RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 LGALS16A8MUM7 142 aa23.06■■□□□ 1.28
HOMER3-206ENST00000594439 FOXN3O00409 490 aaPredicted RBP23.06■■□□□ 1.28
HOMER3-206ENST00000594439 PI15O43692 258 aa23.06■■□□□ 1.28
HOMER3-206ENST00000594439 GABBR2O75899 941 aa23.06■■□□□ 1.28
HOMER3-206ENST00000594439 ATP1A3P13637 1013 aa23.06■■□□□ 1.28
HOMER3-206ENST00000594439 GNA15P30679 374 aa23.06■■□□□ 1.28
HOMER3-206ENST00000594439 IQCB1Q15051 598 aa23.06■■□□□ 1.28
HOMER3-206ENST00000594439 FKBP15Q5T1M5 1219 aa23.06■■□□□ 1.28
HOMER3-206ENST00000594439 PM20D1Q6GTS8 502 aa23.06■■□□□ 1.28
HOMER3-206ENST00000594439 ZFRQ96KR1 1074 aaKnown RBP23.06■■□□□ 1.28
HOMER3-206ENST00000594439 ULBP1Q9BZM6 244 aa23.06■■□□□ 1.28
HOMER3-206ENST00000594439 LRRC4Q9HBW1 653 aa23.06■■□□□ 1.28
HOMER3-206ENST00000594439 HPS4Q9NQG7 708 aa23.06■■□□□ 1.28
HOMER3-206ENST00000594439 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.06■■□□□ 1.28
HOMER3-206ENST00000594439 GTSE1Q9NYZ3 720 aa23.06■■□□□ 1.28
HOMER3-206ENST00000594439 F5P12259 2224 aa23.05■■□□□ 1.28
HOMER3-206ENST00000594439 KANSL1LA0AUZ9 987 aa23.05■■□□□ 1.28
HOMER3-206ENST00000594439 STK25O00506 426 aa23.05■■□□□ 1.28
HOMER3-206ENST00000594439 PNMA6AP0CW24 399 aaPredicted RBP23.05■■□□□ 1.28
HOMER3-206ENST00000594439 UCHL3P15374 230 aa23.05■■□□□ 1.28
HOMER3-206ENST00000594439 RFX1P22670 979 aa23.05■■□□□ 1.28
HOMER3-206ENST00000594439 PSEN1P49768 467 aa23.05■■□□□ 1.28
HOMER3-206ENST00000594439 KLK7P49862 253 aa23.05■■□□□ 1.28
HOMER3-206ENST00000594439 MLLT6P55198 1093 aaPredicted RBP23.05■■□□□ 1.28
HOMER3-206ENST00000594439 MEA1Q16626 185 aa23.05■■□□□ 1.28
HOMER3-206ENST00000594439 TRIM68Q6AZZ1 485 aa23.05■■□□□ 1.28
HOMER3-206ENST00000594439 PMF1Q6P1K2 205 aa23.05■■□□□ 1.28
HOMER3-206ENST00000594439 CC2D1AQ6P1N0 951 aaPredicted RBP23.05■■□□□ 1.28
HOMER3-206ENST00000594439 DENND1BQ6P3S1 775 aa23.05■■□□□ 1.28
HOMER3-206ENST00000594439 BHLHA9Q7RTU4 235 aa23.05■■□□□ 1.28
HOMER3-206ENST00000594439 FAM71AQ8IYT1 594 aa23.05■■□□□ 1.28
HOMER3-206ENST00000594439 TTC16Q8NEE8 873 aa23.05■■□□□ 1.28
HOMER3-206ENST00000594439 OSCP1Q8WVF1 389 aa23.05■■□□□ 1.28
HOMER3-206ENST00000594439 FOXQ1Q9C009 403 aa23.05■■□□□ 1.28
HOMER3-206ENST00000594439 GANQ9H2C0 597 aa23.05■■□□□ 1.28
HOMER3-206ENST00000594439 NAGPAQ9UK23 515 aa23.05■■□□□ 1.28
HOMER3-206ENST00000594439 SIK3Q9Y2K2 1263 aa23.05■■□□□ 1.28
HOMER3-206ENST00000594439 PIAS3Q9Y6X2 628 aa23.05■■□□□ 1.28
HOMER3-206ENST00000594439 MIA3Q5JRA6 1907 aa23.05■■□□□ 1.28
HOMER3-206ENST00000594439 THAP12O43422 761 aa23.04■■□□□ 1.28
HOMER3-206ENST00000594439 MED7O43513 233 aa23.04■■□□□ 1.28
HOMER3-206ENST00000594439 TBX18O95935 607 aa23.04■■□□□ 1.28
HOMER3-206ENST00000594439 ZBED1O96006 694 aa23.04■■□□□ 1.28
HOMER3-206ENST00000594439 RARGP13631 454 aa23.04■■□□□ 1.28
HOMER3-206ENST00000594439 GLULP15104 373 aa23.04■■□□□ 1.28
HOMER3-206ENST00000594439 ARSAP15289 507 aa23.04■■□□□ 1.28
HOMER3-206ENST00000594439 COL9A1P20849 921 aa23.04■■□□□ 1.28
HOMER3-206ENST00000594439 CD72P21854 359 aa23.04■■□□□ 1.28
HOMER3-206ENST00000594439 CLCN1P35523 988 aa23.04■■□□□ 1.28
HOMER3-206ENST00000594439 GPD2P43304 727 aa23.04■■□□□ 1.28
HOMER3-206ENST00000594439 RGS7P49802 495 aa23.04■■□□□ 1.28
HOMER3-206ENST00000594439 ADIGQ0VDE8 80 aa23.04■■□□□ 1.28
HOMER3-206ENST00000594439 DRAP1Q14919 205 aaPredicted RBP23.04■■□□□ 1.28
HOMER3-206ENST00000594439 PDGFRLQ15198 375 aa23.04■■□□□ 1.28
HOMER3-206ENST00000594439 ZSCAN23Q3MJ62 389 aa23.04■■□□□ 1.28
HOMER3-206ENST00000594439 ZNF276Q8N554 614 aa23.04■■□□□ 1.28
HOMER3-206ENST00000594439 KIAA1958Q8N8K9 716 aa23.04■■□□□ 1.28
HOMER3-206ENST00000594439 TTC8Q8TAM2 541 aa23.04■■□□□ 1.28
HOMER3-206ENST00000594439 NDRG1Q92597 394 aaKnown RBP23.04■■□□□ 1.28
HOMER3-206ENST00000594439 LTB4R2Q9NPC1 389 aa23.04■■□□□ 1.28
HOMER3-206ENST00000594439 DUS2Q9NX74 493 aaKnown RBP23.04■■□□□ 1.28
HOMER3-206ENST00000594439 CLIC5Q9NZA1 410 aa23.04■■□□□ 1.28
HOMER3-206ENST00000594439 WNT6Q9Y6F9 365 aa23.04■■□□□ 1.28
HOMER3-206ENST00000594439 SOX9P48436 509 aa23.03■■□□□ 1.28
HOMER3-206ENST00000594439 KPNA1P52294 538 aaPredicted RBP23.03■■□□□ 1.28
HOMER3-206ENST00000594439 RUNX3Q13761 415 aa23.03■■□□□ 1.28
HOMER3-206ENST00000594439 RAPGEF1Q13905 1077 aa23.03■■□□□ 1.28
HOMER3-206ENST00000594439 ITPRIPL2Q3MIP1 535 aa23.03■■□□□ 1.28
HOMER3-206ENST00000594439 KLHDC10Q6PID8 442 aa23.03■■□□□ 1.28
HOMER3-206ENST00000594439 ZNF852Q6ZMS4 543 aa23.03■■□□□ 1.28
HOMER3-206ENST00000594439 DDX42Q86XP3 938 aaKnown RBP eCLIP23.03■■□□□ 1.28
HOMER3-206ENST00000594439 SCML4Q8N228 414 aa23.03■■□□□ 1.28
HOMER3-206ENST00000594439 ARHGAP18Q8N392 663 aa23.03■■□□□ 1.28
HOMER3-206ENST00000594439 PJA1Q8NG27 643 aa23.03■■□□□ 1.28
HOMER3-206ENST00000594439 HSFY1Q96LI6 401 aa23.03■■□□□ 1.28
HOMER3-206ENST00000594439 NACA2Q9H009 215 aa23.03■■□□□ 1.28
HOMER3-206ENST00000594439 EBF3Q9H4W6 596 aa23.03■■□□□ 1.28
HOMER3-206ENST00000594439 C8orf33Q9H7E9 229 aaPredicted RBP23.03■■□□□ 1.28
HOMER3-206ENST00000594439 CFAP97Q9P2B7 532 aa23.03■■□□□ 1.28
HOMER3-206ENST00000594439 NUDT5Q9UKK9 219 aa23.03■■□□□ 1.28
HOMER3-206ENST00000594439 MTF2Q9Y483 593 aaPredicted RBP23.03■■□□□ 1.28
HOMER3-206ENST00000594439 OTOL1A6NHN0 477 aaPredicted RBP23.02■■□□□ 1.28
HOMER3-206ENST00000594439 MAN2B1O00754 1011 aa23.02■■□□□ 1.28
HOMER3-206ENST00000594439 ATP5C1P36542 298 aaKnown RBP23.02■■□□□ 1.28
HOMER3-206ENST00000594439 IFNAR2P48551 515 aa23.02■■□□□ 1.28
HOMER3-206ENST00000594439 RPL34P49207 117 aaKnown RBP23.02■■□□□ 1.28
HOMER3-206ENST00000594439 YWHAGP61981 247 aaKnown RBP eCLIP23.02■■□□□ 1.28
HOMER3-206ENST00000594439 PTK2Q05397 1052 aa23.02■■□□□ 1.28
HOMER3-206ENST00000594439 SYCP1Q15431 976 aa23.02■■□□□ 1.28
HOMER3-206ENST00000594439 EML3Q32P44 896 aa23.02■■□□□ 1.28
HOMER3-206ENST00000594439 ZNF687Q8N1G0 1237 aa23.02■■□□□ 1.28
HOMER3-206ENST00000594439 SIX6OS1Q8N1H7 587 aa23.02■■□□□ 1.28
HOMER3-206ENST00000594439 MSANTD3Q96H12 275 aa23.02■■□□□ 1.28
HOMER3-206ENST00000594439 ERGIC2Q96RQ1 377 aa23.02■■□□□ 1.28
HOMER3-206ENST00000594439 KLF16Q9BXK1 252 aaPredicted RBP23.02■■□□□ 1.28
HOMER3-206ENST00000594439 STK33Q9BYT3 514 aa23.02■■□□□ 1.28
HOMER3-206ENST00000594439 OSBPL6Q9BZF3 934 aa23.02■■□□□ 1.28
HOMER3-206ENST00000594439 LINC00597Q9H2U6 94 aa23.02■■□□□ 1.28
HOMER3-206ENST00000594439 CBX8Q9HC52 389 aa23.02■■□□□ 1.28
HOMER3-206ENST00000594439 CNGB3Q9NQW8 809 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms