RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 GPRIN1Q7Z2K8 1008 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 UBA3Q8TBC4 463 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 KXD1Q9BQD3 176 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 TUBB2BQ9BVA1 445 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 MUC3AQ02505 3323 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 MYH10P35580 1976 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 ZNF840PA6NDX5 716 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 XPO1O14980 1071 aaKnown RBP20.65■□□□□ 0.9
LSM4-203ENST00000593829 CYP26A1O43174 497 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 ECI2O75521 394 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 GNG11P61952 73 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 PTK2Q05397 1052 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 PKDCCQ504Y2 493 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 PIGZQ86VD9 579 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 ARID3BQ8IVW6 561 aaPredicted RBP20.65■□□□□ 0.9
LSM4-203ENST00000593829 FAM71AQ8IYT1 594 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 CMTM8Q8IZV2 173 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 SLC44A3Q8N4M1 653 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 NEK11Q8NG66 645 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 ZNF606Q8WXB4 792 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 ELSPBP1Q96BH3 223 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 PANX2Q96RD6 677 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 RPP25Q9BUL9 199 aaKnown RBP20.65■□□□□ 0.9
LSM4-203ENST00000593829 TSPYL1Q9H0U9 437 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 TRPC7Q9HCX4 862 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 ACP6Q9NPH0 428 aa20.65■□□□□ 0.9
LSM4-203ENST00000593829 NCANO14594 1321 aa20.64■□□□□ 0.9
LSM4-203ENST00000593829 A0A1B0GTH6 734 aa20.64■□□□□ 0.89
LSM4-203ENST00000593829 M0QYV0 167 aa20.64■□□□□ 0.89
LSM4-203ENST00000593829 TEX33O43247 280 aa20.64■□□□□ 0.89
LSM4-203ENST00000593829 THAP12O43422 761 aa20.64■□□□□ 0.89
LSM4-203ENST00000593829 FCARP24071 287 aa20.64■□□□□ 0.89
LSM4-203ENST00000593829 AVPR1AP37288 418 aa20.64■□□□□ 0.89
LSM4-203ENST00000593829 KIF11P52732 1056 aa20.64■□□□□ 0.89
LSM4-203ENST00000593829 POLR2FP61218 127 aaKnown RBP20.64■□□□□ 0.89
LSM4-203ENST00000593829 GOLGA1Q92805 767 aa20.64■□□□□ 0.89
LSM4-203ENST00000593829 E2F7Q96AV8 911 aa20.64■□□□□ 0.89
LSM4-203ENST00000593829 ARFGAP3Q9NP61 516 aa20.64■□□□□ 0.89
LSM4-203ENST00000593829 PSD3Q9NYI0 1048 aa20.64■□□□□ 0.89
LSM4-203ENST00000593829 CHORDC1Q9UHD1 332 aaPredicted RBP20.64■□□□□ 0.89
LSM4-203ENST00000593829 SCML2Q9UQR0 700 aa20.64■□□□□ 0.89
LSM4-203ENST00000593829 PI4K2BG5E9Z4 385 aa20.63■□□□□ 0.89
LSM4-203ENST00000593829 ABL1P00519 1130 aa20.63■□□□□ 0.89
LSM4-203ENST00000593829 VIPR2P41587 438 aa20.63■□□□□ 0.89
LSM4-203ENST00000593829 BPIFB4P59827 614 aa20.63■□□□□ 0.89
LSM4-203ENST00000593829 BRD3Q15059 726 aa20.63■□□□□ 0.89
LSM4-203ENST00000593829 UBALD2Q8IYN6 164 aa20.63■□□□□ 0.89
LSM4-203ENST00000593829 WDR24Q96S15 920 aa20.63■□□□□ 0.89
LSM4-203ENST00000593829 TRAV19A0A0A6YYK7 116 aa20.63■□□□□ 0.89
LSM4-203ENST00000593829 CCDC151A5D8V7 595 aa20.63■□□□□ 0.89
LSM4-203ENST00000593829 C2orf78A6NCI8 922 aa20.63■□□□□ 0.89
LSM4-203ENST00000593829 EPHB6O15197 1021 aa20.63■□□□□ 0.89
LSM4-203ENST00000593829 PFKLP17858 780 aa20.63■□□□□ 0.89
LSM4-203ENST00000593829 PDE6CP51160 858 aa20.63■□□□□ 0.89
LSM4-203ENST00000593829 ZXDAP98168 799 aa20.63■□□□□ 0.89
LSM4-203ENST00000593829 GMIPQ9P107 970 aa20.63■□□□□ 0.89
LSM4-203ENST00000593829 USP3Q9Y6I4 520 aa20.63■□□□□ 0.89
LSM4-203ENST00000593829 PATJQ8NI35 1801 aa20.62■□□□□ 0.89
LSM4-203ENST00000593829 ERICH4A6NGS2 130 aa20.62■□□□□ 0.89
LSM4-203ENST00000593829 F8VZ95 297 aa20.62■□□□□ 0.89
LSM4-203ENST00000593829 SASH3O75995 380 aa20.62■□□□□ 0.89
LSM4-203ENST00000593829 GPS2Q13227 327 aa20.62■□□□□ 0.89
LSM4-203ENST00000593829 NR1I3Q14994 352 aa20.62■□□□□ 0.89
LSM4-203ENST00000593829 MEA1Q16626 185 aa20.62■□□□□ 0.89
LSM4-203ENST00000593829 RAB41Q5JT25 222 aa20.62■□□□□ 0.89
LSM4-203ENST00000593829 SNX30Q5VWJ9 437 aa20.62■□□□□ 0.89
LSM4-203ENST00000593829 GPIHBP1Q8IV16 184 aa20.62■□□□□ 0.89
LSM4-203ENST00000593829 SLC35F5Q8WV83 523 aa20.62■□□□□ 0.89
LSM4-203ENST00000593829 HNRNPLLQ8WVV9 542 aaKnown RBP20.62■□□□□ 0.89
LSM4-203ENST00000593829 SECISBP2LQ93073 1101 aaKnown RBP20.62■□□□□ 0.89
LSM4-203ENST00000593829 LRRC4Q9HBW1 653 aa20.62■□□□□ 0.89
LSM4-203ENST00000593829 NLRC4Q9NPP4 1024 aa20.62■□□□□ 0.89
LSM4-203ENST00000593829 TLR8Q9NR97 1041 aaKnown RBP20.62■□□□□ 0.89
LSM4-203ENST00000593829 DUSP12Q9UNI6 340 aa20.62■□□□□ 0.89
LSM4-203ENST00000593829 MYO10Q9HD67 2058 aa20.62■□□□□ 0.89
LSM4-203ENST00000593829 OBSL1O75147 1896 aa20.61■□□□□ 0.89
LSM4-203ENST00000593829 DENND4CQ5VZ89 1909 aa20.61■□□□□ 0.89
LSM4-203ENST00000593829 ZNF638Q14966 1978 aaKnown RBP20.61■□□□□ 0.89
LSM4-203ENST00000593829 DPYSL4O14531 572 aa20.61■□□□□ 0.89
LSM4-203ENST00000593829 USP17L7P0C7H9 530 aa20.61■□□□□ 0.89
LSM4-203ENST00000593829 ZDHHC11BP0C7U3 371 aa20.61■□□□□ 0.89
LSM4-203ENST00000593829 HDCP19113 662 aa20.61■□□□□ 0.89
LSM4-203ENST00000593829 SLC47A2Q86VL8 602 aa20.61■□□□□ 0.89
LSM4-203ENST00000593829 KCTD13Q8WZ19 329 aa20.61■□□□□ 0.89
LSM4-203ENST00000593829 EDAQ92838 391 aa20.61■□□□□ 0.89
LSM4-203ENST00000593829 SPAG5Q96R06 1193 aa20.61■□□□□ 0.89
LSM4-203ENST00000593829 CYP2S1Q96SQ9 504 aa20.61■□□□□ 0.89
LSM4-203ENST00000593829 PLA2G2FQ9BZM2 168 aa20.61■□□□□ 0.89
LSM4-203ENST00000593829 TMEM51Q9NW97 253 aa20.61■□□□□ 0.89
LSM4-203ENST00000593829 OBP2AQ9NY56 170 aa20.61■□□□□ 0.89
LSM4-203ENST00000593829 HEPACAM2A8MVW5 462 aa20.61■□□□□ 0.89
LSM4-203ENST00000593829 PRAMEF12O95522 483 aa20.61■□□□□ 0.89
LSM4-203ENST00000593829 CKMP06732 381 aa20.61■□□□□ 0.89
LSM4-203ENST00000593829 TKTL1P51854 596 aa20.61■□□□□ 0.89
LSM4-203ENST00000593829 HNRNPH2P55795 449 aaKnown RBP20.61■□□□□ 0.89
LSM4-203ENST00000593829 TOGARAM2Q6ZUX3 1019 aa20.61■□□□□ 0.89
LSM4-203ENST00000593829 CELF5Q8N6W0 485 aaKnown RBP20.61■□□□□ 0.89
LSM4-203ENST00000593829 ARL14EPQ8N8R7 260 aaPredicted RBP20.61■□□□□ 0.89
LSM4-203ENST00000593829 SLC22A12Q96S37 553 aa20.61■□□□□ 0.89
LSM4-203ENST00000593829 FUT8Q9BYC5 575 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms