RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 CD6P30203 668 aa16.5■□□□□ 0.23
LIG1-214ENST00000597146 EIF2S3P41091 472 aaKnown RBP16.5■□□□□ 0.23
LIG1-214ENST00000597146 PNPLA4P41247 253 aa16.5■□□□□ 0.23
LIG1-214ENST00000597146 CFHR1Q03591 330 aa16.5■□□□□ 0.23
LIG1-214ENST00000597146 MYO1EQ12965 1108 aa16.5■□□□□ 0.23
LIG1-214ENST00000597146 NUMA1Q14980 2115 aa16.5■□□□□ 0.23
LIG1-214ENST00000597146 ARSHQ5FYA8 562 aa16.5■□□□□ 0.23
LIG1-214ENST00000597146 BTBD8Q5XKL5 378 aa16.5■□□□□ 0.23
LIG1-214ENST00000597146 ADALQ6DHV7 355 aa16.5■□□□□ 0.23
LIG1-214ENST00000597146 DBX2Q6ZNG2 339 aa16.5■□□□□ 0.23
LIG1-214ENST00000597146 BRAPQ7Z569 592 aa16.5■□□□□ 0.23
LIG1-214ENST00000597146 ADGRF2Q8IZF7 708 aa16.5■□□□□ 0.23
LIG1-214ENST00000597146 LSM14AQ8ND56 463 aaKnown RBP16.5■□□□□ 0.23
LIG1-214ENST00000597146 RASSF8Q8NHQ8 419 aa16.5■□□□□ 0.23
LIG1-214ENST00000597146 DNASE2BQ8WZ79 361 aa16.5■□□□□ 0.23
LIG1-214ENST00000597146 TOE1Q96GM8 510 aaKnown RBP16.5■□□□□ 0.23
LIG1-214ENST00000597146 SPATA17Q96L03 361 aa16.5■□□□□ 0.23
LIG1-214ENST00000597146 REEP2Q9BRK0 252 aa16.5■□□□□ 0.23
LIG1-214ENST00000597146 GPR174Q9BXC1 333 aa16.5■□□□□ 0.23
LIG1-214ENST00000597146 AGAP1Q9UPQ3 857 aa16.5■□□□□ 0.23
LIG1-214ENST00000597146 VWA3AA6NCI4 1184 aa16.49■□□□□ 0.23
LIG1-214ENST00000597146 CAPN9O14815 690 aa16.49■□□□□ 0.23
LIG1-214ENST00000597146 HOXC11O43248 304 aaPredicted RBP16.49■□□□□ 0.23
LIG1-214ENST00000597146 PLA2G4BP0C869 781 aa16.49■□□□□ 0.23
LIG1-214ENST00000597146 GRIK1P39086 918 aa16.49■□□□□ 0.23
LIG1-214ENST00000597146 SEMG2Q02383 582 aa16.49■□□□□ 0.23
LIG1-214ENST00000597146 PTPRNQ16849 979 aa16.49■□□□□ 0.23
LIG1-214ENST00000597146 ANO4Q32M45 955 aa16.49■□□□□ 0.23
LIG1-214ENST00000597146 DCAF12L1Q5VU92 463 aa16.49■□□□□ 0.23
LIG1-214ENST00000597146 FAM171BQ6P995 826 aa16.49■□□□□ 0.23
LIG1-214ENST00000597146 CRELD2Q6UXH1 353 aaPredicted RBP16.49■□□□□ 0.23
LIG1-214ENST00000597146 TMEM86AQ8N2M4 240 aa16.49■□□□□ 0.23
LIG1-214ENST00000597146 C1orf127Q8N9H9 656 aa16.49■□□□□ 0.23
LIG1-214ENST00000597146 NXPE2Q96DL1 559 aa16.49■□□□□ 0.23
LIG1-214ENST00000597146 ZFRQ96KR1 1074 aaKnown RBP16.49■□□□□ 0.23
LIG1-214ENST00000597146 GABRG3Q99928 467 aa16.49■□□□□ 0.23
LIG1-214ENST00000597146 TTLL2Q9BWV7 592 aa16.49■□□□□ 0.23
LIG1-214ENST00000597146 CRTAC1Q9NQ79 661 aa16.49■□□□□ 0.23
LIG1-214ENST00000597146 TBC1D14Q9P2M4 693 aa16.49■□□□□ 0.23
LIG1-214ENST00000597146 AGO2Q9UKV8 859 aaKnown RBP16.49■□□□□ 0.23
LIG1-214ENST00000597146 PCDHGB2Q9Y5G2 931 aa16.49■□□□□ 0.23
LIG1-214ENST00000597146 SNX9Q9Y5X1 595 aa16.49■□□□□ 0.23
LIG1-214ENST00000597146 SLCO1B1Q9Y6L6 691 aa16.49■□□□□ 0.23
LIG1-214ENST00000597146 PIEZO2Q9H5I5 2752 aa16.49■□□□□ 0.23
LIG1-214ENST00000597146 A0A1B0GVT2 93 aa16.48■□□□□ 0.23
LIG1-214ENST00000597146 BCAT2O15382 392 aaPredicted RBP16.48■□□□□ 0.23
LIG1-214ENST00000597146 BMP15O95972 392 aa16.48■□□□□ 0.23
LIG1-214ENST00000597146 PLCG1P19174 1290 aa16.48■□□□□ 0.23
LIG1-214ENST00000597146 UBA7P41226 1012 aa16.48■□□□□ 0.23
LIG1-214ENST00000597146 TFAMQ00059 246 aaKnown RBP16.48■□□□□ 0.23
LIG1-214ENST00000597146 IFRD2Q12894 506 aaPredicted RBP16.48■□□□□ 0.23
LIG1-214ENST00000597146 TAF10Q12962 218 aa16.48■□□□□ 0.23
LIG1-214ENST00000597146 CUL4AQ13619 759 aa16.48■□□□□ 0.23
LIG1-214ENST00000597146 HYIQ5T013 277 aa16.48■□□□□ 0.23
LIG1-214ENST00000597146 LRRC69Q6ZNQ3 347 aa16.48■□□□□ 0.23
LIG1-214ENST00000597146 C4orf50Q6ZRC1 276 aa16.48■□□□□ 0.23
LIG1-214ENST00000597146 DDX42Q86XP3 938 aaKnown RBP eCLIP16.48■□□□□ 0.23
LIG1-214ENST00000597146 TMEM25Q86YD3 366 aa16.48■□□□□ 0.23
LIG1-214ENST00000597146 LURAP1LQ8IV03 231 aa16.48■□□□□ 0.23
LIG1-214ENST00000597146 BBS7Q8IWZ6 715 aa16.48■□□□□ 0.23
LIG1-214ENST00000597146 MYCT1Q8N699 235 aa16.48■□□□□ 0.23
LIG1-214ENST00000597146 WBP2Q969T9 261 aa16.48■□□□□ 0.23
LIG1-214ENST00000597146 SYT15Q9BQS2 421 aa16.48■□□□□ 0.23
LIG1-214ENST00000597146 TRIM9Q9C026 710 aa16.48■□□□□ 0.23
LIG1-214ENST00000597146 WSB2Q9NYS7 404 aaPredicted RBP16.48■□□□□ 0.23
LIG1-214ENST00000597146 KCND2Q9NZV8 630 aa16.48■□□□□ 0.23
LIG1-214ENST00000597146 GMIPQ9P107 970 aa16.48■□□□□ 0.23
LIG1-214ENST00000597146 MAGEC2Q9UBF1 373 aaPredicted RBP16.48■□□□□ 0.23
LIG1-214ENST00000597146 STARD13Q9Y3M8 1113 aa16.48■□□□□ 0.23
LIG1-214ENST00000597146 CKAP5Q14008 2032 aa16.47■□□□□ 0.23
LIG1-214ENST00000597146 E2F8A0AVK6 867 aa16.47■□□□□ 0.23
LIG1-214ENST00000597146 WASH3PC4AMC7 463 aa16.47■□□□□ 0.23
LIG1-214ENST00000597146 PRRT4C9JH25 899 aa16.47■□□□□ 0.23
LIG1-214ENST00000597146 K7ELQ4 463 aaPredicted RBP16.47■□□□□ 0.23
LIG1-214ENST00000597146 GABRDO14764 452 aa16.47■□□□□ 0.23
LIG1-214ENST00000597146 ARHGAP6O43182 974 aa16.47■□□□□ 0.23
LIG1-214ENST00000597146 TNFSF14O43557 240 aa16.47■□□□□ 0.23
LIG1-214ENST00000597146 ANXA13P27216 316 aa16.47■□□□□ 0.23
LIG1-214ENST00000597146 PCSK1P29120 753 aa16.47■□□□□ 0.23
LIG1-214ENST00000597146 CYP27A1Q02318 531 aa16.47■□□□□ 0.23
LIG1-214ENST00000597146 ARL6IP4Q66PJ3 421 aaKnown RBP16.47■□□□□ 0.23
LIG1-214ENST00000597146 GRAMD4Q6IC98 578 aa16.47■□□□□ 0.23
LIG1-214ENST00000597146 IL27RAQ6UWB1 636 aa16.47■□□□□ 0.23
LIG1-214ENST00000597146 HSCBQ8IWL3 235 aa16.47■□□□□ 0.23
LIG1-214ENST00000597146 CALML4Q96GE6 196 aa16.47■□□□□ 0.23
LIG1-214ENST00000597146 SPHK2Q9NRA0 654 aa16.47■□□□□ 0.23
LIG1-214ENST00000597146 DNAJC17Q9NVM6 304 aaKnown RBP16.47■□□□□ 0.23
LIG1-214ENST00000597146 EIF2B4Q9UI10 523 aaKnown RBP16.47■□□□□ 0.23
LIG1-214ENST00000597146 DNMT3LQ9UJW3 386 aa16.47■□□□□ 0.23
LIG1-214ENST00000597146 KCNJ18B7U540 433 aa16.46■□□□□ 0.23
LIG1-214ENST00000597146 E9PAM4 449 aa16.46■□□□□ 0.23
LIG1-214ENST00000597146 F8VP50 259 aa16.46■□□□□ 0.23
LIG1-214ENST00000597146 FAM13AO94988 1023 aa16.46■□□□□ 0.23
LIG1-214ENST00000597146 LMO2P25791 158 aa16.46■□□□□ 0.23
LIG1-214ENST00000597146 LHX1P48742 406 aa16.46■□□□□ 0.23
LIG1-214ENST00000597146 CACNA2D1P54289 1103 aa16.46■□□□□ 0.23
LIG1-214ENST00000597146 SOWAHAQ2M3V2 549 aa16.46■□□□□ 0.23
LIG1-214ENST00000597146 SDE2Q6IQ49 451 aa16.46■□□□□ 0.23
LIG1-214ENST00000597146 VSTM1Q6UX27 236 aa16.46■□□□□ 0.23
LIG1-214ENST00000597146 GPR155Q7Z3F1 870 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms