RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 WNT6Q9Y6F9 365 aa22.22■■□□□ 1.15
PNKP-209ENST00000596726 TULP2O00295 520 aa22.21■■□□□ 1.15
PNKP-209ENST00000596726 TLR5O60602 858 aa22.21■■□□□ 1.15
PNKP-209ENST00000596726 IFNAR2P48551 515 aa22.21■■□□□ 1.15
PNKP-209ENST00000596726 NHLH1Q02575 133 aa22.21■■□□□ 1.15
PNKP-209ENST00000596726 BST2Q10589 180 aaKnown RBP22.21■■□□□ 1.15
PNKP-209ENST00000596726 STILQ15468 1287 aa22.21■■□□□ 1.15
PNKP-209ENST00000596726 TCP11X2Q5H9J9 407 aa22.21■■□□□ 1.15
PNKP-209ENST00000596726 GJB7Q6PEY0 223 aa22.21■■□□□ 1.15
PNKP-209ENST00000596726 C11orf57Q6ZUT1 292 aaPredicted RBP22.21■■□□□ 1.15
PNKP-209ENST00000596726 SCD5Q86SK9 330 aa22.21■■□□□ 1.15
PNKP-209ENST00000596726 DDX42Q86XP3 938 aaKnown RBP eCLIP22.21■■□□□ 1.15
PNKP-209ENST00000596726 CHFRQ96EP1 664 aa22.21■■□□□ 1.15
PNKP-209ENST00000596726 LINC00597Q9H2U6 94 aa22.21■■□□□ 1.15
PNKP-209ENST00000596726 SIX2Q9NPC8 291 aa22.21■■□□□ 1.15
PNKP-209ENST00000596726 APEX2Q9UBZ4 518 aa22.21■■□□□ 1.15
PNKP-209ENST00000596726 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.21■■□□□ 1.153e-6■■■■□ 21.1
PNKP-209ENST00000596726 A0A1W2PQH9 124 aa22.2■■□□□ 1.14
PNKP-209ENST00000596726 CALCAP01258 141 aa22.2■■□□□ 1.14
PNKP-209ENST00000596726 SETSIPP0DME0 302 aa22.2■■□□□ 1.14
PNKP-209ENST00000596726 CHRNB1P11230 501 aa22.2■■□□□ 1.14
PNKP-209ENST00000596726 PRKCSHP14314 528 aaPredicted RBP22.2■■□□□ 1.14
PNKP-209ENST00000596726 EEF1GP26641 437 aaKnown RBP22.2■■□□□ 1.14
PNKP-209ENST00000596726 PLA2G5P39877 138 aa22.2■■□□□ 1.14
PNKP-209ENST00000596726 PLA2G4AP47712 749 aa22.2■■□□□ 1.14
PNKP-209ENST00000596726 PSEN1P49768 467 aa22.2■■□□□ 1.14
PNKP-209ENST00000596726 MFAP3P55082 362 aa22.2■■□□□ 1.14
PNKP-209ENST00000596726 APBA1Q02410 837 aa22.2■■□□□ 1.14
PNKP-209ENST00000596726 STX1AQ16623 288 aa22.2■■□□□ 1.14
PNKP-209ENST00000596726 CDKAL1Q5VV42 579 aa22.2■■□□□ 1.14
PNKP-209ENST00000596726 SMYD5Q6GMV2 418 aa22.2■■□□□ 1.14
PNKP-209ENST00000596726 DPY19L2P1Q6NXN4 242 aa22.2■■□□□ 1.14
PNKP-209ENST00000596726 TTC16Q8NEE8 873 aa22.2■■□□□ 1.14
PNKP-209ENST00000596726 UBA3Q8TBC4 463 aa22.2■■□□□ 1.14
PNKP-209ENST00000596726 ATP2A3Q93084 1043 aa22.2■■□□□ 1.14
PNKP-209ENST00000596726 IRF2BPLQ9H1B7 796 aa22.2■■□□□ 1.14
PNKP-209ENST00000596726 ECT2Q9H8V3 914 aa22.2■■□□□ 1.14
PNKP-209ENST00000596726 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.2■■□□□ 1.14
PNKP-209ENST00000596726 MYOFQ9NZM1 2061 aa22.19■■□□□ 1.14
PNKP-209ENST00000596726 H0Y858 1186 aa22.19■■□□□ 1.14
PNKP-209ENST00000596726 BRD2P25440 801 aaKnown RBP22.19■■□□□ 1.14
PNKP-209ENST00000596726 PM20D1Q6GTS8 502 aa22.19■■□□□ 1.14
PNKP-209ENST00000596726 KLHDC10Q6PID8 442 aa22.19■■□□□ 1.14
PNKP-209ENST00000596726 SLC35F5Q8WV83 523 aa22.19■■□□□ 1.14
PNKP-209ENST00000596726 KCTD13Q8WZ19 329 aa22.19■■□□□ 1.14
PNKP-209ENST00000596726 FAM122AQ96E09 287 aa22.19■■□□□ 1.14
PNKP-209ENST00000596726 LMAN1LQ9HAT1 526 aa22.19■■□□□ 1.14
PNKP-209ENST00000596726 CLIC5Q9NZA1 410 aa22.19■■□□□ 1.14
PNKP-209ENST00000596726 CFAP97Q9P2B7 532 aa22.19■■□□□ 1.14
PNKP-209ENST00000596726 E2F8A0AVK6 867 aa22.18■■□□□ 1.14
PNKP-209ENST00000596726 TBX18O95935 607 aa22.18■■□□□ 1.14
PNKP-209ENST00000596726 RARGP13631 454 aa22.18■■□□□ 1.14
PNKP-209ENST00000596726 GJA4P35212 333 aa22.18■■□□□ 1.14
PNKP-209ENST00000596726 TKTL1P51854 596 aa22.18■■□□□ 1.14
PNKP-209ENST00000596726 ANGPT1Q15389 498 aa22.18■■□□□ 1.14
PNKP-209ENST00000596726 BHLHA9Q7RTU4 235 aa22.18■■□□□ 1.14
PNKP-209ENST00000596726 C1orf210Q8IVY1 113 aa22.18■■□□□ 1.14
PNKP-209ENST00000596726 CPA6Q8N4T0 437 aa22.18■■□□□ 1.14
PNKP-209ENST00000596726 KLF16Q9BXK1 252 aaPredicted RBP22.18■■□□□ 1.14
PNKP-209ENST00000596726 NAGPAQ9UK23 515 aa22.18■■□□□ 1.14
PNKP-209ENST00000596726 BECN2A8MW95 431 aa22.17■■□□□ 1.14
PNKP-209ENST00000596726 SLC9A3R1O14745 358 aaPredicted RBP22.17■■□□□ 1.14
PNKP-209ENST00000596726 GABBR2O75899 941 aa22.17■■□□□ 1.14
PNKP-209ENST00000596726 KRT5P13647 590 aa22.17■■□□□ 1.14
PNKP-209ENST00000596726 ATP5C1P36542 298 aaKnown RBP22.17■■□□□ 1.14
PNKP-209ENST00000596726 KCNMA1Q12791 1236 aa22.17■■□□□ 1.14
PNKP-209ENST00000596726 PON2Q15165 354 aa22.17■■□□□ 1.14
PNKP-209ENST00000596726 ADGRG2Q8IZP9 1017 aa22.17■■□□□ 1.14
PNKP-209ENST00000596726 SCML4Q8N228 414 aa22.17■■□□□ 1.14
PNKP-209ENST00000596726 SHC3Q92529 594 aa22.17■■□□□ 1.14
PNKP-209ENST00000596726 ULBP1Q9BZM6 244 aa22.17■■□□□ 1.14
PNKP-209ENST00000596726 CHRDQ9H2X0 955 aa22.17■■□□□ 1.14
PNKP-209ENST00000596726 AJAP1Q9UKB5 411 aaPredicted RBP22.17■■□□□ 1.14
PNKP-209ENST00000596726 TRDMT1O14717 391 aaKnown RBP22.16■■□□□ 1.14
PNKP-209ENST00000596726 NFATC1O95644 943 aa22.16■■□□□ 1.14
PNKP-209ENST00000596726 ZBED1O96006 694 aa22.16■■□□□ 1.14
PNKP-209ENST00000596726 AMPD2Q01433 879 aa22.16■■□□□ 1.14
PNKP-209ENST00000596726 TYRO3Q06418 890 aa22.16■■□□□ 1.14
PNKP-209ENST00000596726 ARHGAP44Q17R89 818 aa22.16■■□□□ 1.14
PNKP-209ENST00000596726 PMF1Q6P1K2 205 aa22.16■■□□□ 1.14
PNKP-209ENST00000596726 MAML2Q8IZL2 1156 aaPredicted RBP22.16■■□□□ 1.14
PNKP-209ENST00000596726 ARHGAP18Q8N392 663 aa22.16■■□□□ 1.14
PNKP-209ENST00000596726 SECISBP2LQ93073 1101 aaKnown RBP22.16■■□□□ 1.14
PNKP-209ENST00000596726 WBP2Q969T9 261 aa22.16■■□□□ 1.14
PNKP-209ENST00000596726 NACA2Q9H009 215 aa22.16■■□□□ 1.14
PNKP-209ENST00000596726 LRRC4Q9HBW1 653 aa22.16■■□□□ 1.14
PNKP-209ENST00000596726 FANCLQ9NW38 375 aa22.16■■□□□ 1.14
PNKP-209ENST00000596726 TBC1D14Q9P2M4 693 aa22.16■■□□□ 1.14
PNKP-209ENST00000596726 M0QYV0 167 aa22.15■■□□□ 1.14
PNKP-209ENST00000596726 GREM1O60565 184 aa22.15■■□□□ 1.14
PNKP-209ENST00000596726 RALAP11233 206 aa22.15■■□□□ 1.14
PNKP-209ENST00000596726 MYL5Q02045 173 aa22.15■■□□□ 1.14
PNKP-209ENST00000596726 ADIGQ0VDE8 80 aa22.15■■□□□ 1.14
PNKP-209ENST00000596726 NR1H3Q13133 447 aa22.15■■□□□ 1.14
PNKP-209ENST00000596726 CCINQ13939 588 aa22.15■■□□□ 1.14
PNKP-209ENST00000596726 MEA1Q16626 185 aa22.15■■□□□ 1.14
PNKP-209ENST00000596726 GAB4Q2WGN9 574 aa22.15■■□□□ 1.14
PNKP-209ENST00000596726 TMEM196Q5HYL7 178 aa22.15■■□□□ 1.14
PNKP-209ENST00000596726 DGKKQ5KSL6 1271 aa22.15■■□□□ 1.14
PNKP-209ENST00000596726 MAMSTRQ6ZN01 415 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms