RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 NOMO1Q15155 1222 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 TRIM71Q2Q1W2 868 aaKnown RBP10.84□□□□□ -0.67
VPS25-206ENST00000591584 SMTNL2Q2TAL5 461 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 P3H1Q32P28 736 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 SLC25A52Q3SY17 297 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 KCTD16Q68DU8 428 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 SLC9A4Q6AI14 798 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 SCYL2Q6P3W7 929 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 CENPUQ71F23 418 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 PPIL6Q8IXY8 311 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 FUKQ8N0W3 1084 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 CNPY4Q8N129 248 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 SLC43A3Q8NBI5 491 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 IRGQQ8WZA9 623 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 CENPTQ96BT3 561 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 ZFP42Q96MM3 310 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 FERMT1Q9BQL6 677 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 SYT15Q9BQS2 421 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 MED10Q9BTT4 135 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 CALN1Q9BXU9 219 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 CDC42EP4Q9H3Q1 356 aaKnown RBP10.84□□□□□ -0.67
VPS25-206ENST00000591584 AGO3Q9H9G7 860 aaKnown RBP10.84□□□□□ -0.67
VPS25-206ENST00000591584 NGRNQ9NPE2 291 aaKnown RBP10.84□□□□□ -0.67
VPS25-206ENST00000591584 AAASQ9NRG9 546 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 RGS18Q9NS28 235 aa10.84□□□□□ -0.67
VPS25-206ENST00000591584 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.84□□□□□ -0.67
VPS25-206ENST00000591584 BCLAF3A2AJT9 711 aaKnown RBP10.83□□□□□ -0.68
VPS25-206ENST00000591584 E7EVH7 732 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 M0QZQ0 153 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 TULP2O00295 520 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 ALOX15BO15296 676 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 F9P00740 461 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 RBP3P10745 1247 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 GHRP10912 638 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 LCP1P13796 627 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 MDH1P40925 334 aaKnown RBP10.83□□□□□ -0.68
VPS25-206ENST00000591584 MAGEA4P43358 317 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 SCNN1GP51170 649 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 IRAK1P51617 712 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 CLCNKBP51801 687 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 HDAC4P56524 1084 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 BCAR1P56945 870 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 FAM189BP81408 668 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 ATP11AP98196 1134 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 ROR1Q01973 937 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 GPS1Q13098 491 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 NR1H3Q13133 447 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 TRIP13Q15645 432 aaPredicted RBP10.83□□□□□ -0.68
VPS25-206ENST00000591584 C15orf59Q2T9L4 293 aaPredicted RBP10.83□□□□□ -0.68
VPS25-206ENST00000591584 ANKRD20A8PQ5CZ79 823 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 TNFAIP8L3Q5GJ75 292 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 ZNF618Q5T7W0 954 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 CYP4V2Q6ZWL3 525 aaPredicted RBP10.83□□□□□ -0.68
VPS25-206ENST00000591584 BEND5Q7L4P6 421 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 CCDC25Q86WR0 208 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 ECHDC2Q86YB7 292 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 SIX6OS1Q8N1H7 587 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 WNT8BQ93098 351 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 NT5C3BQ969T7 300 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 SMARCD1Q96GM5 515 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 PEBP4Q96S96 227 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 ADAM2Q99965 735 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 CENPHQ9H3R5 247 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 GOLGA2P5Q9HBQ8 144 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 POPDC2Q9HBU9 364 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 PCDH18Q9HCL0 1135 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 HMX1Q9NP08 348 aaPredicted RBP10.83□□□□□ -0.68
VPS25-206ENST00000591584 PNPLA8Q9NP80 782 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 MIOSQ9NXC5 875 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 PAK5Q9P286 719 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 BCCIPQ9P287 314 aaKnown RBP eCLIP10.83□□□□□ -0.68
VPS25-206ENST00000591584 FETUBQ9UGM5 382 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 NOVA2Q9UNW9 492 aaKnown RBP10.83□□□□□ -0.68
VPS25-206ENST00000591584 RAD54BQ9Y620 910 aa10.83□□□□□ -0.68
VPS25-206ENST00000591584 A0A087WUV0 522 aaPredicted RBP10.82□□□□□ -0.68
VPS25-206ENST00000591584 HACD1B0YJ81 288 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 TMEM189-UBE2V1I3L0A0 370 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 AOC2O75106 756 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 GRAP2O75791 330 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 GABBR2O75899 941 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 IFNB1P01574 187 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 ELNP15502 786 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 ATP2A2P16615 1042 aaKnown RBP10.82□□□□□ -0.68
VPS25-206ENST00000591584 IL4RP24394 825 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 PHBP35232 272 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 ARL4AP40617 200 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 ARL4CP56559 192 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 GNGT1P63211 74 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 BFSP2Q13515 415 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 RASA2Q15283 850 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 ZSCAN26Q16670 478 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 CDO1Q16878 200 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 RAB41Q5JT25 222 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 RNASEH2BQ5TBB1 312 aaKnown RBP10.82□□□□□ -0.68
VPS25-206ENST00000591584 TRNP1Q6NT89 227 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 FAM171BQ6P995 826 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 DARS2Q6PI48 645 aaKnown RBP10.82□□□□□ -0.68
VPS25-206ENST00000591584 CLEC20AQ6ZU45 233 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 PAQR9Q6ZVX9 377 aa10.82□□□□□ -0.68
VPS25-206ENST00000591584 SLC24A5Q71RS6 500 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms