RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 A0A1W2PQH9 124 aa21.52■■□□□ 1.04
SS18-224ENST00000584083 E2F8A0AVK6 867 aa21.52■■□□□ 1.04
SS18-224ENST00000584083 IRF1P10914 325 aa21.52■■□□□ 1.04
SS18-224ENST00000584083 VDRP11473 427 aa21.52■■□□□ 1.04
SS18-224ENST00000584083 SATB1Q01826 763 aa21.52■■□□□ 1.04
SS18-224ENST00000584083 TPD52L1Q16890 204 aaPredicted RBP21.52■■□□□ 1.04
SS18-224ENST00000584083 NAIF1Q69YI7 327 aaPredicted RBP21.52■■□□□ 1.04
SS18-224ENST00000584083 TMEM270Q6UE05 265 aa21.52■■□□□ 1.04
SS18-224ENST00000584083 LMO3Q8TAP4 145 aa21.52■■□□□ 1.04
SS18-224ENST00000584083 CD101Q93033 1021 aa21.52■■□□□ 1.04
SS18-224ENST00000584083 ZFRQ96KR1 1074 aaKnown RBP21.52■■□□□ 1.04
SS18-224ENST00000584083 CNOT6LQ96LI5 555 aaKnown RBP21.52■■□□□ 1.04
SS18-224ENST00000584083 GBP4Q96PP9 640 aa21.52■■□□□ 1.04
SS18-224ENST00000584083 NMUR1Q9HB89 426 aa21.52■■□□□ 1.04
SS18-224ENST00000584083 FBRSL1Q9HCM7 1045 aaKnown RBP21.52■■□□□ 1.04
SS18-224ENST00000584083 LMBRD1Q9NUN5 540 aa21.52■■□□□ 1.04
SS18-224ENST00000584083 ZSCAN32Q9NX65 697 aa21.52■■□□□ 1.04
SS18-224ENST00000584083 TBC1D14Q9P2M4 693 aa21.52■■□□□ 1.04
SS18-224ENST00000584083 HESX1Q9UBX0 185 aa21.52■■□□□ 1.04
SS18-224ENST00000584083 NAGPAQ9UK23 515 aa21.52■■□□□ 1.04
SS18-224ENST00000584083 VPS13AQ96RL7 3174 aa21.51■■□□□ 1.03
SS18-224ENST00000584083 TBX18O95935 607 aa21.51■■□□□ 1.03
SS18-224ENST00000584083 EGFP01133 1207 aa21.51■■□□□ 1.03
SS18-224ENST00000584083 RARGP13631 454 aa21.51■■□□□ 1.03
SS18-224ENST00000584083 DRD1P21728 446 aa21.51■■□□□ 1.03
SS18-224ENST00000584083 ATP5C1P36542 298 aaKnown RBP21.51■■□□□ 1.03
SS18-224ENST00000584083 RRAGAQ7L523 313 aa21.51■■□□□ 1.03
SS18-224ENST00000584083 CCDC186Q7Z3E2 898 aa21.51■■□□□ 1.03
SS18-224ENST00000584083 PIGZQ86VD9 579 aa21.51■■□□□ 1.03
SS18-224ENST00000584083 TTC30AQ86WT1 665 aa21.51■■□□□ 1.03
SS18-224ENST00000584083 ADGRG2Q8IZP9 1017 aa21.51■■□□□ 1.03
SS18-224ENST00000584083 UBR7Q8N806 425 aa21.51■■□□□ 1.03
SS18-224ENST00000584083 KAT5Q92993 513 aa21.51■■□□□ 1.03
SS18-224ENST00000584083 UBXN6Q9BZV1 441 aa21.51■■□□□ 1.03
SS18-224ENST00000584083 INTS2Q9H0H0 1204 aaKnown RBP21.51■■□□□ 1.03
SS18-224ENST00000584083 CYLDQ9NQC7 956 aa21.51■■□□□ 1.03
SS18-224ENST00000584083 OSER1Q9NX31 292 aa21.51■■□□□ 1.03
SS18-224ENST00000584083 TSPAN16Q9UKR8 245 aa21.51■■□□□ 1.03
SS18-224ENST00000584083 KIAA1257Q9ULG3 409 aa21.51■■□□□ 1.03
SS18-224ENST00000584083 PCDHGA2Q9Y5H1 932 aa21.51■■□□□ 1.03
SS18-224ENST00000584083 LMNAP02545 664 aaKnown RBP21.5■■□□□ 1.03
SS18-224ENST00000584083 CYP17A1P05093 508 aa21.5■■□□□ 1.03
SS18-224ENST00000584083 PSEN1P49768 467 aa21.5■■□□□ 1.03
SS18-224ENST00000584083 BCAT1P54687 386 aa21.5■■□□□ 1.03
SS18-224ENST00000584083 NRLP54845 237 aa21.5■■□□□ 1.03
SS18-224ENST00000584083 DHCR24Q15392 516 aa21.5■■□□□ 1.03
SS18-224ENST00000584083 C10orf120Q5SQS8 335 aa21.5■■□□□ 1.03
SS18-224ENST00000584083 ARHGEF19Q8IW93 802 aa21.5■■□□□ 1.03
SS18-224ENST00000584083 MED15Q96RN5 788 aa21.5■■□□□ 1.03
SS18-224ENST00000584083 FAM126AQ9BYI3 521 aaPredicted RBP21.5■■□□□ 1.03
SS18-224ENST00000584083 NUDT5Q9UKK9 219 aa21.5■■□□□ 1.03
SS18-224ENST00000584083 USP3Q9Y6I4 520 aa21.5■■□□□ 1.03
SS18-224ENST00000584083 PAEPP09466 180 aa21.49■■□□□ 1.03
SS18-224ENST00000584083 RALAP11233 206 aa21.49■■□□□ 1.03
SS18-224ENST00000584083 MTIF2P46199 727 aaKnown RBP21.49■■□□□ 1.03
SS18-224ENST00000584083 PDE4CQ08493 712 aa21.49■■□□□ 1.03
SS18-224ENST00000584083 GOLGA8FQ08AF8 430 aa21.49■■□□□ 1.03
SS18-224ENST00000584083 GOLGA8DPQ0D2H9 430 aa21.49■■□□□ 1.03
SS18-224ENST00000584083 DPCR1Q3MIW9 517 aa21.49■■□□□ 1.03
SS18-224ENST00000584083 SCD5Q86SK9 330 aa21.49■■□□□ 1.03
SS18-224ENST00000584083 TADA2BQ86TJ2 420 aa21.49■■□□□ 1.03
SS18-224ENST00000584083 UBA3Q8TBC4 463 aa21.49■■□□□ 1.03
SS18-224ENST00000584083 KLF16Q9BXK1 252 aaPredicted RBP21.49■■□□□ 1.03
SS18-224ENST00000584083 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.49■■□□□ 1.03
SS18-224ENST00000584083 DACH1Q9UI36 760 aa21.49■■□□□ 1.03
SS18-224ENST00000584083 DNMT3LQ9UJW3 386 aa21.49■■□□□ 1.03
SS18-224ENST00000584083 O00370 1275 aa21.48■■□□□ 1.03
SS18-224ENST00000584083 XPO1O14980 1071 aaKnown RBP21.48■■□□□ 1.03
SS18-224ENST00000584083 MDM4O15151 490 aa21.48■■□□□ 1.03
SS18-224ENST00000584083 ATG13O75143 517 aa21.48■■□□□ 1.03
SS18-224ENST00000584083 RNF40O75150 1001 aa21.48■■□□□ 1.03
SS18-224ENST00000584083 ADH1CP00326 375 aa21.48■■□□□ 1.03
SS18-224ENST00000584083 TKTL1P51854 596 aa21.48■■□□□ 1.03
SS18-224ENST00000584083 GCNT1Q02742 428 aa21.48■■□□□ 1.03
SS18-224ENST00000584083 BST2Q10589 180 aaKnown RBP21.48■■□□□ 1.03
SS18-224ENST00000584083 FBXO43Q4G163 708 aa21.48■■□□□ 1.03
SS18-224ENST00000584083 ARHGAP18Q8N392 663 aa21.48■■□□□ 1.03
SS18-224ENST00000584083 RBBP8NLQ8NC74 664 aaPredicted RBP21.48■■□□□ 1.03
SS18-224ENST00000584083 ZBTB44Q8NCP5 570 aa21.48■■□□□ 1.03
SS18-224ENST00000584083 NELL1Q92832 810 aa21.48■■□□□ 1.03
SS18-224ENST00000584083 WBP2Q969T9 261 aa21.48■■□□□ 1.03
SS18-224ENST00000584083 OTUB2Q96DC9 234 aa21.48■■□□□ 1.03
SS18-224ENST00000584083 CRACR2AQ9BSW2 395 aa21.48■■□□□ 1.03
SS18-224ENST00000584083 LRRC4Q9HBW1 653 aa21.48■■□□□ 1.03
SS18-224ENST00000584083 RIF1Q5UIP0 2472 aaKnown RBP21.47■■□□□ 1.03
SS18-224ENST00000584083 RNF225M0QZC1 329 aaPredicted RBP21.47■■□□□ 1.03
SS18-224ENST00000584083 TULP2O00295 520 aa21.47■■□□□ 1.03
SS18-224ENST00000584083 ADH5P11766 374 aa21.47■■□□□ 1.03
SS18-224ENST00000584083 TDGF1P13385 188 aa21.47■■□□□ 1.03
SS18-224ENST00000584083 OPRD1P41143 372 aa21.47■■□□□ 1.03
SS18-224ENST00000584083 RAB41Q5JT25 222 aa21.47■■□□□ 1.03
SS18-224ENST00000584083 LY6G5CQ5SRR4 150 aa21.47■■□□□ 1.03
SS18-224ENST00000584083 PKN3Q6P5Z2 889 aa21.47■■□□□ 1.03
SS18-224ENST00000584083 KLHDC10Q6PID8 442 aa21.47■■□□□ 1.03
SS18-224ENST00000584083 RHBDF2Q6PJF5 856 aa21.47■■□□□ 1.03
SS18-224ENST00000584083 IRF2BP1Q8IU81 584 aa21.47■■□□□ 1.03
SS18-224ENST00000584083 BBS7Q8IWZ6 715 aa21.47■■□□□ 1.03
SS18-224ENST00000584083 TFAP2BQ92481 460 aa21.47■■□□□ 1.03
SS18-224ENST00000584083 KREMEN1Q96MU8 473 aa21.47■■□□□ 1.03
SS18-224ENST00000584083 UBE2TQ9NPD8 197 aaPredicted RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms