RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 TUBP50607 506 aa17.8■□□□□ 0.44
SCAMP4-211ENST00000588907 KIF5AQ12840 1032 aa17.8■□□□□ 0.44
SCAMP4-211ENST00000588907 IFRD2Q12894 506 aaPredicted RBP17.8■□□□□ 0.44
SCAMP4-211ENST00000588907 TAF10Q12962 218 aa17.8■□□□□ 0.44
SCAMP4-211ENST00000588907 FAM102AQ5T9C2 384 aaPredicted RBP17.8■□□□□ 0.44
SCAMP4-211ENST00000588907 SNX30Q5VWJ9 437 aa17.8■□□□□ 0.44
SCAMP4-211ENST00000588907 PLEKHA7Q6IQ23 1121 aa17.8■□□□□ 0.44
SCAMP4-211ENST00000588907 CES5AQ6NT32 575 aa17.8■□□□□ 0.44
SCAMP4-211ENST00000588907 ZNF662Q6ZS27 426 aa17.8■□□□□ 0.44
SCAMP4-211ENST00000588907 PDZD4Q76G19 769 aaPredicted RBP17.8■□□□□ 0.44
SCAMP4-211ENST00000588907 ZNF276Q8N554 614 aa17.8■□□□□ 0.44
SCAMP4-211ENST00000588907 RFFLQ8WZ73 363 aa17.8■□□□□ 0.44
SCAMP4-211ENST00000588907 SMG7Q92540 1137 aaKnown RBP17.8■□□□□ 0.44
SCAMP4-211ENST00000588907 THAP2Q9H0W7 228 aa17.8■□□□□ 0.44
SCAMP4-211ENST00000588907 POPDC2Q9HBU9 364 aa17.8■□□□□ 0.44
SCAMP4-211ENST00000588907 ABCC13Q9NSE7 274 aa17.8■□□□□ 0.44
SCAMP4-211ENST00000588907 CLDND1Q9NY35 253 aa17.8■□□□□ 0.44
SCAMP4-211ENST00000588907 RRN3Q9NYV6 651 aa17.8■□□□□ 0.44
SCAMP4-211ENST00000588907 ZNF638Q14966 1978 aaKnown RBP17.8■□□□□ 0.44
SCAMP4-211ENST00000588907 SIGLEC16A6NMB1 481 aa17.79■□□□□ 0.44
SCAMP4-211ENST00000588907 BTNL10A8MVZ5 291 aa17.79■□□□□ 0.44
SCAMP4-211ENST00000588907 LTFP02788 710 aa17.79■□□□□ 0.44
SCAMP4-211ENST00000588907 RALAP11233 206 aa17.79■□□□□ 0.44
SCAMP4-211ENST00000588907 KRT3P12035 628 aa17.79■□□□□ 0.44
SCAMP4-211ENST00000588907 DDX6P26196 483 aaKnown RBP eCLIP17.79■□□□□ 0.44
SCAMP4-211ENST00000588907 GTF2F1P35269 517 aaKnown RBP eCLIP17.79■□□□□ 0.44
SCAMP4-211ENST00000588907 USP46P62068 366 aa17.79■□□□□ 0.44
SCAMP4-211ENST00000588907 YWHAZP63104 245 aaKnown RBP17.79■□□□□ 0.44
SCAMP4-211ENST00000588907 MTMR3Q13615 1198 aa17.79■□□□□ 0.44
SCAMP4-211ENST00000588907 TCEAL1Q15170 157 aa17.79■□□□□ 0.44
SCAMP4-211ENST00000588907 IFI16Q16666 785 aaKnown RBP17.79■□□□□ 0.44
SCAMP4-211ENST00000588907 DCUN1D2Q6PH85 259 aa17.79■□□□□ 0.44
SCAMP4-211ENST00000588907 MICALL1Q8N3F8 863 aa17.79■□□□□ 0.44
SCAMP4-211ENST00000588907 ACRBPQ8NEB7 543 aa17.79■□□□□ 0.44
SCAMP4-211ENST00000588907 MYLIPQ8WY64 445 aa17.79■□□□□ 0.44
SCAMP4-211ENST00000588907 FAM149B1Q96BN6 582 aa17.79■□□□□ 0.44
SCAMP4-211ENST00000588907 ZNF707Q96C28 371 aaPredicted RBP17.79■□□□□ 0.44
SCAMP4-211ENST00000588907 GUCD1Q96NT3 240 aa17.79■□□□□ 0.44
SCAMP4-211ENST00000588907 CORO1BQ9BR76 489 aa17.79■□□□□ 0.44
SCAMP4-211ENST00000588907 OLA1Q9NTK5 396 aaKnown RBP17.79■□□□□ 0.44
SCAMP4-211ENST00000588907 MTMR10Q9NXD2 777 aa17.79■□□□□ 0.44
SCAMP4-211ENST00000588907 GOLGA6L9A6NEM1 432 aa17.78■□□□□ 0.44
SCAMP4-211ENST00000588907 PIK3R2O00459 728 aa17.78■□□□□ 0.44
SCAMP4-211ENST00000588907 PJA2O43164 708 aa17.78■□□□□ 0.44
SCAMP4-211ENST00000588907 KRT86O43790 486 aa17.78■□□□□ 0.44
SCAMP4-211ENST00000588907 DAB1O75553 588 aa17.78■□□□□ 0.44
SCAMP4-211ENST00000588907 GABBR2O75899 941 aa17.78■□□□□ 0.44
SCAMP4-211ENST00000588907 ZDHHC11BP0C7U3 371 aa17.78■□□□□ 0.44
SCAMP4-211ENST00000588907 YWHAGP61981 247 aaKnown RBP eCLIP17.78■□□□□ 0.44
SCAMP4-211ENST00000588907 MAMLD1Q13495 774 aa17.78■□□□□ 0.44
SCAMP4-211ENST00000588907 Q7L0L9 218 aa17.78■□□□□ 0.44
SCAMP4-211ENST00000588907 GPR149Q86SP6 731 aa17.78■□□□□ 0.44
SCAMP4-211ENST00000588907 TMC8Q8IU68 726 aa17.78■□□□□ 0.44
SCAMP4-211ENST00000588907 FNIP1Q8TF40 1166 aa17.78■□□□□ 0.44
SCAMP4-211ENST00000588907 RIPOR3Q96MK2 946 aa17.78■□□□□ 0.44
SCAMP4-211ENST00000588907 ZNF830Q96NB3 372 aaPredicted RBP17.78■□□□□ 0.44
SCAMP4-211ENST00000588907 DESI2Q9BSY9 194 aa17.78■□□□□ 0.44
SCAMP4-211ENST00000588907 ADAM7Q9H2U9 754 aa17.78■□□□□ 0.44
SCAMP4-211ENST00000588907 GMIPQ9P107 970 aa17.78■□□□□ 0.44
SCAMP4-211ENST00000588907 TJP2Q9UDY2 1190 aa17.78■□□□□ 0.44
SCAMP4-211ENST00000588907 STAP1Q9ULZ2 295 aa17.78■□□□□ 0.44
SCAMP4-211ENST00000588907 REXO2Q9Y3B8 237 aaKnown RBP17.78■□□□□ 0.44
SCAMP4-211ENST00000588907 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.78■□□□□ 0.44
SCAMP4-211ENST00000588907 TCRBV5S1A1TA0A578 114 aa17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 YJEFN3A6XGL0 299 aa17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 E7ENQ6 273 aa17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 GOLGA8SH3BPF8 625 aa17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 CAPN9O14815 690 aa17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 LINC01565O15544 149 aa17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 MTA2O94776 668 aa17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 RHOP08100 348 aa17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 ARHGAP15Q53QZ3 475 aa17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 C2CD6Q53TS8 623 aa17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 RARS2Q5T160 578 aaKnown RBP17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 BSPRYQ5W0U4 402 aa17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 BTBD8Q5XKL5 378 aa17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 KLHDC10Q6PID8 442 aa17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 TMC5Q6UXY8 1006 aa17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 RNF139Q8WU17 664 aa17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 MRPS31Q92665 395 aaKnown RBP17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 NECTIN4Q96NY8 510 aa17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 SLC2A13Q96QE2 648 aa17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 NCAPGQ9BPX3 1015 aa17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 NUP85Q9BW27 656 aa17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 PACSIN1Q9BY11 444 aa17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 METTL5Q9NRN9 209 aaKnown RBP17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 CTTNBP2NLQ9P2B4 639 aa17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 MYO1AQ9UBC5 1043 aa17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 PPP2R2CQ9Y2T4 447 aa17.77■□□□□ 0.44
SCAMP4-211ENST00000588907 SZT2Q5T011 3432 aa17.77■□□□□ 0.43
SCAMP4-211ENST00000588907 ZNF840PA6NDX5 716 aa17.76■□□□□ 0.43
SCAMP4-211ENST00000588907 TBX10O75333 385 aa17.76■□□□□ 0.43
SCAMP4-211ENST00000588907 GABRR2P28476 465 aa17.76■□□□□ 0.43
SCAMP4-211ENST00000588907 NOS2P35228 1153 aa17.76■□□□□ 0.43
SCAMP4-211ENST00000588907 MATKP42679 507 aa17.76■□□□□ 0.43
SCAMP4-211ENST00000588907 MTHFRP42898 656 aa17.76■□□□□ 0.43
SCAMP4-211ENST00000588907 HADHBP55084 474 aaKnown RBP17.76■□□□□ 0.43
SCAMP4-211ENST00000588907 RBM10P98175 930 aaKnown RBP17.76■□□□□ 0.43
SCAMP4-211ENST00000588907 ARHGAP29Q52LW3 1261 aa17.76■□□□□ 0.43
SCAMP4-211ENST00000588907 ATAT1Q5SQI0 421 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms