RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 RNF38Q9H0F5 515 aa11.4□□□□□ -0.58
CSNK1D-226ENST00000585026 DEC1Q9P2X7 70 aa11.4□□□□□ -0.58
CSNK1D-226ENST00000585026 SLC6A14Q9UN76 642 aa11.4□□□□□ -0.58
CSNK1D-226ENST00000585026 WASF3Q9UPY6 502 aa11.4□□□□□ -0.58
CSNK1D-226ENST00000585026 SH3BP1Q9Y3L3 701 aa11.4□□□□□ -0.58
CSNK1D-226ENST00000585026 CHD6Q8TD26 2715 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 FRMD3A2A2Y4 597 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 OPHN1O60890 802 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 ZNF217O75362 1048 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 CFIP05156 583 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 PTPN1P18031 435 aaKnown RBP11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 SPINK2P20155 84 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 KIR2DL1P43626 348 aaPredicted RBP11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 SLC6A11P48066 632 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 SIM1P81133 766 aaPredicted RBP11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 ZXDBP98169 803 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 AMPD3Q01432 767 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 TYRO3Q06418 890 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 TRPC3Q13507 836 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 GAB4Q2WGN9 574 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 WDR72Q3MJ13 1102 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 LY6G5CQ5SRR4 150 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 CNNM4Q6P4Q7 775 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 ARMCX6Q7L4S7 300 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 TRAPPC11Q7Z392 1133 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 CEP57L1Q8IYX8 460 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 NUP93Q8N1F7 819 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 PDILTQ8N807 584 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 OR5B17Q8NGF7 314 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 ZCCHC14Q8WYQ9 949 aaKnown RBP11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 GATA6Q92908 595 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 FBXO32Q969P5 355 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 DHX58Q96C10 678 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 PANK2Q9BZ23 570 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 NACA2Q9H009 215 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 KBTBD4Q9NVX7 518 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 HSPBP1Q9NZL4 362 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 MSRB2Q9Y3D2 182 aa11.39□□□□□ -0.59
CSNK1D-226ENST00000585026 ABCA7Q8IZY2 2146 aa11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 A8MXQ7 604 aa11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 HOXC11O43248 304 aaPredicted RBP11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 SYPP08247 313 aa11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 SERPINF2P08697 491 aa11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 DLATP10515 647 aaKnown RBP11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 TRIM21P19474 475 aaKnown RBP11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 PTGER3P43115 390 aa11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 TUBP50607 506 aa11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 SNRPFP62306 86 aaKnown RBP11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 RPL6Q02878 288 aaKnown RBP11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 KDSRQ06136 332 aa11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 IFRD2Q12894 506 aaPredicted RBP11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 SEMA3BQ13214 749 aa11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 ZNF423Q2M1K9 1284 aa11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 MAP7D1Q3KQU3 841 aa11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 HECTD3Q5T447 861 aa11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 EMC10Q5UCC4 262 aa11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 CBWD2Q8IUF1 395 aa11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 ZNF513Q8N8E2 541 aaPredicted RBP11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 TRIML1Q8N9V2 468 aa11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 GSDMAQ96QA5 445 aa11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 DUSP9Q99956 384 aaKnown RBP11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 GTPBP2Q9BX10 602 aaKnown RBP11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 TMEM121BQ9BXQ6 578 aaPredicted RBP11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 COMMD8Q9NX08 183 aa11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 PILRBQ9UKJ0 227 aa11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 PCDHA5Q9Y5H7 936 aa11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 DENND4CQ5VZ89 1909 aa11.38□□□□□ -0.59
CSNK1D-226ENST00000585026 SRRM3A6NNA2 597 aaPredicted RBP11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 EIF3DO15371 548 aaKnown RBP eCLIP11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 PHACTR2O75167 634 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 CLSTN1O94985 981 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 SMC2O95347 1197 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 STAU1O95793 577 aaKnown RBP11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 HNRNPLP14866 589 aaKnown RBP eCLIP11.37□□□□□ -0.592e-7■■■■■ 32.8
CSNK1D-226ENST00000585026 ITPKAP23677 461 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 NTSR1P30989 418 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 ATICP31939 592 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 GOLGA8FQ08AF8 430 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 GOLGA8DPQ0D2H9 430 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 DPYDQ12882 1025 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 SNRNP35Q16560 246 aaKnown RBP11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 STX1AQ16623 288 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 ANO4Q32M45 955 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 CT47A1Q5JQC4 288 aaPredicted RBP11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 C10orf76Q5T2E6 689 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 PEAR1Q5VY43 1037 aaPredicted RBP11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 SCARA3Q6AZY7 606 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 KIAA1211LQ6NV74 962 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 PIP4P1Q86T03 277 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 C12orf40Q86WS4 652 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 B3GALNT2Q8NCR0 500 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 FAM84AQ96KN4 292 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 TNIP3Q96KP6 325 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 XPO6Q96QU8 1125 aaKnown RBP11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 MRPL45Q9BRJ2 306 aaKnown RBP11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 RBSNQ9H1K0 784 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 FAM124BQ9H5Z6 455 aaPredicted RBP11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 SPHK2Q9NRA0 654 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 TMEM74BQ9NUR3 256 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 ANO10Q9NW15 660 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms