RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 KLF8O95600 359 aaPredicted RBP18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 SLFN14P0C7P3 912 aa18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 TIE1P35590 1138 aa18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 SLC5A3P53794 718 aa18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 CACNA2D1P54289 1103 aa18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 FOXC1Q12948 553 aa18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 TMEM92Q6UXU6 159 aa18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 KIAA1549LQ6ZVL6 1849 aa18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 RABEPKQ7Z6M1 372 aa18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 SYT12Q8IV01 421 aa18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 ALLCQ8N6M5 410 aa18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 TMC2Q8TDI7 906 aa18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 KCNK16Q96T55 309 aa18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 NUSAP1Q9BXS6 441 aaKnown RBP18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 BACH2Q9BYV9 841 aa18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 BLZF1Q9H2G9 400 aa18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 CSNK1G1Q9HCP0 422 aa18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 TLR8Q9NR97 1041 aaKnown RBP18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 SPHK2Q9NRA0 654 aa18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 FOXD4L1Q9NU39 408 aa18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 TMEM30AQ9NV96 361 aa18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 WDR35Q9P2L0 1181 aa18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 PCDHA7Q9UN72 937 aa18.87■□□□□ 0.61
SHKBP1-227ENST00000602011 IGF2RP11717 2491 aa18.86■□□□□ 0.61
SHKBP1-227ENST00000602011 AP1G2O75843 785 aa18.86■□□□□ 0.61
SHKBP1-227ENST00000602011 ZSCAN22P10073 491 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-227ENST00000602011 BCKDHBP21953 392 aa18.86■□□□□ 0.61
SHKBP1-227ENST00000602011 DHPSP49366 369 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-227ENST00000602011 ENPEPQ07075 957 aa18.86■□□□□ 0.61
SHKBP1-227ENST00000602011 IFRD2Q12894 506 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-227ENST00000602011 SDE2Q6IQ49 451 aa18.86■□□□□ 0.61
SHKBP1-227ENST00000602011 SLC36A4Q6YBV0 504 aa18.86■□□□□ 0.61
SHKBP1-227ENST00000602011 PAQR9Q6ZVX9 377 aa18.86■□□□□ 0.61
SHKBP1-227ENST00000602011 HTR3DQ70Z44 454 aa18.86■□□□□ 0.61
SHKBP1-227ENST00000602011 ETFBKMTQ8IXQ9 262 aa18.86■□□□□ 0.61
SHKBP1-227ENST00000602011 CEP76Q8TAP6 659 aa18.86■□□□□ 0.61
SHKBP1-227ENST00000602011 ZFRQ96KR1 1074 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-227ENST00000602011 XPO6Q96QU8 1125 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-227ENST00000602011 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.86■□□□□ 0.61
SHKBP1-227ENST00000602011 BCCIPQ9P287 314 aaKnown RBP eCLIP18.86■□□□□ 0.61
SHKBP1-227ENST00000602011 NUP205Q92621 2012 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 LRRIQ3A6PVS8 624 aaPredicted RBP18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 SGK1O00141 431 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 MAPK13O15264 365 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 CLSTN1O94985 981 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 PROS1P07225 676 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 AFMP43652 599 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 CDH8P55286 799 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 ZNF252P-AS1Q0IIN9 211 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 CUL4BQ13620 913 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 E2F5Q15329 346 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 ZACNQ401N2 412 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 KLHDC10Q6PID8 442 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 TADA2BQ86TJ2 420 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 TTC30AQ86WT1 665 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 SFTPA1Q8IWL2 248 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 FUKQ8N0W3 1084 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 PHTF2Q8N3S3 785 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 SCAMP5Q8TAC9 235 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 PIGKQ92643 395 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 SMYD3Q9H7B4 428 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 PNPLA8Q9NP80 782 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 EXOC1Q9NV70 894 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 RCOR1Q9UKL0 485 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 FRMD4BQ9Y2L6 1034 aa18.85■□□□□ 0.61
SHKBP1-227ENST00000602011 ZZEF1O43149 2961 aa18.84■□□□□ 0.61
SHKBP1-227ENST00000602011 SCAMP3O14828 347 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-227ENST00000602011 AP5Z1O43299 807 aa18.84■□□□□ 0.61
SHKBP1-227ENST00000602011 ZNF217O75362 1048 aa18.84■□□□□ 0.61
SHKBP1-227ENST00000602011 TULP3O75386 442 aa18.84■□□□□ 0.61
SHKBP1-227ENST00000602011 HSP90AA1P07900 732 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-227ENST00000602011 CHRM1P11229 460 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-227ENST00000602011 ATP5C1P36542 298 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-227ENST00000602011 PSEN1P49768 467 aa18.84■□□□□ 0.61
SHKBP1-227ENST00000602011 SH3PXD2AQ5TCZ1 1133 aa18.84■□□□□ 0.61
SHKBP1-227ENST00000602011 PGBD3Q8N328 593 aa18.84■□□□□ 0.61
SHKBP1-227ENST00000602011 ZNF276Q8N554 614 aa18.84■□□□□ 0.61
SHKBP1-227ENST00000602011 CCDC47Q96A33 483 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-227ENST00000602011 FAXDC2Q96IV6 333 aa18.84■□□□□ 0.61
SHKBP1-227ENST00000602011 IMPG2Q9BZV3 1241 aa18.84■□□□□ 0.61
SHKBP1-227ENST00000602011 SLC32A1Q9H598 525 aa18.84■□□□□ 0.61
SHKBP1-227ENST00000602011 CYP3A43Q9HB55 503 aa18.84■□□□□ 0.61
SHKBP1-227ENST00000602011 CYLDQ9NQC7 956 aa18.84■□□□□ 0.61
SHKBP1-227ENST00000602011 LSM7Q9UK45 103 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-227ENST00000602011 THADAQ6YHU6 1953 aa18.84■□□□□ 0.61
SHKBP1-227ENST00000602011 PTPRDP23468 1912 aa18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 CDX4O14627 284 aaPredicted RBP18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 CALUO43852 315 aaPredicted RBP18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 TLR5O60602 858 aa18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 F13A1P00488 732 aa18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 ASS1P00966 412 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 HNRNPLP14866 589 aaKnown RBP eCLIP18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 NTSR1P30989 418 aa18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 CASP4P49662 377 aa18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 IRX4P78413 519 aa18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 STK4Q13043 487 aa18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 ANO4Q32M45 955 aa18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 MAP7D1Q3KQU3 841 aa18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 SLC23A3Q6PIS1 610 aa18.83■□□□□ 0.6
SHKBP1-227ENST00000602011 UNQ6494/PRO21346Q6UXR6 183 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms