RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 DEC1Q9P2X7 70 aa11.2□□□□□ -0.62
CHMP2A-202ENST00000596708 PVALEFA0A1B0GWK0 134 aa11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 K7ELQ4 463 aaPredicted RBP11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 TNFRSF10BO14763 440 aa11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 ADAM23O75077 832 aa11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 PROS1P07225 676 aa11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 CEACAM1P13688 526 aa11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 CSRP1P21291 193 aaKnown RBP11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 AP3M2P53677 418 aa11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 SLC5A3P53794 718 aa11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 EHHADHQ08426 723 aa11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 LMAN2Q12907 356 aa11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 KNOP1Q1ED39 458 aaKnown RBP11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 PAQR9Q6ZVX9 377 aa11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 TRMT11Q7Z4G4 463 aaKnown RBP11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 ACOT1Q86TX2 421 aa11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 SYT12Q8IV01 421 aa11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 BBS7Q8IWZ6 715 aa11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 C12orf56Q8IXR9 622 aa11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 ZNF513Q8N8E2 541 aaPredicted RBP11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 DEFB124Q8NES8 71 aa11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 PLEKHO2Q8TD55 490 aa11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 ELMO3Q96BJ8 720 aa11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 SMARCD1Q96GM5 515 aa11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 SPHK2Q9NRA0 654 aa11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 COMMD8Q9NX08 183 aa11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 GMIPQ9P107 970 aa11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 EVLQ9UI08 416 aaPredicted RBP11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 MBD1Q9UIS9 605 aaPredicted RBP11.19□□□□□ -0.62
CHMP2A-202ENST00000596708 CACNA1EQ15878 2313 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 ATXN2Q99700 1313 aaKnown RBP11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 LRRIQ3A6PVS8 624 aaPredicted RBP11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 C1QTNF9BB2RNN3 333 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 ZBTB24O43167 697 aaPredicted RBP11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 TULP3O75386 442 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 C4BPAP04003 597 aaKnown RBP11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 C1QTNF9P0C862 333 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 P4HA1P13674 534 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 SPINK2P20155 84 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 DPP6P42658 865 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 WASP42768 502 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 PTGER3P43115 390 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 MAPK8P45983 427 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 ATXN3P54252 364 aaPredicted RBP11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 ORC1Q13415 861 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 CUL4BQ13620 913 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 NCOA4Q13772 614 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 BMT2Q1RMZ1 405 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 MAP7D1Q3KQU3 841 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 C10orf76Q5T2E6 689 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 SNX30Q5VWJ9 437 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 LYSMD4Q5XG99 296 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 SDE2Q6IQ49 451 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 UNQ6494/PRO21346Q6UXR6 183 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 TMEM25Q86YD3 366 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 CEP57L1Q8IYX8 460 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 DEFB119Q8N690 84 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 PARD3BQ8TEW8 1205 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 WBP2Q969T9 261 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 ZFRQ96KR1 1074 aaKnown RBP11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 XPO6Q96QU8 1125 aaKnown RBP11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 GZF1Q9H116 711 aaPredicted RBP11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 SDCBP2Q9H190 292 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 SLC32A1Q9H598 525 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 VRTNQ9H8Y1 702 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 KRT82Q9NSB4 513 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 TMEM74BQ9NUR3 256 aa11.18□□□□□ -0.62
CHMP2A-202ENST00000596708 TRIM24O15164 1050 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 HOXC11O43248 304 aaPredicted RBP11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 AP5Z1O43299 807 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 TLR5O60602 858 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 BEST1O76090 585 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 TOP3BO95985 862 aaKnown RBP11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 CFIP05156 583 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 ZDHHC11BP0C7U3 371 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 CCDC130P13994 396 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 HOXB2P14652 356 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 ENGP17813 658 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 TRIM21P19474 475 aaKnown RBP11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 ITPKAP23677 461 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 ME1P48163 572 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 TUBP50607 506 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 NDST1P52848 882 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 MAP3K7CLP57077 242 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 RPL6Q02878 288 aaKnown RBP11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 SGSM1Q2NKQ1 1148 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 SPDYCQ5MJ68 293 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 GRAMD4Q6IC98 578 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 SLC36A4Q6YBV0 504 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 TPGS1Q6ZTW0 290 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 ETFBKMTQ8IXQ9 262 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 GRAMD1CQ8IYS0 662 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 FUKQ8N0W3 1084 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 PHTF2Q8N3S3 785 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 TERB1Q8NA31 727 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 ZMIZ2Q8NF64 920 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 GOLGA5Q8TBA6 731 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 SLC2A14Q8TDB8 520 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 KCNV2Q8TDN2 545 aa11.17□□□□□ -0.62
CHMP2A-202ENST00000596708 ERLEC1Q96DZ1 483 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms