RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 CNTN6Q9UQ52 1028 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 NFE2L3Q9Y4A8 694 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 WNT6Q9Y6F9 365 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 USP3Q9Y6I4 520 aa9.69□□□□□ -0.86
DNMT1-223ENST00000591239 KIF26AQ9ULI4 1882 aaPredicted RBP9.68□□□□□ -0.86
DNMT1-223ENST00000591239 A0A1W2PQH9 124 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 H0Y858 1186 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 TULP2O00295 520 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 PES1O00541 588 aaKnown RBP9.68□□□□□ -0.86
DNMT1-223ENST00000591239 XPO1O14980 1071 aaKnown RBP9.68□□□□□ -0.86
DNMT1-223ENST00000591239 TLR5O60602 858 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 TBX18O95935 607 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 CALCAP01258 141 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 KRT5P13647 590 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 BRD2P25440 801 aaKnown RBP9.68□□□□□ -0.86
DNMT1-223ENST00000591239 EEF1GP26641 437 aaKnown RBP9.68□□□□□ -0.86
DNMT1-223ENST00000591239 RPS9P46781 194 aaKnown RBP9.68□□□□□ -0.86
DNMT1-223ENST00000591239 IFNAR2P48551 515 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 MFAP3P55082 362 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 APBA1Q02410 837 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 NHLH1Q02575 133 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 PDE4CQ08493 712 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 STILQ15468 1287 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 CNGA2Q16280 664 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 STX1AQ16623 288 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 EML3Q32P44 896 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 PKDCCQ504Y2 493 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 RAB41Q5JT25 222 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 GJB7Q6PEY0 223 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 TXNDC11Q6PKC3 985 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 LCLAT1Q6UWP7 414 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 C11orf57Q6ZUT1 292 aaPredicted RBP9.68□□□□□ -0.86
DNMT1-223ENST00000591239 DDX42Q86XP3 938 aaKnown RBP eCLIP9.68□□□□□ -0.86
DNMT1-223ENST00000591239 KIAA1958Q8N8K9 716 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 UBA3Q8TBC4 463 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 ATP2A3Q93084 1043 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 ZFRQ96KR1 1074 aaKnown RBP9.68□□□□□ -0.86
DNMT1-223ENST00000591239 FAM81BQ96LP2 452 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 ZSWIM1Q9BR11 485 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 NACA2Q9H009 215 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 LINC00597Q9H2U6 94 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 NMUR1Q9HB89 426 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 CYLDQ9NQC7 956 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 CFAP97Q9P2B7 532 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 APEX2Q9UBZ4 518 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 NAGPAQ9UK23 515 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.68□□□□□ -0.86
DNMT1-223ENST00000591239 CACNA1HO95180 2353 aa9.68□□□□□ -0.86
DNMT1-223ENST00000591239 HELZP42694 1942 aaKnown RBP9.67□□□□□ -0.86
DNMT1-223ENST00000591239 MIA3Q5JRA6 1907 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 E2F8A0AVK6 867 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 SLC9A3R1O14745 358 aaPredicted RBP9.67□□□□□ -0.86
DNMT1-223ENST00000591239 ZBED1O96006 694 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 SETSIPP0DME0 302 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 RARGP13631 454 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 ATP5C1P36542 298 aaKnown RBP9.67□□□□□ -0.86
DNMT1-223ENST00000591239 PLA2G5P39877 138 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 MAGEA9P43362 315 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 PLA2G4AP47712 749 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 PSEN1P49768 467 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 TKTL1P51854 596 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 TYRO3Q06418 890 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 PON2Q15165 354 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 ANGPT1Q15389 498 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 ARHGAP44Q17R89 818 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 CDKAL1Q5VV42 579 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 PM20D1Q6GTS8 502 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 CAVIN1Q6NZI2 390 aaKnown RBP9.67□□□□□ -0.86
DNMT1-223ENST00000591239 SCD5Q86SK9 330 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 C1orf210Q8IVY1 113 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 ADGRG2Q8IZP9 1017 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 CPA6Q8N4T0 437 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 SLC35F5Q8WV83 523 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 FAM122AQ96E09 287 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 CHFRQ96EP1 664 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 IRF2BPLQ9H1B7 796 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 ECT2Q9H8V3 914 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 LMAN1LQ9HAT1 526 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 SIX2Q9NPC8 291 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.67□□□□□ -0.86
DNMT1-223ENST00000591239 FANCLQ9NW38 375 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 CLIC5Q9NZA1 410 aa9.67□□□□□ -0.86
DNMT1-223ENST00000591239 BECN2A8MW95 431 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 M0QYV0 167 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 SCAMP3O14828 347 aaKnown RBP9.66□□□□□ -0.86
DNMT1-223ENST00000591239 LETM1O95202 739 aaPredicted RBP9.66□□□□□ -0.86
DNMT1-223ENST00000591239 NFATC1O95644 943 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 CHRNB1P11230 501 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 RALAP11233 206 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 GJA4P35212 333 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 USP8P40818 1118 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 AMPD2Q01433 879 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 MYL5Q02045 173 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 ADIGQ0VDE8 80 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 KCNMA1Q12791 1236 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 NR1H3Q13133 447 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 C10orf120Q5SQS8 335 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 PMF1Q6P1K2 205 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 KLHDC10Q6PID8 442 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 TADA2BQ86TJ2 420 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms