RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 OSER1Q9NX31 292 aa13.6□□□□□ -0.23
SNX20-205ENST00000610485 CHMP5Q9NZZ3 219 aa13.6□□□□□ -0.23
SNX20-205ENST00000610485 USP3Q9Y6I4 520 aa13.6□□□□□ -0.23
SNX20-205ENST00000610485 CACNA1IQ9P0X4 2223 aa13.6□□□□□ -0.23
SNX20-205ENST00000610485 BICDL2A1A5D9 508 aa13.59□□□□□ -0.23
SNX20-205ENST00000610485 BIN1O00499 593 aa13.59□□□□□ -0.23
SNX20-205ENST00000610485 HOXC13P31276 330 aa13.59□□□□□ -0.23
SNX20-205ENST00000610485 CNR2P34972 360 aa13.59□□□□□ -0.23
SNX20-205ENST00000610485 EIF2DP41214 584 aaKnown RBP13.59□□□□□ -0.23
SNX20-205ENST00000610485 CCDC40Q4G0X9 1142 aa13.59□□□□□ -0.23
SNX20-205ENST00000610485 KLHDC10Q6PID8 442 aa13.59□□□□□ -0.23
SNX20-205ENST00000610485 RHBDF2Q6PJF5 856 aa13.59□□□□□ -0.23
SNX20-205ENST00000610485 CCDC186Q7Z3E2 898 aa13.59□□□□□ -0.23
SNX20-205ENST00000610485 WDR5BQ86VZ2 330 aa13.59□□□□□ -0.23
SNX20-205ENST00000610485 DCLK2Q8N568 766 aa13.59□□□□□ -0.23
SNX20-205ENST00000610485 UBR7Q8N806 425 aa13.59□□□□□ -0.23
SNX20-205ENST00000610485 TRIML1Q8N9V2 468 aa13.59□□□□□ -0.23
SNX20-205ENST00000610485 UBXN6Q9BZV1 441 aa13.59□□□□□ -0.23
SNX20-205ENST00000610485 NACA2Q9H009 215 aa13.59□□□□□ -0.23
SNX20-205ENST00000610485 NMUR1Q9HB89 426 aa13.59□□□□□ -0.23
SNX20-205ENST00000610485 CTNND2Q9UQB3 1225 aa13.59□□□□□ -0.23
SNX20-205ENST00000610485 SH3BP1Q9Y3L3 701 aa13.59□□□□□ -0.23
SNX20-205ENST00000610485 CCDC163A0A0D9SF12 145 aa13.58□□□□□ -0.24
SNX20-205ENST00000610485 A0A1W2PQH9 124 aa13.58□□□□□ -0.24
SNX20-205ENST00000610485 P4HA2O15460 535 aa13.58□□□□□ -0.24
SNX20-205ENST00000610485 HRO43593 1189 aa13.58□□□□□ -0.24
SNX20-205ENST00000610485 GREM1O60565 184 aa13.58□□□□□ -0.24
SNX20-205ENST00000610485 ADH1CP00326 375 aa13.58□□□□□ -0.24
SNX20-205ENST00000610485 TBXAS1P24557 533 aaPredicted RBP13.58□□□□□ -0.24
SNX20-205ENST00000610485 ATP5C1P36542 298 aaKnown RBP13.58□□□□□ -0.24
SNX20-205ENST00000610485 MARSP56192 900 aaKnown RBP13.58□□□□□ -0.24
SNX20-205ENST00000610485 YWHAEP62258 255 aaKnown RBP13.58□□□□□ -0.24
SNX20-205ENST00000610485 PAK1Q13153 545 aa13.58□□□□□ -0.24
SNX20-205ENST00000610485 RAB41Q5JT25 222 aa13.58□□□□□ -0.24
SNX20-205ENST00000610485 SCD5Q86SK9 330 aa13.58□□□□□ -0.24
SNX20-205ENST00000610485 BBS7Q8IWZ6 715 aa13.58□□□□□ -0.24
SNX20-205ENST00000610485 ZNF276Q8N554 614 aa13.58□□□□□ -0.24
SNX20-205ENST00000610485 ANKRD52Q8NB46 1076 aa13.58□□□□□ -0.24
SNX20-205ENST00000610485 RPLP0P6Q8NHW5 317 aa13.58□□□□□ -0.24
SNX20-205ENST00000610485 CCDC26Q8TAB7 109 aa13.58□□□□□ -0.24
SNX20-205ENST00000610485 WBP2Q969T9 261 aa13.58□□□□□ -0.24
SNX20-205ENST00000610485 HINFPQ9BQA5 517 aa13.58□□□□□ -0.24
SNX20-205ENST00000610485 KLF16Q9BXK1 252 aaPredicted RBP13.58□□□□□ -0.24
SNX20-205ENST00000610485 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.58□□□□□ -0.24
SNX20-205ENST00000610485 NCDNQ9UBB6 729 aa13.58□□□□□ -0.24
SNX20-205ENST00000610485 SLC8A2Q9UPR5 921 aa13.58□□□□□ -0.24
SNX20-205ENST00000610485 ZNF638Q14966 1978 aaKnown RBP13.58□□□□□ -0.24
SNX20-205ENST00000610485 CFAP54Q96N23 3096 aa13.57□□□□□ -0.24
SNX20-205ENST00000610485 K7EQS6 105 aa13.57□□□□□ -0.24
SNX20-205ENST00000610485 HOXC11O43248 304 aaPredicted RBP13.57□□□□□ -0.24
SNX20-205ENST00000610485 GNA14O95837 355 aa13.57□□□□□ -0.24
SNX20-205ENST00000610485 TBX18O95935 607 aa13.57□□□□□ -0.24
SNX20-205ENST00000610485 ADH5P11766 374 aa13.57□□□□□ -0.24
SNX20-205ENST00000610485 RARGP13631 454 aa13.57□□□□□ -0.24
SNX20-205ENST00000610485 PSEN1P49768 467 aa13.57□□□□□ -0.24
SNX20-205ENST00000610485 STX17P56962 302 aa13.57□□□□□ -0.24
SNX20-205ENST00000610485 LRMPQ12912 555 aa13.57□□□□□ -0.24
SNX20-205ENST00000610485 SRSF5Q13243 272 aaKnown RBP13.57□□□□□ -0.24
SNX20-205ENST00000610485 HEATR6Q6AI08 1181 aaKnown RBP13.57□□□□□ -0.24
SNX20-205ENST00000610485 LAIR1Q6GTX8 287 aa13.57□□□□□ -0.24
SNX20-205ENST00000610485 HTR3DQ70Z44 454 aa13.57□□□□□ -0.24
SNX20-205ENST00000610485 SYT13Q7L8C5 426 aa13.57□□□□□ -0.24
SNX20-205ENST00000610485 PIGZQ86VD9 579 aa13.57□□□□□ -0.24
SNX20-205ENST00000610485 C12orf40Q86WS4 652 aa13.57□□□□□ -0.24
SNX20-205ENST00000610485 TTC30AQ86WT1 665 aa13.57□□□□□ -0.24
SNX20-205ENST00000610485 TRIM59Q8IWR1 403 aa13.57□□□□□ -0.24
SNX20-205ENST00000610485 CAMKK1Q8N5S9 505 aa13.57□□□□□ -0.24
SNX20-205ENST00000610485 LMO3Q8TAP4 145 aa13.57□□□□□ -0.24
SNX20-205ENST00000610485 USP33Q8TEY7 942 aa13.57□□□□□ -0.24
SNX20-205ENST00000610485 SECISBP2LQ93073 1101 aaKnown RBP13.57□□□□□ -0.24
SNX20-205ENST00000610485 ACDQ96AP0 544 aa13.57□□□□□ -0.24
SNX20-205ENST00000610485 POLR3BQ9NW08 1133 aaPredicted RBP13.57□□□□□ -0.24
SNX20-205ENST00000610485 CLIC5Q9NZA1 410 aa13.57□□□□□ -0.24
SNX20-205ENST00000610485 KIAA1468Q9P260 1216 aa13.57□□□□□ -0.24
SNX20-205ENST00000610485 IRF1P10914 325 aa13.56□□□□□ -0.24
SNX20-205ENST00000610485 CHRM1P11229 460 aaPredicted RBP13.56□□□□□ -0.24
SNX20-205ENST00000610485 SLC6A11P48066 632 aa13.56□□□□□ -0.24
SNX20-205ENST00000610485 SLC8A3P57103 927 aa13.56□□□□□ -0.24
SNX20-205ENST00000610485 GAD2Q05329 585 aa13.56□□□□□ -0.24
SNX20-205ENST00000610485 GOLGA8FQ08AF8 430 aa13.56□□□□□ -0.24
SNX20-205ENST00000610485 GOLGA8DPQ0D2H9 430 aa13.56□□□□□ -0.24
SNX20-205ENST00000610485 MESP2Q0VG99 397 aa13.56□□□□□ -0.24
SNX20-205ENST00000610485 SIM2Q14190 667 aaPredicted RBP13.56□□□□□ -0.24
SNX20-205ENST00000610485 GOLGA7BQ2TAP0 167 aa13.56□□□□□ -0.24
SNX20-205ENST00000610485 SGO2Q562F6 1265 aa13.56□□□□□ -0.24
SNX20-205ENST00000610485 LY6G5CQ5SRR4 150 aa13.56□□□□□ -0.24
SNX20-205ENST00000610485 TADA2BQ86TJ2 420 aa13.56□□□□□ -0.24
SNX20-205ENST00000610485 ETFBKMTQ8IXQ9 262 aa13.56□□□□□ -0.24
SNX20-205ENST00000610485 KIAA2013Q8IYS2 634 aa13.56□□□□□ -0.24
SNX20-205ENST00000610485 GPR161Q8N6U8 529 aaKnown RBP13.56□□□□□ -0.24
SNX20-205ENST00000610485 NT5C1BQ96P26 610 aa13.56□□□□□ -0.24
SNX20-205ENST00000610485 PNKPQ96T60 521 aa13.56□□□□□ -0.24
SNX20-205ENST00000610485 SPHK2Q9NRA0 654 aa13.56□□□□□ -0.24
SNX20-205ENST00000610485 DNMT3LQ9UJW3 386 aa13.56□□□□□ -0.24
SNX20-205ENST00000610485 NAGPAQ9UK23 515 aa13.56□□□□□ -0.24
SNX20-205ENST00000610485 GMEB2Q9UKD1 530 aa13.56□□□□□ -0.24
SNX20-205ENST00000610485 TSPAN16Q9UKR8 245 aa13.56□□□□□ -0.24
SNX20-205ENST00000610485 RAB23Q9ULC3 237 aa13.56□□□□□ -0.24
SNX20-205ENST00000610485 KIAA1257Q9ULG3 409 aa13.56□□□□□ -0.24
SNX20-205ENST00000610485 A0A0A0MRY4 1105 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms