RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 ATP2A3Q93084 1043 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 ZFYVE19Q96K21 471 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 TWNKQ96RR1 684 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 NAA15Q9BXJ9 866 aaKnown RBP13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 ZNF518BQ9C0D4 1074 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 SMG9Q9H0W8 520 aaKnown RBP13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 DPEP3Q9H4B8 488 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 LMAN1LQ9HAT1 526 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 UBE2TQ9NPD8 197 aaPredicted RBP13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 NLRC4Q9NPP4 1024 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 PRMT8Q9NR22 394 aaPredicted RBP13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 GTSE1Q9NYZ3 720 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 DNAJC12Q9UKB3 198 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 ARHGAP26Q9UNA1 814 aa13.55□□□□□ -0.24
SH2D3A-208ENST00000599563 CALCAP01258 141 aa13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 LMNAP02545 664 aaKnown RBP13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 CHRNB1P11230 501 aa13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 UCHL3P15374 230 aa13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 CD58P19256 250 aa13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 IFNAR2P48551 515 aa13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 NDST1P52848 882 aa13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 POLR2FP61218 127 aaKnown RBP13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 CSTF1Q05048 431 aaKnown RBP13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 USP4Q13107 963 aa13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 NR1H3Q13133 447 aa13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 FZD5Q13467 585 aa13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 TMC6Q7Z403 805 aa13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 ACOT1Q86TX2 421 aa13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 FAM35AQ86V20 835 aa13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 DDX42Q86XP3 938 aaKnown RBP eCLIP13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 SPEM1Q8N4L4 309 aa13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 NEK11Q8NG66 645 aa13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 ATRIPQ8WXE1 791 aa13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 MRFAP1L1Q96HT8 127 aa13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 NT5C1AQ9BXI3 368 aa13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 PLCB1Q9NQ66 1216 aa13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 ZSCAN32Q9NX65 697 aa13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 CCL26Q9Y258 94 aa13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 ITIH6Q6UXX5 1313 aa13.54□□□□□ -0.24
SH2D3A-208ENST00000599563 PTPRZ1P23471 2315 aaPredicted RBP13.53□□□□□ -0.24
SH2D3A-208ENST00000599563 ZNF292O60281 2723 aa13.53□□□□□ -0.24
SH2D3A-208ENST00000599563 ZNF840PA6NDX5 716 aa13.53□□□□□ -0.24
SH2D3A-208ENST00000599563 SLC9A3R1O14745 358 aaPredicted RBP13.53□□□□□ -0.24
SH2D3A-208ENST00000599563 AP1G2O75843 785 aa13.53□□□□□ -0.24
SH2D3A-208ENST00000599563 GYPCP04921 128 aa13.53□□□□□ -0.24
SH2D3A-208ENST00000599563 ACO1P21399 889 aaKnown RBP13.53□□□□□ -0.24
SH2D3A-208ENST00000599563 SLC7A9P82251 487 aa13.53□□□□□ -0.24
SH2D3A-208ENST00000599563 TNK2Q07912 1038 aa13.53□□□□□ -0.24
SH2D3A-208ENST00000599563 TAF10Q12962 218 aa13.53□□□□□ -0.24
SH2D3A-208ENST00000599563 MTAPQ13126 283 aa13.53□□□□□ -0.24
SH2D3A-208ENST00000599563 ZNF77Q15935 545 aa13.53□□□□□ -0.24
SH2D3A-208ENST00000599563 E4F1Q66K89 784 aaPredicted RBP13.53□□□□□ -0.24
SH2D3A-208ENST00000599563 MAML2Q8IZL2 1156 aaPredicted RBP13.53□□□□□ -0.24
SH2D3A-208ENST00000599563 FUKQ8N0W3 1084 aa13.53□□□□□ -0.24
SH2D3A-208ENST00000599563 ARL14EPQ8N8R7 260 aaPredicted RBP13.53□□□□□ -0.24
SH2D3A-208ENST00000599563 CCDC26Q8TAB7 109 aa13.53□□□□□ -0.24
SH2D3A-208ENST00000599563 WHAMMQ8TF30 809 aa13.53□□□□□ -0.24
SH2D3A-208ENST00000599563 OSCP1Q8WVF1 389 aa13.53□□□□□ -0.24
SH2D3A-208ENST00000599563 CYP2S1Q96SQ9 504 aa13.53□□□□□ -0.24
SH2D3A-208ENST00000599563 FBXO44Q9H4M3 255 aa13.53□□□□□ -0.24
SH2D3A-208ENST00000599563 DUS2Q9NX74 493 aaKnown RBP13.53□□□□□ -0.24
SH2D3A-208ENST00000599563 C2orf78A6NCI8 922 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 CLDN5O00501 218 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 NFATC1O95644 943 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 OLFM2O95897 454 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 FAM200BP0CF97 657 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 CXCL12P48061 93 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 SOX9P48436 509 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 TUBP50607 506 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 JAM2P57087 298 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 USP46P62068 366 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 GCNT1Q02742 428 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 GRSF1Q12849 480 aaKnown RBP eCLIP13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 RAPGEF1Q13905 1077 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 ASCL5Q7RTU5 278 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 ZBTB44Q8NCP5 570 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 SLC2A14Q8TDB8 520 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 SH3RF2Q8TEC5 729 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 CPLX3Q8WVH0 158 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 BAP1Q92560 729 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 NELL1Q92832 810 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 FBXO32Q969P5 355 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 SLC22A12Q96S37 553 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 HNRNPABQ99729 332 aaKnown RBP13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 EBF3Q9H4W6 596 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 CSNK1G1Q9HCP0 422 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 PNPLA8Q9NP80 782 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 HPS4Q9NQG7 708 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 KRT82Q9NSB4 513 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 CISHQ9NSE2 258 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 IL37Q9NZH6 218 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 R4GN57 208 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 GVINP1Q7Z2Y8 2422 aa13.52□□□□□ -0.25
SH2D3A-208ENST00000599563 WDR87Q6ZQQ6 2873 aa13.51□□□□□ -0.25
SH2D3A-208ENST00000599563 FAM92AA1XBS5 289 aa13.51□□□□□ -0.25
SH2D3A-208ENST00000599563 TRDMT1O14717 391 aaKnown RBP13.51□□□□□ -0.25
SH2D3A-208ENST00000599563 ATG13O75143 517 aa13.51□□□□□ -0.25
SH2D3A-208ENST00000599563 CILPO75339 1184 aa13.51□□□□□ -0.25
SH2D3A-208ENST00000599563 PAPSS2O95340 614 aaPredicted RBP13.51□□□□□ -0.25
SH2D3A-208ENST00000599563 ABL1P00519 1130 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms