RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 ADAMTS9Q9P2N4 1935 aa19.42■□□□□ 0.7
CIRBP-238ENST00000592412 SPAARA0A1B0GVQ0 90 aa19.41■□□□□ 0.7
CIRBP-238ENST00000592412 TMEM8BA6NDV4 472 aa19.41■□□□□ 0.7
CIRBP-238ENST00000592412 SRRM3A6NNA2 597 aaPredicted RBP19.41■□□□□ 0.7
CIRBP-238ENST00000592412 A8MXQ7 604 aa19.41■□□□□ 0.7
CIRBP-238ENST00000592412 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.41■□□□□ 0.7
CIRBP-238ENST00000592412 CLIC2O15247 247 aa19.41■□□□□ 0.7
CIRBP-238ENST00000592412 HOXC11O43248 304 aaPredicted RBP19.41■□□□□ 0.7
CIRBP-238ENST00000592412 GREM1O60565 184 aa19.41■□□□□ 0.7
CIRBP-238ENST00000592412 ZDHHC11BP0C7U3 371 aa19.41■□□□□ 0.7
CIRBP-238ENST00000592412 PDCP20941 246 aa19.41■□□□□ 0.7
CIRBP-238ENST00000592412 TNNC1P63316 161 aa19.41■□□□□ 0.7
CIRBP-238ENST00000592412 GAD2Q05329 585 aa19.41■□□□□ 0.7
CIRBP-238ENST00000592412 EHHADHQ08426 723 aa19.41■□□□□ 0.7
CIRBP-238ENST00000592412 TMEM25Q86YD3 366 aa19.41■□□□□ 0.7
CIRBP-238ENST00000592412 DEFB119Q8N690 84 aa19.41■□□□□ 0.7
CIRBP-238ENST00000592412 ZNF513Q8N8E2 541 aaPredicted RBP19.41■□□□□ 0.7
CIRBP-238ENST00000592412 PLEKHO2Q8TD55 490 aa19.41■□□□□ 0.7
CIRBP-238ENST00000592412 OTUB2Q96DC9 234 aa19.41■□□□□ 0.7
CIRBP-238ENST00000592412 DUSP9Q99956 384 aaKnown RBP19.41■□□□□ 0.7
CIRBP-238ENST00000592412 SMYD3Q9H7B4 428 aa19.41■□□□□ 0.7
CIRBP-238ENST00000592412 CAPN10Q9HC96 672 aa19.41■□□□□ 0.7
CIRBP-238ENST00000592412 KLK13Q9UKR3 277 aa19.41■□□□□ 0.7
CIRBP-238ENST00000592412 FASNP49327 2511 aaKnown RBP19.4■□□□□ 0.7
CIRBP-238ENST00000592412 A0A1W2PQF6 199 aa19.4■□□□□ 0.7
CIRBP-238ENST00000592412 FAM92AA1XBS5 289 aa19.4■□□□□ 0.7
CIRBP-238ENST00000592412 TBC1D3BA6NDS4 549 aa19.4■□□□□ 0.7
CIRBP-238ENST00000592412 UPK3BL1B0FP48 263 aa19.4■□□□□ 0.7
CIRBP-238ENST00000592412 UPK3BL2E5RIL1 263 aa19.4■□□□□ 0.7
CIRBP-238ENST00000592412 RTN3O95197 1032 aaPredicted RBP19.4■□□□□ 0.7
CIRBP-238ENST00000592412 NASPP49321 788 aaPredicted RBP19.4■□□□□ 0.7
CIRBP-238ENST00000592412 CYP2J2P51589 502 aa19.4■□□□□ 0.7
CIRBP-238ENST00000592412 SLC5A3P53794 718 aa19.4■□□□□ 0.7
CIRBP-238ENST00000592412 CDH8P55286 799 aa19.4■□□□□ 0.7
CIRBP-238ENST00000592412 FAM193AP78312 1265 aa19.4■□□□□ 0.7
CIRBP-238ENST00000592412 HECTD3Q5T447 861 aa19.4■□□□□ 0.7
CIRBP-238ENST00000592412 STXBP4Q6ZWJ1 553 aa19.4■□□□□ 0.7
CIRBP-238ENST00000592412 FAM35AQ86V20 835 aa19.4■□□□□ 0.7
CIRBP-238ENST00000592412 PGBD3Q8N328 593 aa19.4■□□□□ 0.7
CIRBP-238ENST00000592412 TERB1Q8NA31 727 aa19.4■□□□□ 0.7
CIRBP-238ENST00000592412 PDZD8Q8NEN9 1154 aa19.4■□□□□ 0.7
CIRBP-238ENST00000592412 SCFD1Q8WVM8 642 aa19.4■□□□□ 0.7
CIRBP-238ENST00000592412 ELMO3Q96BJ8 720 aa19.4■□□□□ 0.7
CIRBP-238ENST00000592412 SPHK2Q9NRA0 654 aa19.4■□□□□ 0.7
CIRBP-238ENST00000592412 GMIPQ9P107 970 aa19.4■□□□□ 0.7
CIRBP-238ENST00000592412 CALCOCO1Q9P1Z2 691 aa19.4■□□□□ 0.7
CIRBP-238ENST00000592412 NXF1Q9UBU9 619 aaKnown RBP19.4■□□□□ 0.7
CIRBP-238ENST00000592412 MTMR6Q9Y217 621 aa19.4■□□□□ 0.7
CIRBP-238ENST00000592412 NEUROG3Q9Y4Z2 214 aa19.4■□□□□ 0.7
CIRBP-238ENST00000592412 CEP192Q8TEP8 1941 aa19.4■□□□□ 0.7
CIRBP-238ENST00000592412 HOXD12P35452 270 aa19.39■□□□□ 0.69
CIRBP-238ENST00000592412 CASP4P49662 377 aa19.39■□□□□ 0.69
CIRBP-238ENST00000592412 TUBP50607 506 aa19.39■□□□□ 0.69
CIRBP-238ENST00000592412 FAM26FQ5R3K3 315 aa19.39■□□□□ 0.69
CIRBP-238ENST00000592412 C10orf76Q5T2E6 689 aa19.39■□□□□ 0.69
CIRBP-238ENST00000592412 CNNM4Q6P4Q7 775 aa19.39■□□□□ 0.69
CIRBP-238ENST00000592412 SLC41A1Q8IVJ1 513 aa19.39■□□□□ 0.69
CIRBP-238ENST00000592412 NELFCDQ8IXH7 590 aa19.39■□□□□ 0.69
CIRBP-238ENST00000592412 XXYLT1Q8NBI6 393 aa19.39■□□□□ 0.69
CIRBP-238ENST00000592412 ZMIZ2Q8NF64 920 aa19.39■□□□□ 0.69
CIRBP-238ENST00000592412 OR2I1PQ8NGU4 316 aa19.39■□□□□ 0.69
CIRBP-238ENST00000592412 ACOX2Q99424 681 aa19.39■□□□□ 0.69
CIRBP-238ENST00000592412 SDCBP2Q9H190 292 aa19.39■□□□□ 0.69
CIRBP-238ENST00000592412 DEC1Q9P2X7 70 aa19.39■□□□□ 0.69
CIRBP-238ENST00000592412 IGHV1OR15-9A0A0B4J2B8 117 aa19.38■□□□□ 0.69
CIRBP-238ENST00000592412 AP5Z1O43299 807 aa19.38■□□□□ 0.69
CIRBP-238ENST00000592412 CFIP05156 583 aa19.38■□□□□ 0.69
CIRBP-238ENST00000592412 WASP42768 502 aa19.38■□□□□ 0.69
CIRBP-238ENST00000592412 ASIC1P78348 528 aa19.38■□□□□ 0.69
CIRBP-238ENST00000592412 SIM1P81133 766 aaPredicted RBP19.38■□□□□ 0.69
CIRBP-238ENST00000592412 RPL6Q02878 288 aaKnown RBP19.38■□□□□ 0.69
CIRBP-238ENST00000592412 BYSLQ13895 437 aaKnown RBP19.38■□□□□ 0.69
CIRBP-238ENST00000592412 EGFLAMQ63HQ2 1017 aa19.38■□□□□ 0.69
CIRBP-238ENST00000592412 FUKQ8N0W3 1084 aa19.38■□□□□ 0.69
CIRBP-238ENST00000592412 LINC00301Q8NCQ3 95 aa19.38■□□□□ 0.69
CIRBP-238ENST00000592412 KCNV2Q8TDN2 545 aa19.38■□□□□ 0.69
CIRBP-238ENST00000592412 ZCCHC14Q8WYQ9 949 aaKnown RBP19.38■□□□□ 0.69
CIRBP-238ENST00000592412 SLC32A1Q9H598 525 aa19.38■□□□□ 0.69
CIRBP-238ENST00000592412 VRTNQ9H8Y1 702 aa19.38■□□□□ 0.69
CIRBP-238ENST00000592412 CD93Q9NPY3 652 aa19.38■□□□□ 0.69
CIRBP-238ENST00000592412 SLC6A14Q9UN76 642 aa19.38■□□□□ 0.69
CIRBP-238ENST00000592412 MSRB2Q9Y3D2 182 aa19.38■□□□□ 0.69
CIRBP-238ENST00000592412 SH3BP1Q9Y3L3 701 aa19.38■□□□□ 0.69
CIRBP-238ENST00000592412 STARD13Q9Y3M8 1113 aa19.38■□□□□ 0.69
CIRBP-238ENST00000592412 BEST1O76090 585 aa19.37■□□□□ 0.69
CIRBP-238ENST00000592412 SERPINF2P08697 491 aa19.37■□□□□ 0.69
CIRBP-238ENST00000592412 IRF1P10914 325 aa19.37■□□□□ 0.69
CIRBP-238ENST00000592412 HOXB2P14652 356 aa19.37■□□□□ 0.69
CIRBP-238ENST00000592412 CASP1P29466 404 aa19.37■□□□□ 0.69
CIRBP-238ENST00000592412 ATICP31939 592 aa19.37■□□□□ 0.69
CIRBP-238ENST00000592412 DPP6P42658 865 aa19.37■□□□□ 0.69
CIRBP-238ENST00000592412 ZNF33AQ06730 810 aa19.37■□□□□ 0.69
CIRBP-238ENST00000592412 COL9A2Q14055 689 aaPredicted RBP19.37■□□□□ 0.69
CIRBP-238ENST00000592412 DUOXA1Q1HG43 343 aa19.37■□□□□ 0.69
CIRBP-238ENST00000592412 ANO4Q32M45 955 aa19.37■□□□□ 0.69
CIRBP-238ENST00000592412 ERLEC1Q96DZ1 483 aa19.37■□□□□ 0.69
CIRBP-238ENST00000592412 P2RY11Q96G91 374 aa19.37■□□□□ 0.69
CIRBP-238ENST00000592412 SMOQ99835 787 aa19.37■□□□□ 0.69
CIRBP-238ENST00000592412 GTPBP2Q9BX10 602 aaKnown RBP19.37■□□□□ 0.69
CIRBP-238ENST00000592412 DMAP1Q9NPF5 467 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms