RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 AKR1A1P14550 325 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 RFX1P22670 979 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 SLC34A1Q06495 639 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 CACNB2Q08289 660 aaPredicted RBP16.66■□□□□ 0.26
RTN1-209ENST00000611068 TNFAIP8L3Q5GJ75 292 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 CFAP157Q5JU67 520 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 CPNE8Q86YQ8 564 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 NR1H4Q96RI1 486 aaPredicted RBP16.66■□□□□ 0.26
RTN1-209ENST00000611068 ADAMTS10Q9H324 1103 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 NENFQ9UMX5 172 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 HEY1Q9Y5J3 304 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 AKAP5P24588 427 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 PURAQ00577 322 aaKnown RBP16.66■□□□□ 0.26
RTN1-209ENST00000611068 AP1B1Q10567 949 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 GSTA3Q16772 222 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 SLC10A6Q3KNW5 377 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 WDR49Q8IV35 697 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 PDCD7Q8N8D1 485 aaKnown RBP16.66■□□□□ 0.26
RTN1-209ENST00000611068 KCNK9Q9NPC2 374 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.66■□□□□ 0.26
RTN1-209ENST00000611068 SNTG2Q9NY99 539 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 KLK14Q9P0G3 267 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 R3HDM2Q9Y2K5 976 aaKnown RBP16.66■□□□□ 0.26
RTN1-209ENST00000611068 SIP14410 1827 aa16.65■□□□□ 0.26
RTN1-209ENST00000611068 COL1A2P08123 1366 aa16.65■□□□□ 0.26
RTN1-209ENST00000611068 RASGRF2O14827 1237 aa16.65■□□□□ 0.26
RTN1-209ENST00000611068 MAP3K7O43318 606 aa16.65■□□□□ 0.26
RTN1-209ENST00000611068 ITGB3P05106 788 aa16.65■□□□□ 0.26
RTN1-209ENST00000611068 POU5F1Q01860 360 aaKnown RBP16.65■□□□□ 0.26
RTN1-209ENST00000611068 NANOGNBQ7Z5D8 188 aa16.65■□□□□ 0.26
RTN1-209ENST00000611068 SATL1Q86VE3 508 aa16.65■□□□□ 0.26
RTN1-209ENST00000611068 TPCN2Q8NHX9 752 aa16.65■□□□□ 0.26
RTN1-209ENST00000611068 FBXO25Q8TCJ0 367 aa16.65■□□□□ 0.26
RTN1-209ENST00000611068 IMPG2Q9BZV3 1241 aa16.65■□□□□ 0.26
RTN1-209ENST00000611068 RNASEH1O60930 286 aaKnown RBP16.65■□□□□ 0.26
RTN1-209ENST00000611068 TOMM70O94826 608 aa16.65■□□□□ 0.26
RTN1-209ENST00000611068 ASMTLO95671 621 aa16.65■□□□□ 0.26
RTN1-209ENST00000611068 HOXA11P31270 313 aaPredicted RBP16.65■□□□□ 0.26
RTN1-209ENST00000611068 GCNT1Q02742 428 aa16.65■□□□□ 0.26
RTN1-209ENST00000611068 LLGL1Q15334 1064 aa16.65■□□□□ 0.26
RTN1-209ENST00000611068 SPDYCQ5MJ68 293 aa16.65■□□□□ 0.26
RTN1-209ENST00000611068 MFSD14CQ5VZR4 134 aa16.65■□□□□ 0.26
RTN1-209ENST00000611068 KLC3Q6P597 504 aa16.65■□□□□ 0.26
RTN1-209ENST00000611068 DPH6Q7L8W6 267 aa16.65■□□□□ 0.26
RTN1-209ENST00000611068 CD99L2Q8TCZ2 262 aa16.65■□□□□ 0.26
RTN1-209ENST00000611068 DDX1Q92499 740 aaKnown RBP16.65■□□□□ 0.26
RTN1-209ENST00000611068 VTI1AQ96AJ9 217 aa16.65■□□□□ 0.26
RTN1-209ENST00000611068 NAP1L3Q99457 506 aaPredicted RBP16.65■□□□□ 0.26
RTN1-209ENST00000611068 SLITRK6Q9H5Y7 841 aa16.65■□□□□ 0.26
RTN1-209ENST00000611068 MGAMO43451 1857 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 RRN3P2A6NIE6 340 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 ATP5HO75947 161 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 PABPC4LP0CB38 370 aaKnown RBP16.64■□□□□ 0.25
RTN1-209ENST00000611068 EMP3P54852 163 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 MTFR1Q15390 333 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 TAOK1Q7L7X3 1001 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 ADAT2Q7Z6V5 191 aaKnown RBP16.64■□□□□ 0.25
RTN1-209ENST00000611068 C1orf127Q8N9H9 656 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 LRRC37BQ96QE4 947 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 DDX18Q9NVP1 670 aaKnown RBP16.64■□□□□ 0.25
RTN1-209ENST00000611068 SNX24Q9Y343 169 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 C17orf102A2RUQ5 167 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 HTR3EA5X5Y0 456 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 CCDC188H7C350 402 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 NDUFB5O43674 189 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 TNNC2P02585 160 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 CYBAP13498 195 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 PRKAR2AP13861 404 aaKnown RBP16.64■□□□□ 0.25
RTN1-209ENST00000611068 ACO1P21399 889 aaKnown RBP16.64■□□□□ 0.25
RTN1-209ENST00000611068 SP3Q02447 781 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 LONRF1Q17RB8 773 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 ZNF699Q32M78 642 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 ZDHHC24Q6UX98 284 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 PPFIBP2Q8ND30 876 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 ARHGEF2Q92974 986 aaKnown RBP16.64■□□□□ 0.25
RTN1-209ENST00000611068 WNT8BQ93098 351 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 ANKRD36BP1Q96IX9 119 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 PHF12Q96QT6 1004 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 GCOM2Q9BZD3 368 aaPredicted RBP16.64■□□□□ 0.25
RTN1-209ENST00000611068 NXF3Q9H4D5 531 aaKnown RBP16.64■□□□□ 0.25
RTN1-209ENST00000611068 SIX4Q9UIU6 781 aa16.64■□□□□ 0.25
RTN1-209ENST00000611068 PIN4Q9Y237 131 aaKnown RBP16.64■□□□□ 0.25
RTN1-209ENST00000611068 LAMA2P24043 3122 aaKnown RBP16.63■□□□□ 0.25
RTN1-209ENST00000611068 CES2O00748 559 aa16.63■□□□□ 0.25
RTN1-209ENST00000611068 MCCD1P59942 119 aaPredicted RBP16.63■□□□□ 0.25
RTN1-209ENST00000611068 CDR2Q01850 454 aa16.63■□□□□ 0.25
RTN1-209ENST00000611068 NOGQ13253 232 aa16.63■□□□□ 0.25
RTN1-209ENST00000611068 C10orf76Q5T2E6 689 aa16.63■□□□□ 0.25
RTN1-209ENST00000611068 DDX43Q9NXZ2 648 aaKnown RBP16.63■□□□□ 0.25
RTN1-209ENST00000611068 THAP12O43422 761 aa16.63■□□□□ 0.25
RTN1-209ENST00000611068 PSMG1O95456 288 aa16.63■□□□□ 0.25
RTN1-209ENST00000611068 CDK4P11802 303 aa16.63■□□□□ 0.25
RTN1-209ENST00000611068 FOXN2P32314 431 aa16.63■□□□□ 0.25
RTN1-209ENST00000611068 MTTPP55157 894 aa16.63■□□□□ 0.25
RTN1-209ENST00000611068 PEX26Q7Z412 305 aa16.63■□□□□ 0.25
RTN1-209ENST00000611068 PPP1R14BQ96C90 147 aa16.63■□□□□ 0.25
RTN1-209ENST00000611068 ACAP3Q96P50 834 aa16.63■□□□□ 0.25
RTN1-209ENST00000611068 OLFM3Q96PB7 478 aa16.63■□□□□ 0.25
RTN1-209ENST00000611068 NFKBIZQ9BYH8 718 aa16.63■□□□□ 0.25
RTN1-209ENST00000611068 RNF39Q9H2S5 420 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms