ -0.33
CBWD3-208ENST00000612050 SP9P0CG40 484 aa12.97□□□□□ -0.33
CBWD3-208ENST00000612050 IRF1P10914 325 aa12.97□□□□□ -0.33
CBWD3-208ENST00000612050 CHRNB1P11230 501 aa12.97□□□□□ -0.33
CBWD3-208ENST00000612050 RARGP13631 454 aa12.97□□□□□ -0.33
CBWD3-208ENST00000612050 GJA4P35212 333 aa12.97□□□□□ -0.33
CBWD3-208ENST00000612050 PLA2G4AP47712 749 aa12.97□□□□□ -0.33
CBWD3-208ENST00000612050 COG7P83436 770 aa12.97□□□□□ -0.33
CBWD3-208ENST00000612050 MTAPQ13126 283 aa12.97□□□□□ -0.33
CBWD3-208ENST00000612050 EXOC3L4Q17RC7 722 aa12.97□□□□□ -0.33
CBWD3-208ENST00000612050 KLHDC10Q6PID8 442 aa12.97□□□□□ -0.33
CBWD3-208ENST00000612050 RRAGAQ7L523 313 aa12.97□□□□□ -0.33
CBWD3-208ENST00000612050 PIGZQ86VD9 579 aa12.97□□□□□ -0.33
CBWD3-208ENST00000612050 RBBP8NLQ8NC74 664 aaPredicted RBP12.97□□□□□ -0.33
CBWD3-208ENST00000612050 RNF139Q8WU17 664 aa12.97□□□□□ -0.33
CBWD3-208ENST00000612050 SECISBP2LQ93073 1101 aaKnown RBP12.97□□□□□ -0.33
CBWD3-208ENST00000612050 UBE2TQ9NPD8 197 aaPredicted RBP12.97□□□□□ -0.33
CBWD3-208ENST00000612050 CYLDQ9NQC7 956 aa12.97□□□□□ -0.33
CBWD3-208ENST00000612050 OLA1Q9NTK5 396 aaKnown RBP12.97□□□□□ -0.33
CBWD3-208ENST00000612050 CLIC5Q9NZA1 410 aa12.97□□□□□ -0.33
CBWD3-208ENST00000612050 ZNF510Q9Y2H8 683 aa12.97□□□□□ -0.33
CBWD3-208ENST00000612050 PCDHGA2Q9Y5H1 932 aa12.97□□□□□ -0.33
CBWD3-208ENST00000612050 A0A1W2PQH9 124 aa12.96□□□□□ -0.33
CBWD3-208ENST00000612050 PROB1E7EW31 1015 aa12.96□□□□□ -0.33
CBWD3-208ENST00000612050 M0QYV0 167 aa12.96□□□□□ -0.33
CBWD3-208ENST00000612050 GFRA3O60609 400 aa12.96□□□□□ -0.33
CBWD3-208ENST00000612050 USP8P40818 1118 aa12.96□□□□□ -0.33
CBWD3-208ENST00000612050 TKTL1P51854 596 aa12.96□□□□□ -0.33
CBWD3-208ENST00000612050 GAD2Q05329 585 aa12.96□□□□□ -0.33
CBWD3-208ENST00000612050 DPCR1Q3MIW9 517 aa12.96□□□□□ -0.33
CBWD3-208ENST00000612050 TMEM196Q5HYL7 178 aa12.96□□□□□ -0.33
CBWD3-208ENST00000612050 MAMSTRQ6ZN01 415 aa12.96□□□□□ -0.33
CBWD3-208ENST00000612050 PIP4P2Q8N4L2 257 aa12.96□□□□□ -0.33
CBWD3-208ENST00000612050 ACDQ96AP0 544 aa12.96□□□□□ -0.33
CBWD3-208ENST00000612050 DCLK3Q9C098 648 aa12.96□□□□□ -0.33
CBWD3-208ENST00000612050 ANO10Q9NW15 660 aa12.96□□□□□ -0.33
CBWD3-208ENST00000612050 ZSCAN32Q9NX65 697 aa12.96□□□□□ -0.33
CBWD3-208ENST00000612050 RAB23Q9ULC3 237 aa12.96□□□□□ -0.33
CBWD3-208ENST00000612050 SLC8A2Q9UPR5 921 aa12.96□□□□□ -0.33
CBWD3-208ENST00000612050 MUC6Q6W4X9 2439 aa12.96□□□□□ -0.33
CBWD3-208ENST00000612050 HHLA1C9JL84 531 aa12.96□□□□□ -0.34
CBWD3-208ENST00000612050 SART1O43290 800 aaKnown RBP12.96□□□□□ -0.34
CBWD3-208ENST00000612050 ZBED1O96006 694 aa12.96□□□□□ -0.34
CBWD3-208ENST00000612050 ADH5P11766 374 aa12.96□□□□□ -0.34
CBWD3-208ENST00000612050 EEF1GP26641 437 aaKnown RBP12.96□□□□□ -0.34
CBWD3-208ENST00000612050 EIF2DP41214 584 aaKnown RBP12.96□□□□□ -0.34
CBWD3-208ENST00000612050 SNX16P57768 344 aa12.96□□□□□ -0.34
CBWD3-208ENST00000612050 YWHAGP61981 247 aaKnown RBP eCLIP12.96□□□□□ -0.34
CBWD3-208ENST00000612050 PDE4CQ08493 712 aa12.96□□□□□ -0.34
CBWD3-208ENST00000612050 CNGA2Q16280 664 aa12.96□□□□□ -0.34
CBWD3-208ENST00000612050 SMYD5Q6GMV2 418 aa12.96□□□□□ -0.34
CBWD3-208ENST00000612050 TRIM65Q6PJ69 517 aa12.96□□□□□ -0.34
CBWD3-208ENST00000612050 TXNDC11Q6PKC3 985 aa12.96□□□□□ -0.34
CBWD3-208ENST00000612050 LCLAT1Q6UWP7 414 aa12.96□□□□□ -0.34
CBWD3-208ENST00000612050 GPRIN1Q7Z2K8 1008 aa12.96□□□□□ -0.34
CBWD3-208ENST00000612050 ZNF276Q8N554 614 aa12.96□□□□□ -0.34
CBWD3-208ENST00000612050 HINFPQ9BQA5 517 aa12.96□□□□□ -0.34
CBWD3-208ENST00000612050 TUBGCP2Q9BSJ2 902 aa12.96□□□□□ -0.34
CBWD3-208ENST00000612050 TRIM62Q9BVG3 475 aa12.96□□□□□ -0.34
CBWD3-208ENST00000612050 CNGB3Q9NQW8 809 aa12.96□□□□□ -0.34
CBWD3-208ENST00000612050 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.96□□□□□ -0.34
CBWD3-208ENST00000612050 APEX2Q9UBZ4 518 aa12.96□□□□□ -0.34
CBWD3-208ENST00000612050 RASAL2Q9UJF2 1139 aa12.96□□□□□ -0.34
CBWD3-208ENST00000612050 CEP83Q9Y592 693 aa12.96□□□□□ -0.34
CBWD3-208ENST00000612050 USP3Q9Y6I4 520 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms