RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 KIAA0895Q8NCT3 520 aa10.74□□□□□ -0.69
VMP1-214ENST00000592106 TMEM174Q8WUU8 243 aa10.74□□□□□ -0.69
VMP1-214ENST00000592106 EZH1Q92800 747 aaPredicted RBP10.74□□□□□ -0.69
VMP1-214ENST00000592106 PAGE5Q96GU1 130 aa10.74□□□□□ -0.69
VMP1-214ENST00000592106 CNOT6LQ96LI5 555 aaKnown RBP10.74□□□□□ -0.69
VMP1-214ENST00000592106 KCNK17Q96T54 332 aa10.74□□□□□ -0.69
VMP1-214ENST00000592106 TPSD1Q9BZJ3 242 aa10.74□□□□□ -0.69
VMP1-214ENST00000592106 RNF38Q9H0F5 515 aa10.74□□□□□ -0.69
VMP1-214ENST00000592106 DUSP15Q9H1R2 295 aaPredicted RBP10.74□□□□□ -0.69
VMP1-214ENST00000592106 ARHGEF4Q9NR80 690 aa10.74□□□□□ -0.69
VMP1-214ENST00000592106 TLR8Q9NR97 1041 aaKnown RBP10.74□□□□□ -0.69
VMP1-214ENST00000592106 DMAC2Q9NW81 257 aa10.74□□□□□ -0.69
VMP1-214ENST00000592106 LSM7Q9UK45 103 aaKnown RBP10.74□□□□□ -0.69
VMP1-214ENST00000592106 RCOR1Q9UKL0 485 aa10.74□□□□□ -0.69
VMP1-214ENST00000592106 NME7Q9Y5B8 376 aa10.74□□□□□ -0.69
VMP1-214ENST00000592106 ATP6V1DQ9Y5K8 247 aa10.74□□□□□ -0.69
VMP1-214ENST00000592106 K7EQS6 105 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 MAPK13O15264 365 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 ZBTB24O43167 697 aaPredicted RBP10.73□□□□□ -0.69
VMP1-214ENST00000592106 COCHO43405 550 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 KAT7O95251 611 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 CAVIN2O95810 425 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 CMA1P23946 247 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 RPL13P26373 211 aaKnown RBP10.73□□□□□ -0.69
VMP1-214ENST00000592106 HOXC13P31276 330 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 GRIA2P42262 883 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 DPP6P42658 865 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 SYKP43405 635 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 TNFRSF4P43489 277 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 VAMP7P51809 220 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 CDH8P55286 799 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 KDSRQ06136 332 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 STK4Q13043 487 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 CCDC6Q16204 474 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 CRY1Q16526 586 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 PLA2G2CQ5R387 149 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 SNX30Q5VWJ9 437 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 PMS2CLQ68D20 193 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 RNF43Q68DV7 783 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 ANO7Q6IWH7 933 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 INTS8Q75QN2 995 aaKnown RBP10.73□□□□□ -0.69
VMP1-214ENST00000592106 CYP2U1Q7Z449 544 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 ACOT1Q86TX2 421 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 RASSF3Q86WH2 238 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 TTC30AQ86WT1 665 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 ADGRG2Q8IZP9 1017 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 PLEKHO2Q8TD55 490 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 WHAMMQ8TF30 809 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 DUSP9Q99956 384 aaKnown RBP10.73□□□□□ -0.69
VMP1-214ENST00000592106 EDEM2Q9BV94 578 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 GZF1Q9H116 711 aaPredicted RBP10.73□□□□□ -0.69
VMP1-214ENST00000592106 KCTD10Q9H3F6 313 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 TMEM30AQ9NV96 361 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 GMIPQ9P107 970 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 BCCIPQ9P287 314 aaKnown RBP eCLIP10.73□□□□□ -0.69
VMP1-214ENST00000592106 TRAF3IP3Q9Y228 551 aa10.73□□□□□ -0.69
VMP1-214ENST00000592106 MYO16Q9Y6X6 1858 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 SPAG17Q6Q759 2223 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 A0A1B0GVL5 298 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 BCLAF3A2AJT9 711 aaKnown RBP10.72□□□□□ -0.69
VMP1-214ENST00000592106 PPP1R3GB7ZBB8 358 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 HOXC11O43248 304 aaPredicted RBP10.72□□□□□ -0.69
VMP1-214ENST00000592106 TLR5O60602 858 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 VNN1O95497 513 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 KLF8O95600 359 aaPredicted RBP10.72□□□□□ -0.69
VMP1-214ENST00000592106 ASS1P00966 412 aaKnown RBP10.72□□□□□ -0.69
VMP1-214ENST00000592106 HLA-DRAP01903 254 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 IRF1P10914 325 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 CCDC130P13994 396 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 NR2F2P24468 414 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 NDST1P52848 882 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 ZXDBP98169 803 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 ENPEPQ07075 957 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 NFIL3Q16649 462 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 LY6G5CQ5SRR4 150 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 STPG1Q5TH74 334 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 DAB2IPQ5VWQ8 1189 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 SV2AQ7L0J3 742 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 LPCAT2Q7L5N7 544 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 TADA2BQ86TJ2 420 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 CRYBG2Q8N1P7 616 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 CCDC33Q8N5R6 958 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 TXNDC5Q8NBS9 432 aaKnown RBP10.72□□□□□ -0.69
VMP1-214ENST00000592106 SLC2A14Q8TDB8 520 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 CNTNAP3BQ96NU0 1288 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 XPO6Q96QU8 1125 aaKnown RBP10.72□□□□□ -0.69
VMP1-214ENST00000592106 KCNK16Q96T55 309 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 NT5C1AQ9BXI3 368 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 SLC4A5Q9BY07 1137 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 CNTNAP3Q9BZ76 1288 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 CYP3A43Q9HB55 503 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.72□□□□□ -0.69
VMP1-214ENST00000592106 POLR3BQ9NW08 1133 aaPredicted RBP10.72□□□□□ -0.69
VMP1-214ENST00000592106 CHORDC1Q9UHD1 332 aaPredicted RBP10.72□□□□□ -0.69
VMP1-214ENST00000592106 PCDHA5Q9Y5H7 936 aa10.72□□□□□ -0.69
VMP1-214ENST00000592106 FAM92AA1XBS5 289 aa10.71□□□□□ -0.69
VMP1-214ENST00000592106 TBC1D3BA6NDS4 549 aa10.71□□□□□ -0.69
VMP1-214ENST00000592106 TK2O00142 265 aa10.71□□□□□ -0.69
VMP1-214ENST00000592106 TNFRSF10BO14763 440 aa10.71□□□□□ -0.69
VMP1-214ENST00000592106 SCAMP3O14828 347 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms