RNA–Protein interactions for RNA: ENST00000587697.1

TNFRSF11A-203, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 3

Gene TNFRSF11A, Length 528 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-203ENST00000587697 IL1R2P27930 398 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 MIPP30301 263 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 NOS2P35228 1153 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 PAFAH1B1P43034 410 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 MAGEA10P43363 369 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 GPR15P49685 360 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CREMQ03060 361 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 KRT17Q04695 432 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RAB33AQ14088 237 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RAB6CQ53S08 254 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 C9orf50Q5SZB4 431 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SH3PXD2AQ5TCZ1 1133 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 TPGS2Q68CL5 300 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 TXNRD3NBQ6F5E7 133 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 BEND5Q7L4P6 421 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 STRADAQ7RTN6 431 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CTAGE6Q86UF2 777 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CTAGE4Q8IX94 777 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 NUP93Q8N1F7 819 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 KLHL23Q8NBE8 558 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 EXD1Q8NHP7 514 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SCAMP5Q8TAC9 235 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 FAM172AQ8WUF8 416 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SPATA17Q96L03 361 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CEP295NLQ96MC4 621 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 PEBP4Q96S96 227 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 NPY6RQ99463 290 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 NCAPGQ9BPX3 1015 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RAB6CQ9H0N0 254 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 POPDC2Q9HBU9 364 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RXFP1Q9HBX9 757 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 COMMD8Q9NX08 183 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 FNIP2Q9P278 1114 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 AFF4Q9UHB7 1163 aaKnown RBP12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 LZTS1Q9Y250 596 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RWDD3Q9Y3V2 267 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 NR2E3Q9Y5X4 410 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 DOCK4Q8N1I0 1966 aa12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CCDC85CA6NKD9 419 aa12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 C2CD2LO14523 706 aa12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 TRUB2O95900 331 aaKnown RBP12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 KRT7P08729 469 aa12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 TFE3P19532 575 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 PTPN7P35236 360 aa12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 BMPR1AP36894 532 aa12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SSR1P43307 286 aaKnown RBP12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 HDAC4P56524 1084 aa12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RPL10AP62906 217 aaKnown RBP12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CLUL1Q15846 466 aa12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 DDR2Q16832 855 aa12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SLC25A52Q3SY17 297 aa12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SEL1L2Q5TEA6 688 aa12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 AADACL2Q6P093 401 aa12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SPATA4Q8NEY3 305 aa12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 ZNF461Q8TAF7 563 aa12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 FAM149B1Q96BN6 582 aa12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 TBCBQ99426 244 aa12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 TRIM62Q9BVG3 475 aa12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 PLVAPQ9BX97 442 aa12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 NGRNQ9NPE2 291 aaKnown RBP12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 DDX56Q9NY93 547 aaKnown RBP12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 STAP1Q9ULZ2 295 aa12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 USP18Q9UMW8 372 aa12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SCML2Q9UQR0 700 aa12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SSX2IPQ9Y2D8 614 aa12.47□□□□□ -0.41
TNFRSF11A-203ENST00000587697 C5orf67F2Z3F1 127 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 ARHGEF15O94989 841 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RTN3O95197 1032 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 FGGP02679 453 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 KRT1P04264 644 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 ATF2P15336 505 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 DESP17661 470 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 ATF6P18850 670 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CTNNB1P35222 781 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 GJC1P36383 396 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SULT1E1P49888 294 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 USP46P62068 366 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 PITX1P78337 314 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 ATP11AP98196 1134 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 DUSP4Q13115 394 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SHHQ15465 462 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 TAZQ16635 292 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 HADHQ16836 314 aaKnown RBP12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CDO1Q16878 200 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 MGAT5BQ3V5L5 792 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 ATP13A4Q4VNC1 1196 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 DCAF6Q58WW2 860 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SDHAF4Q5VUM1 108 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SYPL2Q5VXT5 272 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SCD5Q86SK9 330 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SLC13A5Q86YT5 568 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RCOR2Q8IZ40 523 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 MMGT1Q8N4V1 131 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 NOA1Q8NC60 698 aaKnown RBP12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 TEKT4Q8WW24 435 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 AUTS2Q8WXX7 1259 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 GOLGA1Q92805 767 aa12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 PGAP3Q96FM1 320 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RBM41Q96IZ5 413 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms