RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 NDRG2Q9UN36 371 aaKnown RBP27.4■■□□□ 1.98
VEGFA-226ENST00000611736 SCAMP3O14828 347 aaKnown RBP27.39■■□□□ 1.98
VEGFA-226ENST00000611736 TPM2P07951 284 aa27.39■■□□□ 1.98
VEGFA-226ENST00000611736 SETSIPP0DME0 302 aa27.39■■□□□ 1.98
VEGFA-226ENST00000611736 GLULP15104 373 aa27.39■■□□□ 1.98
VEGFA-226ENST00000611736 TARSP26639 723 aaKnown RBP27.39■■□□□ 1.98
VEGFA-226ENST00000611736 IFNAR2P48551 515 aa27.39■■□□□ 1.98
VEGFA-226ENST00000611736 TKTL1P51854 596 aa27.39■■□□□ 1.98
VEGFA-226ENST00000611736 PDGFRLQ15198 375 aa27.39■■□□□ 1.98
VEGFA-226ENST00000611736 STILQ15468 1287 aa27.39■■□□□ 1.98
VEGFA-226ENST00000611736 PKDCCQ504Y2 493 aa27.39■■□□□ 1.98
VEGFA-226ENST00000611736 RAB41Q5JT25 222 aa27.39■■□□□ 1.98
VEGFA-226ENST00000611736 CCDC105Q8IYK2 499 aa27.39■■□□□ 1.98
VEGFA-226ENST00000611736 OSCP1Q8WVF1 389 aa27.39■■□□□ 1.98
VEGFA-226ENST00000611736 FAM3CQ92520 227 aa27.39■■□□□ 1.98
VEGFA-226ENST00000611736 SECISBP2LQ93073 1101 aaKnown RBP27.39■■□□□ 1.98
VEGFA-226ENST00000611736 LSM14BQ9BX40 385 aaKnown RBP27.39■■□□□ 1.98
VEGFA-226ENST00000611736 NAT10Q9H0A0 1025 aaKnown RBP27.39■■□□□ 1.98
VEGFA-226ENST00000611736 C8orf33Q9H7E9 229 aaPredicted RBP27.39■■□□□ 1.98
VEGFA-226ENST00000611736 LRRC4Q9HBW1 653 aa27.39■■□□□ 1.98
VEGFA-226ENST00000611736 DNAJC12Q9UKB3 198 aa27.39■■□□□ 1.98
VEGFA-226ENST00000611736 MRPS17Q9Y2R5 130 aaKnown RBP27.39■■□□□ 1.98
VEGFA-226ENST00000611736 BECN2A8MW95 431 aa27.38■■□□□ 1.97
VEGFA-226ENST00000611736 TBX18O95935 607 aa27.38■■□□□ 1.97
VEGFA-226ENST00000611736 PTMSP20962 102 aa27.38■■□□□ 1.97
VEGFA-226ENST00000611736 PLA2G4AP47712 749 aa27.38■■□□□ 1.97
VEGFA-226ENST00000611736 ADIGQ0VDE8 80 aa27.38■■□□□ 1.97
VEGFA-226ENST00000611736 KCNMA1Q12791 1236 aa27.38■■□□□ 1.97
VEGFA-226ENST00000611736 RUNX3Q13761 415 aa27.38■■□□□ 1.97
VEGFA-226ENST00000611736 NCAPHQ15003 741 aa27.38■■□□□ 1.97
VEGFA-226ENST00000611736 SCD5Q86SK9 330 aa27.38■■□□□ 1.97
VEGFA-226ENST00000611736 SHC3Q92529 594 aa27.38■■□□□ 1.97
VEGFA-226ENST00000611736 PRRX2Q99811 253 aa27.38■■□□□ 1.97
VEGFA-226ENST00000611736 ULBP1Q9BZM6 244 aa27.38■■□□□ 1.97
VEGFA-226ENST00000611736 ACP6Q9NPH0 428 aa27.38■■□□□ 1.97
VEGFA-226ENST00000611736 NUDT5Q9UKK9 219 aa27.38■■□□□ 1.97
VEGFA-226ENST00000611736 OTOL1A6NHN0 477 aaPredicted RBP27.37■■□□□ 1.97
VEGFA-226ENST00000611736 SPECC1L-ADORA2AF8WAN1 911 aa27.37■■□□□ 1.97
VEGFA-226ENST00000611736 LETM1O95202 739 aaPredicted RBP27.37■■□□□ 1.97
VEGFA-226ENST00000611736 RARGP13631 454 aa27.37■■□□□ 1.97
VEGFA-226ENST00000611736 CTHP32929 405 aa27.37■■□□□ 1.97
VEGFA-226ENST00000611736 RGS7P49802 495 aa27.37■■□□□ 1.97
VEGFA-226ENST00000611736 DDX42Q86XP3 938 aaKnown RBP eCLIP27.37■■□□□ 1.974e-7■■■□□ 19
VEGFA-226ENST00000611736 ANKRD20A12PQ8NF67 263 aa27.37■■□□□ 1.97
VEGFA-226ENST00000611736 PRSS33Q8NF86 280 aa27.37■■□□□ 1.97
VEGFA-226ENST00000611736 NDRG1Q92597 394 aaKnown RBP27.37■■□□□ 1.97
VEGFA-226ENST00000611736 ZFRQ96KR1 1074 aaKnown RBP27.37■■□□□ 1.97
VEGFA-226ENST00000611736 CYLDQ9NQC7 956 aa27.37■■□□□ 1.97
VEGFA-226ENST00000611736 THAP12O43422 761 aa27.36■■□□□ 1.97
VEGFA-226ENST00000611736 GNA15P30679 374 aa27.36■■□□□ 1.97
VEGFA-226ENST00000611736 MLLT6P55198 1093 aaPredicted RBP27.36■■□□□ 1.97
VEGFA-226ENST00000611736 EML3Q32P44 896 aa27.36■■□□□ 1.97
VEGFA-226ENST00000611736 DPY19L2P1Q6NXN4 242 aa27.36■■□□□ 1.97
VEGFA-226ENST00000611736 TXNDC11Q6PKC3 985 aa27.36■■□□□ 1.97
VEGFA-226ENST00000611736 RALGPS2Q86X27 583 aaPredicted RBP27.36■■□□□ 1.97
VEGFA-226ENST00000611736 SIX6OS1Q8N1H7 587 aa27.36■■□□□ 1.97
VEGFA-226ENST00000611736 DTWD2Q8NBA8 298 aa27.36■■□□□ 1.97
VEGFA-226ENST00000611736 MSANTD3Q96H12 275 aa27.36■■□□□ 1.97
VEGFA-226ENST00000611736 NELL2Q99435 816 aa27.36■■□□□ 1.97
VEGFA-226ENST00000611736 LINC00597Q9H2U6 94 aa27.36■■□□□ 1.97
VEGFA-226ENST00000611736 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.36■■□□□ 1.97
VEGFA-226ENST00000611736 SYCE3A1L190 88 aa27.35■■□□□ 1.97
VEGFA-226ENST00000611736 PIK3R2O00459 728 aa27.35■■□□□ 1.97
VEGFA-226ENST00000611736 MDM4O15151 490 aa27.35■■□□□ 1.97
VEGFA-226ENST00000611736 GALR2O43603 387 aaPredicted RBP27.35■■□□□ 1.97
VEGFA-226ENST00000611736 ZBED1O96006 694 aa27.35■■□□□ 1.97
VEGFA-226ENST00000611736 IRF1P10914 325 aa27.35■■□□□ 1.97
VEGFA-226ENST00000611736 RALAP11233 206 aa27.35■■□□□ 1.97
VEGFA-226ENST00000611736 LCP1P13796 627 aa27.35■■□□□ 1.97
VEGFA-226ENST00000611736 CDK11BP21127 795 aaKnown RBP27.35■■□□□ 1.97
VEGFA-226ENST00000611736 ATP5C1P36542 298 aaKnown RBP27.35■■□□□ 1.97
VEGFA-226ENST00000611736 PSEN1P49768 467 aa27.35■■□□□ 1.97
VEGFA-226ENST00000611736 COPB1P53618 953 aaKnown RBP27.35■■□□□ 1.97
VEGFA-226ENST00000611736 RAPGEF1Q13905 1077 aa27.35■■□□□ 1.97
VEGFA-226ENST00000611736 C10orf120Q5SQS8 335 aa27.35■■□□□ 1.97
VEGFA-226ENST00000611736 KLHDC7AQ5VTJ3 777 aa27.35■■□□□ 1.97
VEGFA-226ENST00000611736 PMF1Q6P1K2 205 aa27.35■■□□□ 1.97
VEGFA-226ENST00000611736 CPA6Q8N4T0 437 aa27.35■■□□□ 1.97
VEGFA-226ENST00000611736 SLC35F5Q8WV83 523 aa27.35■■□□□ 1.97
VEGFA-226ENST00000611736 KCTD13Q8WZ19 329 aa27.35■■□□□ 1.97
VEGFA-226ENST00000611736 ATP2A3Q93084 1043 aa27.35■■□□□ 1.97
VEGFA-226ENST00000611736 OSBPL6Q9BZF3 934 aa27.35■■□□□ 1.97
VEGFA-226ENST00000611736 HSD3B7Q9H2F3 369 aa27.35■■□□□ 1.97
VEGFA-226ENST00000611736 ECT2Q9H8V3 914 aa27.35■■□□□ 1.97
VEGFA-226ENST00000611736 LIMA1Q9UHB6 759 aaKnown RBP27.35■■□□□ 1.97
VEGFA-226ENST00000611736 FHOD1Q9Y613 1164 aa27.35■■□□□ 1.97
VEGFA-226ENST00000611736 MED7O43513 233 aa27.34■■□□□ 1.97
VEGFA-226ENST00000611736 PNMA6AP0CW24 399 aaPredicted RBP27.34■■□□□ 1.97
VEGFA-226ENST00000611736 ZNF18P17022 549 aa27.34■■□□□ 1.97
VEGFA-226ENST00000611736 NUBP1P53384 320 aa27.34■■□□□ 1.97
VEGFA-226ENST00000611736 YWHAGP61981 247 aaKnown RBP eCLIP27.34■■□□□ 1.97
VEGFA-226ENST00000611736 FKBP15Q5T1M5 1219 aa27.34■■□□□ 1.97
VEGFA-226ENST00000611736 DENND1BQ6P3S1 775 aa27.34■■□□□ 1.97
VEGFA-226ENST00000611736 ARHGAP18Q8N392 663 aa27.34■■□□□ 1.97
VEGFA-226ENST00000611736 ZNF606Q8WXB4 792 aa27.34■■□□□ 1.97
VEGFA-226ENST00000611736 DLGAP2Q9P1A6 1054 aa27.34■■□□□ 1.97
VEGFA-226ENST00000611736 SH3BP1Q9Y3L3 701 aa27.34■■□□□ 1.97
VEGFA-226ENST00000611736 CACNA1IQ9P0X4 2223 aa27.34■■□□□ 1.97
VEGFA-226ENST00000611736 FOXN3O00409 490 aaPredicted RBP27.33■■□□□ 1.97
VEGFA-226ENST00000611736 PM20D1Q6GTS8 502 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms