RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 PDK1Q15118 436 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 SLC45A4Q5BKX6 768 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 EFHC1Q5JVL4 640 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 TEX9Q8N6V9 391 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 GLIS1Q8NBF1 620 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 C7orf43Q8WVR3 580 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 NAF1Q96HR8 494 aaKnown RBP9.01□□□□□ -0.97
LIG4-204ENST00000611712 PPP1R36Q96LQ0 422 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 TSC22D3Q99576 134 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 NIFKQ9BYG3 293 aaKnown RBP9.01□□□□□ -0.97
LIG4-204ENST00000611712 PIH1D1Q9NWS0 290 aaKnown RBP9.01□□□□□ -0.97
LIG4-204ENST00000611712 GEMIN8Q9NWZ8 242 aaKnown RBP9.01□□□□□ -0.97
LIG4-204ENST00000611712 TNFSF13BQ9Y275 285 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 SHANK3Q9BYB0 1731 aa9□□□□□ -0.97
LIG4-204ENST00000611712 A8MUI8 341 aa9□□□□□ -0.97
LIG4-204ENST00000611712 EEF2KO00418 725 aaKnown RBP9□□□□□ -0.97
LIG4-204ENST00000611712 FCHO1O14526 889 aa9□□□□□ -0.97
LIG4-204ENST00000611712 AVILO75366 819 aa9□□□□□ -0.97
LIG4-204ENST00000611712 POLBP06746 335 aa9□□□□□ -0.97
LIG4-204ENST00000611712 GSTA2P09210 222 aa9□□□□□ -0.97
LIG4-204ENST00000611712 FOXN2P32314 431 aa9□□□□□ -0.97
LIG4-204ENST00000611712 CUL3Q13618 768 aa9□□□□□ -0.97
LIG4-204ENST00000611712 LRRC36Q1X8D7 754 aa9□□□□□ -0.97
LIG4-204ENST00000611712 CELF3Q5SZQ8 465 aaKnown RBP9□□□□□ -0.97
LIG4-204ENST00000611712 RNASEH2BQ5TBB1 312 aaKnown RBP9□□□□□ -0.97
LIG4-204ENST00000611712 ANKRD22Q5VYY1 191 aa9□□□□□ -0.97
LIG4-204ENST00000611712 TXNRD3NBQ6F5E7 133 aa9□□□□□ -0.97
LIG4-204ENST00000611712 CPT1BQ92523 772 aa9□□□□□ -0.97
LIG4-204ENST00000611712 ZNF669Q96BR6 464 aaPredicted RBP9□□□□□ -0.97
LIG4-204ENST00000611712 C12orf65Q9H3J6 166 aaKnown RBP9□□□□□ -0.97
LIG4-204ENST00000611712 RNF19AQ9NV58 838 aa9□□□□□ -0.97
LIG4-204ENST00000611712 ITGA11Q9UKX5 1188 aa9□□□□□ -0.97
LIG4-204ENST00000611712 RPS6KL1Q9Y6S9 549 aa9□□□□□ -0.97
LIG4-204ENST00000611712 MYH7BA7E2Y1 1941 aa9□□□□□ -0.97
LIG4-204ENST00000611712 SDR42E2A6NKP2 422 aa9□□□□□ -0.97
LIG4-204ENST00000611712 H3BRB1 525 aa9□□□□□ -0.97
LIG4-204ENST00000611712 CD4P01730 458 aa9□□□□□ -0.97
LIG4-204ENST00000611712 CD48P09326 243 aa9□□□□□ -0.97
LIG4-204ENST00000611712 CYP2C9P11712 490 aa9□□□□□ -0.97
LIG4-204ENST00000611712 ALADP13716 330 aa9□□□□□ -0.97
LIG4-204ENST00000611712 SP2Q02086 613 aa9□□□□□ -0.97
LIG4-204ENST00000611712 RPS6KA2Q15349 733 aa9□□□□□ -0.97
LIG4-204ENST00000611712 RABGAP1LQ5R372 815 aa9□□□□□ -0.97
LIG4-204ENST00000611712 ANKRD20A2Q5SQ80 823 aa9□□□□□ -0.97
LIG4-204ENST00000611712 UBAP2Q5T6F2 1119 aaKnown RBP9□□□□□ -0.97
LIG4-204ENST00000611712 ANKRD20A1Q5TYW2 823 aa9□□□□□ -0.97
LIG4-204ENST00000611712 DCLK2Q8N568 766 aa9□□□□□ -0.97
LIG4-204ENST00000611712 MCUQ8NE86 351 aa9□□□□□ -0.97
LIG4-204ENST00000611712 SERPINI1Q99574 410 aa9□□□□□ -0.97
LIG4-204ENST00000611712 CEP41Q9BYV8 373 aa9□□□□□ -0.97
LIG4-204ENST00000611712 TRIM4Q9C037 500 aa9□□□□□ -0.97
LIG4-204ENST00000611712 Q9H521 79 aa9□□□□□ -0.97
LIG4-204ENST00000611712 TUT1Q9H6E5 874 aaKnown RBP9□□□□□ -0.97
LIG4-204ENST00000611712 SPC25Q9HBM1 224 aa9□□□□□ -0.97
LIG4-204ENST00000611712 SLC17A7Q9P2U7 560 aa9□□□□□ -0.97
LIG4-204ENST00000611712 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9□□□□□ -0.97
LIG4-204ENST00000611712 M0QYT0 321 aa9□□□□□ -0.97
LIG4-204ENST00000611712 MGRN1O60291 552 aa9□□□□□ -0.97
LIG4-204ENST00000611712 ERBB2P04626 1255 aa9□□□□□ -0.97
LIG4-204ENST00000611712 CYP2C8P10632 490 aa9□□□□□ -0.97
LIG4-204ENST00000611712 ACO1P21399 889 aaKnown RBP9□□□□□ -0.97
LIG4-204ENST00000611712 TGM2P21980 687 aa9□□□□□ -0.97
LIG4-204ENST00000611712 CDC25CP30307 473 aa9□□□□□ -0.97
LIG4-204ENST00000611712 VHLP40337 213 aa9□□□□□ -0.97
LIG4-204ENST00000611712 WDR4P57081 412 aaKnown RBP9□□□□□ -0.97
LIG4-204ENST00000611712 ENPEPQ07075 957 aa9□□□□□ -0.97
LIG4-204ENST00000611712 R3HDM1Q15032 1099 aaKnown RBP9□□□□□ -0.97
LIG4-204ENST00000611712 TREML2Q5T2D2 321 aa9□□□□□ -0.97
LIG4-204ENST00000611712 ITPRIPL1Q6GPH6 555 aa9□□□□□ -0.97
LIG4-204ENST00000611712 NOTUMQ6P988 496 aa9□□□□□ -0.97
LIG4-204ENST00000611712 RSPH3Q86UC2 560 aa9□□□□□ -0.97
LIG4-204ENST00000611712 GPRC5AQ8NFJ5 357 aa9□□□□□ -0.97
LIG4-204ENST00000611712 GSDMBQ8TAX9 411 aa9□□□□□ -0.97
LIG4-204ENST00000611712 SLC7A14Q8TBB6 771 aa9□□□□□ -0.97
LIG4-204ENST00000611712 RAB3IL1Q8TBN0 382 aa9□□□□□ -0.97
LIG4-204ENST00000611712 INPP5DQ92835 1189 aa9□□□□□ -0.97
LIG4-204ENST00000611712 RNF157Q96PX1 679 aa9□□□□□ -0.97
LIG4-204ENST00000611712 TBCBQ99426 244 aa9□□□□□ -0.97
LIG4-204ENST00000611712 TXLNGYQ9BZA5 131 aa9□□□□□ -0.97
LIG4-204ENST00000611712 PDGFDQ9GZP0 370 aaPredicted RBP9□□□□□ -0.97
LIG4-204ENST00000611712 CCDC134Q9H6E4 229 aa9□□□□□ -0.97
LIG4-204ENST00000611712 SNTG2Q9NY99 539 aa9□□□□□ -0.97
LIG4-204ENST00000611712 LAMB1P07942 1786 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 TCRBV9S1A1TA0A576 114 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 IRF6O14896 467 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 GIPC1O14908 333 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 KIF1CO43896 1103 aaKnown RBP8.99□□□□□ -0.97
LIG4-204ENST00000611712 ACCSLQ4AC99 568 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 FNBP1LQ5T0N5 605 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 KCNT2Q6UVM3 1135 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 FAM183BPQ6ZVS7 135 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 C12orf29Q8N999 325 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 TRPM4Q8TD43 1214 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 ZBTB10Q96DT7 871 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 BTBD10Q9BSF8 475 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 MTFR1LQ9H019 292 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 MROH8Q9H579 483 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 UBQLN1Q9UMX0 589 aaKnown RBP8.99□□□□□ -0.97
LIG4-204ENST00000611712 PPP2R3BQ9Y5P8 575 aa8.99□□□□□ -0.97
LIG4-204ENST00000611712 PTPRJQ12913 1337 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms