RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 CYP4A22Q5TCH4 519 aa13.56□□□□□ -0.24
TRIM47-202ENST00000585333 BTBD8Q5XKL5 378 aa13.56□□□□□ -0.24
TRIM47-202ENST00000585333 FAM183BPQ6ZVS7 135 aa13.56□□□□□ -0.24
TRIM47-202ENST00000585333 SPRED2Q7Z698 418 aa13.56□□□□□ -0.24
TRIM47-202ENST00000585333 DNAJB7Q7Z6W7 309 aaPredicted RBP13.56□□□□□ -0.24
TRIM47-202ENST00000585333 SCUBE3Q8IX30 993 aa13.56□□□□□ -0.24
TRIM47-202ENST00000585333 CCAR2Q8N163 923 aaKnown RBP13.56□□□□□ -0.24
TRIM47-202ENST00000585333 SLC35G2Q8TBE7 412 aa13.56□□□□□ -0.24
TRIM47-202ENST00000585333 PRKD2Q9BZL6 878 aa13.56□□□□□ -0.24
TRIM47-202ENST00000585333 COL4A4P53420 1690 aaPredicted RBP13.56□□□□□ -0.24
TRIM47-202ENST00000585333 PATJQ8NI35 1801 aa13.55□□□□□ -0.24
TRIM47-202ENST00000585333 EPOPA6NHQ4 379 aa13.55□□□□□ -0.24
TRIM47-202ENST00000585333 GOLGA8SH3BPF8 625 aa13.55□□□□□ -0.24
TRIM47-202ENST00000585333 TULP2O00295 520 aa13.55□□□□□ -0.24
TRIM47-202ENST00000585333 RNF8O76064 485 aa13.55□□□□□ -0.24
TRIM47-202ENST00000585333 CSPG5O95196 566 aa13.55□□□□□ -0.24
TRIM47-202ENST00000585333 PAPLNO95428 1278 aa13.55□□□□□ -0.24
TRIM47-202ENST00000585333 USP17L7P0C7H9 530 aa13.55□□□□□ -0.24
TRIM47-202ENST00000585333 MAN1A1P33908 653 aa13.55□□□□□ -0.24
TRIM47-202ENST00000585333 NOS2P35228 1153 aa13.55□□□□□ -0.24
TRIM47-202ENST00000585333 MATKP42679 507 aa13.55□□□□□ -0.24
TRIM47-202ENST00000585333 CACNA2D1P54289 1103 aa13.55□□□□□ -0.24
TRIM47-202ENST00000585333 YWHAGP61981 247 aaKnown RBP eCLIP13.55□□□□□ -0.24
TRIM47-202ENST00000585333 ITIH3Q06033 890 aa13.55□□□□□ -0.24
TRIM47-202ENST00000585333 ARHGAP15Q53QZ3 475 aa13.55□□□□□ -0.24
TRIM47-202ENST00000585333 ACBD5Q5T8D3 534 aaPredicted RBP13.55□□□□□ -0.24
TRIM47-202ENST00000585333 SNX30Q5VWJ9 437 aa13.55□□□□□ -0.24
TRIM47-202ENST00000585333 C11orf63Q6NUN7 778 aa13.55□□□□□ -0.24
TRIM47-202ENST00000585333 SND1Q7KZF4 910 aaKnown RBP eCLIP13.55□□□□□ -0.24
TRIM47-202ENST00000585333 RSRC2Q7L4I2 434 aaKnown RBP13.55□□□□□ -0.24
TRIM47-202ENST00000585333 RBM23Q86U06 439 aaKnown RBP13.55□□□□□ -0.24
TRIM47-202ENST00000585333 TTC9BQ8N6N2 239 aa13.55□□□□□ -0.24
TRIM47-202ENST00000585333 MRPS31Q92665 395 aaKnown RBP13.55□□□□□ -0.24
TRIM47-202ENST00000585333 CNPY3Q9BT09 278 aa13.55□□□□□ -0.24
TRIM47-202ENST00000585333 PRDM12Q9H4Q4 367 aa13.55□□□□□ -0.24
TRIM47-202ENST00000585333 PIDD1Q9HB75 910 aa13.55□□□□□ -0.24
TRIM47-202ENST00000585333 METTL5Q9NRN9 209 aaKnown RBP13.55□□□□□ -0.24
TRIM47-202ENST00000585333 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.55□□□□□ -0.24
TRIM47-202ENST00000585333 ANAPC7Q9UJX3 599 aa13.55□□□□□ -0.24
TRIM47-202ENST00000585333 GUCA1BQ9UMX6 200 aa13.55□□□□□ -0.24
TRIM47-202ENST00000585333 MAGED2Q9UNF1 606 aaPredicted RBP13.55□□□□□ -0.24
TRIM47-202ENST00000585333 REXO2Q9Y3B8 237 aaKnown RBP13.55□□□□□ -0.24
TRIM47-202ENST00000585333 DPYSL4O14531 572 aa13.54□□□□□ -0.24
TRIM47-202ENST00000585333 PDGFRAP16234 1089 aa13.54□□□□□ -0.24
TRIM47-202ENST00000585333 EPCAMP16422 314 aa13.54□□□□□ -0.24
TRIM47-202ENST00000585333 GPD1P21695 349 aa13.54□□□□□ -0.24
TRIM47-202ENST00000585333 PTPN9P43378 593 aa13.54□□□□□ -0.24
TRIM47-202ENST00000585333 ZNF143P52747 638 aaPredicted RBP13.54□□□□□ -0.24
TRIM47-202ENST00000585333 IFRD2Q12894 506 aaPredicted RBP13.54□□□□□ -0.24
TRIM47-202ENST00000585333 TAF10Q12962 218 aa13.54□□□□□ -0.24
TRIM47-202ENST00000585333 NNTQ13423 1086 aa13.54□□□□□ -0.24
TRIM47-202ENST00000585333 TCEAL5Q5H9L2 206 aa13.54□□□□□ -0.24
TRIM47-202ENST00000585333 BSPRYQ5W0U4 402 aa13.54□□□□□ -0.24
TRIM47-202ENST00000585333 CES5AQ6NT32 575 aa13.54□□□□□ -0.24
TRIM47-202ENST00000585333 KLHDC10Q6PID8 442 aa13.54□□□□□ -0.24
TRIM47-202ENST00000585333 PDZD4Q76G19 769 aaPredicted RBP13.54□□□□□ -0.24
TRIM47-202ENST00000585333 NIPA2Q8N8Q9 360 aa13.54□□□□□ -0.24
TRIM47-202ENST00000585333 GIPC2Q8TF65 315 aa13.54□□□□□ -0.24
TRIM47-202ENST00000585333 MCEEQ96PE7 176 aa13.54□□□□□ -0.24
TRIM47-202ENST00000585333 PACSIN1Q9BY11 444 aa13.54□□□□□ -0.24
TRIM47-202ENST00000585333 NACA2Q9H009 215 aa13.54□□□□□ -0.24
TRIM47-202ENST00000585333 CRISPLD1Q9H336 500 aa13.54□□□□□ -0.24
TRIM47-202ENST00000585333 LZTFL1Q9NQ48 299 aa13.54□□□□□ -0.24
TRIM47-202ENST00000585333 TMEM30AQ9NV96 361 aa13.54□□□□□ -0.24
TRIM47-202ENST00000585333 PYCARDQ9ULZ3 195 aa13.54□□□□□ -0.24
TRIM47-202ENST00000585333 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.54□□□□□ -0.24
TRIM47-202ENST00000585333 TCRBV5S1A1TA0A578 114 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 MACROD2A1Z1Q3 448 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 TMEM191CA6NGB0 347 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 PER2O15055 1255 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 SPATA31D3P0C874 917 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 SLC2A3P11169 496 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 NCAM1P13591 858 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 IGFBP4P22692 258 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 GPR15P49685 360 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 EPHA5P54756 1037 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 AIF1P55008 147 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 GRIN2CQ14957 1233 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 HADHQ16836 314 aaKnown RBP13.53□□□□□ -0.24
TRIM47-202ENST00000585333 SLC25A52Q3SY17 297 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 PPP1R15BQ5SWA1 713 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 SPATA31D4Q6ZUB0 917 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 STRADAQ7RTN6 431 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 GPRIN1Q7Z2K8 1008 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 ADGRD2Q7Z7M1 963 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 VN1R2Q8NFZ6 395 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 SCAMP5Q8TAC9 235 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 RIPOR3Q96MK2 946 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 SERPINB11Q96P15 392 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 SLC2A13Q96QE2 648 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 TTYH1Q9H313 450 aaPredicted RBP13.53□□□□□ -0.24
TRIM47-202ENST00000585333 TMEM59LQ9UK28 342 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 PCDHGC5Q9Y5F6 944 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 MTCH2Q9Y6C9 303 aa13.53□□□□□ -0.24
TRIM47-202ENST00000585333 MTCL1Q9Y4B5 1905 aaKnown RBP13.52□□□□□ -0.24
TRIM47-202ENST00000585333 CCDC195A0A1B0GUA6 201 aa13.52□□□□□ -0.25
TRIM47-202ENST00000585333 C2CD4BA6NLJ0 364 aa13.52□□□□□ -0.25
TRIM47-202ENST00000585333 YJEFN3A6XGL0 299 aa13.52□□□□□ -0.25
TRIM47-202ENST00000585333 MIF4GDA9UHW6 222 aaKnown RBP13.52□□□□□ -0.25
TRIM47-202ENST00000585333 E7ENQ6 273 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms