RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 CCR3P51677 355 aa14.69□□□□□ -0.06
CLIP3-205ENST00000592017 SLC8A3P57103 927 aa14.69□□□□□ -0.06
CLIP3-205ENST00000592017 GCNT1Q02742 428 aa14.69□□□□□ -0.06
CLIP3-205ENST00000592017 EXOC3L4Q17RC7 722 aa14.69□□□□□ -0.06
CLIP3-205ENST00000592017 TMEM196Q5HYL7 178 aa14.69□□□□□ -0.06
CLIP3-205ENST00000592017 CT47A1Q5JQC4 288 aaPredicted RBP14.69□□□□□ -0.06
CLIP3-205ENST00000592017 DGKKQ5KSL6 1271 aa14.69□□□□□ -0.06
CLIP3-205ENST00000592017 ARHGAP17Q68EM7 881 aa14.69□□□□□ -0.06
CLIP3-205ENST00000592017 FSTL4Q6MZW2 842 aa14.69□□□□□ -0.06
CLIP3-205ENST00000592017 GJB7Q6PEY0 223 aa14.69□□□□□ -0.06
CLIP3-205ENST00000592017 TRIM65Q6PJ69 517 aa14.69□□□□□ -0.06
CLIP3-205ENST00000592017 GBP6Q6ZN66 633 aa14.69□□□□□ -0.06
CLIP3-205ENST00000592017 RBBP8NLQ8NC74 664 aaPredicted RBP14.69□□□□□ -0.06
CLIP3-205ENST00000592017 OSCP1Q8WVF1 389 aa14.69□□□□□ -0.06
CLIP3-205ENST00000592017 OVCA2Q8WZ82 227 aa14.69□□□□□ -0.06
CLIP3-205ENST00000592017 TUBGCP2Q9BSJ2 902 aa14.69□□□□□ -0.06
CLIP3-205ENST00000592017 UBE2TQ9NPD8 197 aaPredicted RBP14.69□□□□□ -0.06
CLIP3-205ENST00000592017 COMMD8Q9NX08 183 aa14.69□□□□□ -0.06
CLIP3-205ENST00000592017 HESX1Q9UBX0 185 aa14.69□□□□□ -0.06
CLIP3-205ENST00000592017 TSPAN16Q9UKR8 245 aa14.69□□□□□ -0.06
CLIP3-205ENST00000592017 TRDMT1O14717 391 aaKnown RBP14.68□□□□□ -0.06
CLIP3-205ENST00000592017 OLFM2O95897 454 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 OAS1P00973 400 aaKnown RBP14.68□□□□□ -0.06
CLIP3-205ENST00000592017 MBL2P11226 248 aaPredicted RBP14.68□□□□□ -0.06
CLIP3-205ENST00000592017 VDRP11473 427 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 TCF3P15923 654 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 PFKLP17858 780 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 SLC9A1P19634 815 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 GJA4P35212 333 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 GALK1P51570 392 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 BCAT1P54687 386 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 SLC7A9P82251 487 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 APBA1Q02410 837 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 DMWDQ09019 674 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 EML3Q32P44 896 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 VWA3BQ502W6 1294 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 PKN3Q6P5Z2 889 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 TTC30AQ86WT1 665 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 DCLK2Q8N568 766 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 ENOX1Q8TC92 643 aaKnown RBP14.68□□□□□ -0.06
CLIP3-205ENST00000592017 KREMEN1Q96MU8 473 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 FAM126AQ9BYI3 521 aaPredicted RBP14.68□□□□□ -0.06
CLIP3-205ENST00000592017 NACA2Q9H009 215 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 ECT2Q9H8V3 914 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 PNPLA8Q9NP80 782 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 TAB2Q9NYJ8 693 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 IL37Q9NZH6 218 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 CPQQ9Y646 472 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 TICRRQ7Z2Z1 1910 aa14.68□□□□□ -0.06
CLIP3-205ENST00000592017 K7ESF4 209 aa14.67□□□□□ -0.06
CLIP3-205ENST00000592017 RNF225M0QZC1 329 aaPredicted RBP14.67□□□□□ -0.06
CLIP3-205ENST00000592017 LEFTY2O00292 366 aa14.67□□□□□ -0.06
CLIP3-205ENST00000592017 COCHO43405 550 aa14.67□□□□□ -0.06
CLIP3-205ENST00000592017 PAEPP09466 180 aa14.67□□□□□ -0.06
CLIP3-205ENST00000592017 BRD2P25440 801 aaKnown RBP14.67□□□□□ -0.06
CLIP3-205ENST00000592017 IFNAR2P48551 515 aa14.67□□□□□ -0.06
CLIP3-205ENST00000592017 PGFP49763 221 aa14.67□□□□□ -0.06
CLIP3-205ENST00000592017 TYRO3Q06418 890 aa14.67□□□□□ -0.06
CLIP3-205ENST00000592017 GRSF1Q12849 480 aaKnown RBP eCLIP14.67□□□□□ -0.06
CLIP3-205ENST00000592017 ARHGAP44Q17R89 818 aa14.67□□□□□ -0.06
CLIP3-205ENST00000592017 TCP11X2Q5H9J9 407 aa14.67□□□□□ -0.06
CLIP3-205ENST00000592017 HECTD3Q5T447 861 aa14.67□□□□□ -0.06
CLIP3-205ENST00000592017 PIGZQ86VD9 579 aa14.67□□□□□ -0.06
CLIP3-205ENST00000592017 SYNPOQ8N3V7 929 aa14.67□□□□□ -0.06
CLIP3-205ENST00000592017 ANKRD52Q8NB46 1076 aa14.67□□□□□ -0.06
CLIP3-205ENST00000592017 UBA3Q8TBC4 463 aa14.67□□□□□ -0.06
CLIP3-205ENST00000592017 TFAP2BQ92481 460 aa14.67□□□□□ -0.06
CLIP3-205ENST00000592017 NDST4Q9H3R1 872 aa14.67□□□□□ -0.06
CLIP3-205ENST00000592017 CCSER2Q9H7U1 834 aa14.67□□□□□ -0.06
CLIP3-205ENST00000592017 TLR8Q9NR97 1041 aaKnown RBP14.67□□□□□ -0.06
CLIP3-205ENST00000592017 SCML2Q9UQR0 700 aa14.67□□□□□ -0.06
CLIP3-205ENST00000592017 NUP210Q8TEM1 1887 aaPredicted RBP14.67□□□□□ -0.06
CLIP3-205ENST00000592017 A0A1W2PQH9 124 aa14.66□□□□□ -0.06
CLIP3-205ENST00000592017 FAM92AA1XBS5 289 aa14.66□□□□□ -0.06
CLIP3-205ENST00000592017 CHURC1-FNTBB4DL54 471 aa14.66□□□□□ -0.06
CLIP3-205ENST00000592017 M0QYV0 167 aa14.66□□□□□ -0.06
CLIP3-205ENST00000592017 TULP2O00295 520 aa14.66□□□□□ -0.06
CLIP3-205ENST00000592017 O00370 1275 aa14.66□□□□□ -0.06
CLIP3-205ENST00000592017 SCAMP3O14828 347 aaKnown RBP14.66□□□□□ -0.06
CLIP3-205ENST00000592017 PAPSS2O95340 614 aaPredicted RBP14.66□□□□□ -0.06
CLIP3-205ENST00000592017 EGFP01133 1207 aa14.66□□□□□ -0.06
CLIP3-205ENST00000592017 IRF1P10914 325 aa14.66□□□□□ -0.06
CLIP3-205ENST00000592017 PON1P27169 355 aa14.66□□□□□ -0.06
CLIP3-205ENST00000592017 USP8P40818 1118 aa14.66□□□□□ -0.06
CLIP3-205ENST00000592017 FNTBP49356 437 aa14.66□□□□□ -0.06
CLIP3-205ENST00000592017 KIF11P52732 1056 aa14.66□□□□□ -0.06
CLIP3-205ENST00000592017 MFAP3P55082 362 aa14.66□□□□□ -0.06
CLIP3-205ENST00000592017 PDE4CQ08493 712 aa14.66□□□□□ -0.06
CLIP3-205ENST00000592017 BST2Q10589 180 aaKnown RBP14.66□□□□□ -0.06
CLIP3-205ENST00000592017 MIIPQ5JXC2 388 aa14.66□□□□□ -0.06
CLIP3-205ENST00000592017 CPA6Q8N4T0 437 aa14.66□□□□□ -0.06
CLIP3-205ENST00000592017 RUBCNQ92622 972 aa14.66□□□□□ -0.06
CLIP3-205ENST00000592017 EZH1Q92800 747 aaPredicted RBP14.66□□□□□ -0.06
CLIP3-205ENST00000592017 ATP2A3Q93084 1043 aa14.66□□□□□ -0.06
CLIP3-205ENST00000592017 EPC1Q9H2F5 836 aa14.66□□□□□ -0.06
CLIP3-205ENST00000592017 POLR3BQ9NW08 1133 aaPredicted RBP14.66□□□□□ -0.06
CLIP3-205ENST00000592017 APEX2Q9UBZ4 518 aa14.66□□□□□ -0.06
CLIP3-205ENST00000592017 NAGPAQ9UK23 515 aa14.66□□□□□ -0.06
CLIP3-205ENST00000592017 KIAA1257Q9ULG3 409 aa14.66□□□□□ -0.06
CLIP3-205ENST00000592017 MIA3Q5JRA6 1907 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms