RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 SIX2Q9NPC8 291 aa10.64□□□□□ -0.71
TPM4-207ENST00000588032 DUS2Q9NX74 493 aaKnown RBP10.64□□□□□ -0.71
TPM4-207ENST00000588032 TBC1D14Q9P2M4 693 aa10.64□□□□□ -0.71
TPM4-207ENST00000588032 DNAJC12Q9UKB3 198 aa10.64□□□□□ -0.71
TPM4-207ENST00000588032 DAAM1Q9Y4D1 1078 aa10.64□□□□□ -0.71
TPM4-207ENST00000588032 CPQQ9Y646 472 aa10.64□□□□□ -0.71
TPM4-207ENST00000588032 GREB1Q4ZG55 1949 aa10.64□□□□□ -0.71
TPM4-207ENST00000588032 NUP210Q8TEM1 1887 aaPredicted RBP10.64□□□□□ -0.71
TPM4-207ENST00000588032 E2F8A0AVK6 867 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 CYP26A1O43174 497 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 GALR2O43603 387 aaPredicted RBP10.63□□□□□ -0.71
TPM4-207ENST00000588032 PI15O43692 258 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 CAVIN2O95810 425 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 ZBED1O96006 694 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 BRD2P25440 801 aaKnown RBP10.63□□□□□ -0.71
TPM4-207ENST00000588032 USP8P40818 1118 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 IFNAR2P48551 515 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 BPIFB4P59827 614 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 PTK2Q05397 1052 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 KCNMA1Q12791 1236 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 UBXN2BQ14CS0 331 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 KRT31Q15323 416 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 ARHGAP44Q17R89 818 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 ANO6Q4KMQ2 910 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 IER5LQ5T953 404 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 KLHDC7AQ5VTJ3 777 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 SIX6OS1Q8N1H7 587 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 CPA6Q8N4T0 437 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 STK32AQ8WU08 396 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 ZNF606Q8WXB4 792 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 CLDN23Q96B33 292 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 OTUB2Q96DC9 234 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 ZFYVE19Q96K21 471 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 ZSWIM1Q9BR11 485 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 VPS16Q9H269 839 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 CCSER2Q9H7U1 834 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 PLCB1Q9NQ66 1216 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 CNGB3Q9NQW8 809 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.63□□□□□ -0.71
TPM4-207ENST00000588032 TAB2Q9NYJ8 693 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 GTSE1Q9NYZ3 720 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 LIMA1Q9UHB6 759 aaKnown RBP10.63□□□□□ -0.71
TPM4-207ENST00000588032 DNMT3LQ9UJW3 386 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 NAGPAQ9UK23 515 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 C5orf42Q9H799 3197 aa10.63□□□□□ -0.71
TPM4-207ENST00000588032 DENND4CQ5VZ89 1909 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 A0A1W2PQH9 124 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 BECN2A8MW95 431 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 SPECC1L-ADORA2AF8WAN1 911 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 M0QYV0 167 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 THAP12O43422 761 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 FBXO21O94952 628 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 NFATC1O95644 943 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 RARGP13631 454 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 ZNF18P17022 549 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 GNA15P30679 374 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 CTHP32929 405 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 ACADSBP45954 432 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 RPS9P46781 194 aaKnown RBP10.62□□□□□ -0.71
TPM4-207ENST00000588032 ZNF165P49910 485 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 COPB1P53618 953 aaKnown RBP10.62□□□□□ -0.71
TPM4-207ENST00000588032 YWHAGP61981 247 aaKnown RBP eCLIP10.62□□□□□ -0.71
TPM4-207ENST00000588032 COG7P83436 770 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 ZXDBP98169 803 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 TNK2Q07912 1038 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 NCAPHQ15003 741 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 GJB7Q6PEY0 223 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 SCD5Q86SK9 330 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 CCDC105Q8IYK2 499 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 ADGRG2Q8IZP9 1017 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 DTWD2Q8NBA8 298 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 IRGQQ8WZA9 623 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 SECISBP2LQ93073 1101 aaKnown RBP10.62□□□□□ -0.71
TPM4-207ENST00000588032 IER2Q9BTL4 223 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 KLF16Q9BXK1 252 aaPredicted RBP10.62□□□□□ -0.71
TPM4-207ENST00000588032 FOXQ1Q9C009 403 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 EBF3Q9H4W6 596 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 ECT2Q9H8V3 914 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 HPS4Q9NQG7 708 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 OLA1Q9NTK5 396 aaKnown RBP10.62□□□□□ -0.71
TPM4-207ENST00000588032 OSER1Q9NX31 292 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 SMPD4Q9NXE4 827 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 CFAP97Q9P2B7 532 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 SH3BP1Q9Y3L3 701 aa10.62□□□□□ -0.71
TPM4-207ENST00000588032 OBSL1O75147 1896 aa10.61□□□□□ -0.71
TPM4-207ENST00000588032 SHISA7A6NL88 538 aa10.61□□□□□ -0.71
TPM4-207ENST00000588032 TULP2O00295 520 aa10.61□□□□□ -0.71
TPM4-207ENST00000588032 FOXN3O00409 490 aaPredicted RBP10.61□□□□□ -0.71
TPM4-207ENST00000588032 TRDMT1O14717 391 aaKnown RBP10.61□□□□□ -0.71
TPM4-207ENST00000588032 SART1O43290 800 aaKnown RBP10.61□□□□□ -0.71
TPM4-207ENST00000588032 UCHL3P15374 230 aa10.61□□□□□ -0.71
TPM4-207ENST00000588032 CD72P21854 359 aa10.61□□□□□ -0.71
TPM4-207ENST00000588032 TARSP26639 723 aaKnown RBP10.61□□□□□ -0.71
TPM4-207ENST00000588032 GPD2P43304 727 aa10.61□□□□□ -0.71
TPM4-207ENST00000588032 RPL34P49207 117 aaKnown RBP10.61□□□□□ -0.71
TPM4-207ENST00000588032 PGFP49763 221 aa10.61□□□□□ -0.71
TPM4-207ENST00000588032 PTPN5P54829 565 aa10.61□□□□□ -0.71
TPM4-207ENST00000588032 SNX16P57768 344 aa10.61□□□□□ -0.71
TPM4-207ENST00000588032 APBA1Q02410 837 aa10.61□□□□□ -0.71
TPM4-207ENST00000588032 ADIGQ0VDE8 80 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms