RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 MTMR12Q9C0I1 747 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 LINC00597Q9H2U6 94 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 CCSER2Q9H7U1 834 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 MRPL44Q9H9J2 332 aaKnown RBP8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 CAPN10Q9HC96 672 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 ABCB6Q9NP58 842 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 GCNT4Q9P109 453 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 EBF1Q9UH73 591 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 SIX4Q9UIU6 781 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 EXOC7Q9UPT5 735 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 SMC3Q9UQE7 1217 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 FRYQ5TBA9 3013 aa8.34□□□□□ -1.07
SMCHD1-210ENST00000583800 CEP295Q9C0D2 2601 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 PTPRJQ12913 1337 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 CHD6Q8TD26 2715 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 CACNA1GO43497 2377 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 C1QTNF9BB2RNN3 333 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 PATE3B3GLJ2 98 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 MAN1A2O60476 641 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 ATP2C2O75185 946 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 TMEM191BP0C7N4 346 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 C1QTNF9P0C862 333 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 OPRD1P41143 372 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 ZXDBP98169 803 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 ZNF252P-AS1Q0IIN9 211 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 AGERQ15109 404 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 SOWAHAQ2M3V2 549 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 GAB4Q2WGN9 574 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 C2orf27AQ580R0 203 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 C4orf48Q5BLP8 95 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 LARP1BQ659C4 914 aaKnown RBP8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 ANO7Q6IWH7 933 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 BRAPQ7Z569 592 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 BPHLQ86WA6 291 aaPredicted RBP8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 RASSF3Q86WH2 238 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 CSGALNACT2Q8N6G5 542 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 TOP6BLQ8N6T0 577 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 MDGA1Q8NFP4 955 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 USP33Q8TEY7 942 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 CACTINQ8WUQ7 758 aaKnown RBP8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 MYLPFQ96A32 169 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 DNAJC19Q96DA6 116 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 FUBP3Q96I24 572 aaKnown RBP eCLIP8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 ACCSQ96QU6 501 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 SYT15Q9BQS2 421 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 PCIF1Q9H4Z3 704 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 PDE11AQ9HCR9 933 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 GDAP2Q9NXN4 497 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 SEL1LQ9UBV2 794 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 ITGA11Q9UKX5 1188 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 ARHGAP26Q9UNA1 814 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 CLIC4Q9Y696 253 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 FAM208BQ5VWN6 2430 aa8.33□□□□□ -1.08
SMCHD1-210ENST00000583800 K7EQS6 105 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 LEFTY2O00292 366 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 GABRDO14764 452 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 PRPF6O94906 941 aaKnown RBP8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 NFATC1O95644 943 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 TOP3BO95985 862 aaKnown RBP8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 LDHAP00338 332 aaKnown RBP8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 CYP17A1P05093 508 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 PROS1P07225 676 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 IDEP14735 1019 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 HNRNPLP14866 589 aaKnown RBP eCLIP8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 GAP43P17677 238 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 HDCP19113 662 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 SPINK2P20155 84 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 GARTP22102 1010 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 BDNFP23560 247 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 MPSTP25325 297 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 LMO2P25791 158 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 PCSK1P29120 753 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 MAGEA11P43364 429 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 LHX1P48742 406 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 DHPSP49366 369 aaPredicted RBP8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 RBP5P82980 135 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 EHHADHQ08426 723 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 USP39Q53GS9 565 aaKnown RBP8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 SH3PXD2AQ5TCZ1 1133 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 FAM171BQ6P995 826 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 UNQ6494/PRO21346Q6UXR6 183 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 CYP2U1Q7Z449 544 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 TTC30AQ86WT1 665 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 SFTPA1Q8IWL2 248 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 SYCP3Q8IZU3 236 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 CCDC33Q8N5R6 958 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 FSIP1Q8NA03 581 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 OR5B17Q8NGF7 314 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 SPATA18Q8TC71 538 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 KBTBD7Q8WVZ9 684 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 CNOT6LQ96LI5 555 aaKnown RBP8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 DMRTB1Q96MA1 342 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 CLIC6Q96NY7 704 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 ACBD3Q9H3P7 528 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 CRTAC1Q9NQ79 661 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 CCDC39Q9UFE4 941 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 FBXO2Q9UK22 296 aaPredicted RBP8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 MMP17Q9ULZ9 603 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 IGF2RP11717 2491 aa8.32□□□□□ -1.08
SMCHD1-210ENST00000583800 PCNX2A6NKB5 2137 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms