RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 TTC30AQ86WT1 665 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 ARHGEF19Q8IW93 802 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 MAML2Q8IZL2 1156 aaPredicted RBP9.11□□□□□ -0.95
ATG4D-202ENST00000585437 ZNF276Q8N554 614 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 ANKRD52Q8NB46 1076 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 EHBP1Q8NDI1 1231 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 SH3RF2Q8TEC5 729 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 OSCP1Q8WVF1 389 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 FAM3CQ92520 227 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 KAT5Q92993 513 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 JAKMIP2Q96AA8 810 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 FAM122AQ96E09 287 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 KREMEN1Q96MU8 473 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 IER2Q9BTL4 223 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 UBXN6Q9BZV1 441 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 IRF2BPLQ9H1B7 796 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 CHRDQ9H2X0 955 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 THAP9Q9H5L6 903 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 GKN1Q9NS71 199 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 THG1LQ9NWX6 298 aaKnown RBP9.11□□□□□ -0.95
ATG4D-202ENST00000585437 GMIPQ9P107 970 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 TSPAN16Q9UKR8 245 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 SCML2Q9UQR0 700 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 MRPS17Q9Y2R5 130 aaKnown RBP9.11□□□□□ -0.95
ATG4D-202ENST00000585437 CPQQ9Y646 472 aa9.11□□□□□ -0.95
ATG4D-202ENST00000585437 FRYLO94915 3013 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 MUC22E2RYF6 1773 aaPredicted RBP9.1□□□□□ -0.95
ATG4D-202ENST00000585437 ATG2BQ96BY7 2078 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 FAM170BA6NMN3 283 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 PROB1E7EW31 1015 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 LEFTY2O00292 366 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 NCAM2O15394 837 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 CYP26A1O43174 497 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 SERPINC1P01008 464 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 CHRNB1P11230 501 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 VDRP11473 427 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 ARSAP15289 507 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 HOXD11P31277 338 aaPredicted RBP9.1□□□□□ -0.95
ATG4D-202ENST00000585437 NBL1P41271 181 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 TERF1P54274 439 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 BCAT1P54687 386 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 FANCCQ00597 558 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 CETN1Q12798 172 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 IFRD2Q12894 506 aaPredicted RBP9.1□□□□□ -0.95
ATG4D-202ENST00000585437 LRMPQ12912 555 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 ANGPT1Q15389 498 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 MAN2A1Q16706 1144 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 GAB4Q2WGN9 574 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 SGO2Q562F6 1265 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 MIIPQ5JXC2 388 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 HECTD3Q5T447 861 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 TRIM68Q6AZZ1 485 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 KLHDC10Q6PID8 442 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 TRIM65Q6PJ69 517 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 BHLHA9Q7RTU4 235 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 PIGZQ86VD9 579 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 DDX42Q86XP3 938 aaKnown RBP eCLIP9.1□□□□□ -0.95
ATG4D-202ENST00000585437 PPM1KQ8N3J5 372 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 NELL1Q92832 810 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 HEXIM2Q96MH2 286 aaKnown RBP9.1□□□□□ -0.95
ATG4D-202ENST00000585437 ZSWIM1Q9BR11 485 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 INTS2Q9H0H0 1204 aaKnown RBP9.1□□□□□ -0.95
ATG4D-202ENST00000585437 EBF3Q9H4W6 596 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 CCSER2Q9H7U1 834 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 NMUR1Q9HB89 426 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 PRMT8Q9NR22 394 aaPredicted RBP9.1□□□□□ -0.95
ATG4D-202ENST00000585437 TLR8Q9NR97 1041 aaKnown RBP9.1□□□□□ -0.95
ATG4D-202ENST00000585437 SPTLC3Q9NUV7 552 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 OSER1Q9NX31 292 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 IFNKQ9P0W0 207 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 KIAA1257Q9ULG3 409 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 WNT6Q9Y6F9 365 aa9.1□□□□□ -0.95
ATG4D-202ENST00000585437 E2F8A0AVK6 867 aa9.09□□□□□ -0.95
ATG4D-202ENST00000585437 H0Y858 1186 aa9.09□□□□□ -0.95
ATG4D-202ENST00000585437 RNF225M0QZC1 329 aaPredicted RBP9.09□□□□□ -0.95
ATG4D-202ENST00000585437 STK25O00506 426 aa9.09□□□□□ -0.95
ATG4D-202ENST00000585437 TRDMT1O14717 391 aaKnown RBP9.09□□□□□ -0.95
ATG4D-202ENST00000585437 XPO1O14980 1071 aaKnown RBP9.09□□□□□ -0.95
ATG4D-202ENST00000585437 GREM1O60565 184 aa9.09□□□□□ -0.95
ATG4D-202ENST00000585437 TLR5O60602 858 aa9.09□□□□□ -0.95
ATG4D-202ENST00000585437 SETSIPP0DME0 302 aa9.09□□□□□ -0.95
ATG4D-202ENST00000585437 TDGF1P13385 188 aa9.09□□□□□ -0.95
ATG4D-202ENST00000585437 CDK11BP21127 795 aaKnown RBP9.09□□□□□ -0.95
ATG4D-202ENST00000585437 GJA4P35212 333 aa9.09□□□□□ -0.95
ATG4D-202ENST00000585437 PLA2G4AP47712 749 aa9.09□□□□□ -0.95
ATG4D-202ENST00000585437 PSEN1P49768 467 aa9.09□□□□□ -0.95
ATG4D-202ENST00000585437 KPNA1P52294 538 aaPredicted RBP9.09□□□□□ -0.95
ATG4D-202ENST00000585437 UBASH3AP57075 661 aa9.09□□□□□ -0.95
ATG4D-202ENST00000585437 PDE4CQ08493 712 aa9.09□□□□□ -0.95
ATG4D-202ENST00000585437 BST2Q10589 180 aaKnown RBP9.09□□□□□ -0.95
ATG4D-202ENST00000585437 GAS6Q14393 721 aa9.09□□□□□ -0.95
ATG4D-202ENST00000585437 STILQ15468 1287 aa9.09□□□□□ -0.95
ATG4D-202ENST00000585437 MEA1Q16626 185 aa9.09□□□□□ -0.95
ATG4D-202ENST00000585437 GOLGA7BQ2TAP0 167 aa9.09□□□□□ -0.95
ATG4D-202ENST00000585437 ZNF528Q3MIS6 628 aa9.09□□□□□ -0.95
ATG4D-202ENST00000585437 TMEM196Q5HYL7 178 aa9.09□□□□□ -0.95
ATG4D-202ENST00000585437 CDKAL1Q5VV42 579 aa9.09□□□□□ -0.95
ATG4D-202ENST00000585437 DPY19L2P1Q6NXN4 242 aa9.09□□□□□ -0.95
ATG4D-202ENST00000585437 CC2D1AQ6P1N0 951 aaPredicted RBP9.09□□□□□ -0.95
ATG4D-202ENST00000585437 TMEM270Q6UE05 265 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms