RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 AOPEPQ8N6M6 819 aa26.27■■□□□ 1.8
TSEN54-209ENST00000583454 CELF5Q8N6W0 485 aaKnown RBP26.27■■□□□ 1.8
TSEN54-209ENST00000583454 USP13Q92995 863 aaPredicted RBP26.27■■□□□ 1.8
TSEN54-209ENST00000583454 FAM81BQ96LP2 452 aa26.27■■□□□ 1.8
TSEN54-209ENST00000583454 FAM83CQ9BQN1 747 aa26.27■■□□□ 1.8
TSEN54-209ENST00000583454 TAB2Q9NYJ8 693 aa26.27■■□□□ 1.8
TSEN54-209ENST00000583454 IL37Q9NZH6 218 aa26.27■■□□□ 1.8
TSEN54-209ENST00000583454 APEX2Q9UBZ4 518 aa26.27■■□□□ 1.8
TSEN54-209ENST00000583454 LIMA1Q9UHB6 759 aaKnown RBP26.27■■□□□ 1.8
TSEN54-209ENST00000583454 PCDHB4Q9Y5E5 795 aa26.27■■□□□ 1.8
TSEN54-209ENST00000583454 MYO16Q9Y6X6 1858 aa26.26■■□□□ 1.79
TSEN54-209ENST00000583454 KIAA1549LQ6ZVL6 1849 aa26.26■■□□□ 1.79
TSEN54-209ENST00000583454 RNF225M0QZC1 329 aaPredicted RBP26.26■■□□□ 1.79
TSEN54-209ENST00000583454 PAEPP09466 180 aa26.26■■□□□ 1.79
TSEN54-209ENST00000583454 HOXC13P31276 330 aa26.26■■□□□ 1.79
TSEN54-209ENST00000583454 ZNF132P52740 706 aa26.26■■□□□ 1.79
TSEN54-209ENST00000583454 NRLP54845 237 aa26.26■■□□□ 1.79
TSEN54-209ENST00000583454 PON2Q15165 354 aa26.26■■□□□ 1.79
TSEN54-209ENST00000583454 SMYD5Q6GMV2 418 aa26.26■■□□□ 1.79
TSEN54-209ENST00000583454 CLEC20AQ6ZU45 233 aa26.26■■□□□ 1.79
TSEN54-209ENST00000583454 DHX40Q8IX18 779 aaKnown RBP26.26■■□□□ 1.79
TSEN54-209ENST00000583454 DUSP16Q9BY84 665 aa26.26■■□□□ 1.79
TSEN54-209ENST00000583454 SIX2Q9NPC8 291 aa26.26■■□□□ 1.79
TSEN54-209ENST00000583454 HPS4Q9NQG7 708 aa26.26■■□□□ 1.79
TSEN54-209ENST00000583454 ZMYM5Q9UJ78 669 aa26.26■■□□□ 1.79
TSEN54-209ENST00000583454 EML5Q05BV3 1969 aa26.26■■□□□ 1.79
TSEN54-209ENST00000583454 OTOL1A6NHN0 477 aaPredicted RBP26.25■■□□□ 1.79
TSEN54-209ENST00000583454 ZNF165P49910 485 aa26.25■■□□□ 1.79
TSEN54-209ENST00000583454 MAP3K7CLP57077 242 aa26.25■■□□□ 1.79
TSEN54-209ENST00000583454 APBA1Q02410 837 aa26.25■■□□□ 1.79
TSEN54-209ENST00000583454 KCNMA1Q12791 1236 aa26.25■■□□□ 1.79
TSEN54-209ENST00000583454 PPP2R5DQ14738 602 aa26.25■■□□□ 1.79
TSEN54-209ENST00000583454 ZSCAN23Q3MJ62 389 aa26.25■■□□□ 1.79
TSEN54-209ENST00000583454 DGKKQ5KSL6 1271 aa26.25■■□□□ 1.79
TSEN54-209ENST00000583454 TXNDC8Q6A555 127 aa26.25■■□□□ 1.79
TSEN54-209ENST00000583454 GJB7Q6PEY0 223 aa26.25■■□□□ 1.79
TSEN54-209ENST00000583454 MAB21L3Q8N8X9 362 aa26.25■■□□□ 1.79
TSEN54-209ENST00000583454 VPS16Q9H269 839 aa26.25■■□□□ 1.79
TSEN54-209ENST00000583454 PARD6AQ9NPB6 346 aa26.25■■□□□ 1.79
TSEN54-209ENST00000583454 COMMD8Q9NX08 183 aa26.25■■□□□ 1.79
TSEN54-209ENST00000583454 RALGAPA1Q6GYQ0 2036 aa26.25■■□□□ 1.79
TSEN54-209ENST00000583454 SPAG17Q6Q759 2223 aa26.24■■□□□ 1.79
TSEN54-209ENST00000583454 MED19A0JLT2 244 aaPredicted RBP26.24■■□□□ 1.79
TSEN54-209ENST00000583454 RTN3O95197 1032 aaPredicted RBP26.24■■□□□ 1.79
TSEN54-209ENST00000583454 VDRP11473 427 aa26.24■■□□□ 1.79
TSEN54-209ENST00000583454 DDX6P26196 483 aaKnown RBP eCLIP26.24■■□□□ 1.79
TSEN54-209ENST00000583454 MFAP3P55082 362 aa26.24■■□□□ 1.79
TSEN54-209ENST00000583454 PUM1Q14671 1186 aaKnown RBP eCLIP26.24■■□□□ 1.79
TSEN54-209ENST00000583454 NFKBIBQ15653 356 aa26.24■■□□□ 1.79
TSEN54-209ENST00000583454 ITPRIPL2Q3MIP1 535 aa26.24■■□□□ 1.79
TSEN54-209ENST00000583454 SGO2Q562F6 1265 aa26.24■■□□□ 1.79
TSEN54-209ENST00000583454 APTXQ7Z2E3 356 aaKnown RBP26.24■■□□□ 1.79
TSEN54-209ENST00000583454 MON1AQ86VX9 555 aa26.24■■□□□ 1.79
TSEN54-209ENST00000583454 ANKRD52Q8NB46 1076 aa26.24■■□□□ 1.79
TSEN54-209ENST00000583454 MRPS31Q92665 395 aaKnown RBP26.24■■□□□ 1.79
TSEN54-209ENST00000583454 GKN1Q9NS71 199 aa26.24■■□□□ 1.79
TSEN54-209ENST00000583454 FAM92AA1XBS5 289 aa26.23■■□□□ 1.79
TSEN54-209ENST00000583454 SMTNL1A8MU46 457 aa26.23■■□□□ 1.79
TSEN54-209ENST00000583454 HHLA1C9JL84 531 aa26.23■■□□□ 1.79
TSEN54-209ENST00000583454 PES1O00541 588 aaKnown RBP26.23■■□□□ 1.79
TSEN54-209ENST00000583454 COPB1P53618 953 aaKnown RBP26.23■■□□□ 1.79
TSEN54-209ENST00000583454 IQCB1Q15051 598 aa26.23■■□□□ 1.79
TSEN54-209ENST00000583454 RSPO4Q2I0M5 234 aaPredicted RBP26.23■■□□□ 1.79
TSEN54-209ENST00000583454 RBBP8NLQ8NC74 664 aaPredicted RBP26.23■■□□□ 1.79
TSEN54-209ENST00000583454 ANKRD20A12PQ8NF67 263 aa26.23■■□□□ 1.79
TSEN54-209ENST00000583454 SCAMP5Q8TAC9 235 aa26.23■■□□□ 1.79
TSEN54-209ENST00000583454 UBXN6Q9BZV1 441 aa26.23■■□□□ 1.79
TSEN54-209ENST00000583454 PNPLA8Q9NP80 782 aa26.23■■□□□ 1.79
TSEN54-209ENST00000583454 LAMA1P25391 3075 aa26.22■■□□□ 1.79
TSEN54-209ENST00000583454 CHURC1-FNTBB4DL54 471 aa26.22■■□□□ 1.79
TSEN54-209ENST00000583454 O00370 1275 aa26.22■■□□□ 1.79
TSEN54-209ENST00000583454 HRO43593 1189 aa26.22■■□□□ 1.79
TSEN54-209ENST00000583454 TPM2P07951 284 aa26.22■■□□□ 1.79
TSEN54-209ENST00000583454 CD19P15391 556 aa26.22■■□□□ 1.79
TSEN54-209ENST00000583454 YWHAQP27348 245 aa26.22■■□□□ 1.79
TSEN54-209ENST00000583454 AVPR1AP37288 418 aa26.22■■□□□ 1.79
TSEN54-209ENST00000583454 PPP3CCP48454 512 aa26.22■■□□□ 1.79
TSEN54-209ENST00000583454 FNTBP49356 437 aa26.22■■□□□ 1.79
TSEN54-209ENST00000583454 SLC5A3P53794 718 aa26.22■■□□□ 1.79
TSEN54-209ENST00000583454 TAF10Q12962 218 aa26.22■■□□□ 1.79
TSEN54-209ENST00000583454 TRIM68Q6AZZ1 485 aa26.22■■□□□ 1.79
TSEN54-209ENST00000583454 PKN3Q6P5Z2 889 aa26.22■■□□□ 1.79
TSEN54-209ENST00000583454 DGLUCYQ7Z3D6 616 aa26.22■■□□□ 1.79
TSEN54-209ENST00000583454 TFAP2BQ92481 460 aa26.22■■□□□ 1.79
TSEN54-209ENST00000583454 TDP1Q9NUW8 608 aa26.22■■□□□ 1.79
TSEN54-209ENST00000583454 THG1LQ9NWX6 298 aaKnown RBP26.22■■□□□ 1.79
TSEN54-209ENST00000583454 CDK11BP21127 795 aaKnown RBP26.21■■□□□ 1.79
TSEN54-209ENST00000583454 ZNF268Q14587 947 aaPredicted RBP26.21■■□□□ 1.79
TSEN54-209ENST00000583454 LPAL2Q16609 132 aa26.21■■□□□ 1.79
TSEN54-209ENST00000583454 TTC30AQ86WT1 665 aa26.21■■□□□ 1.79
TSEN54-209ENST00000583454 SYNPOQ8N3V7 929 aa26.21■■□□□ 1.79
TSEN54-209ENST00000583454 GPR161Q8N6U8 529 aaKnown RBP26.21■■□□□ 1.79
TSEN54-209ENST00000583454 OVCA2Q8WZ82 227 aa26.21■■□□□ 1.79
TSEN54-209ENST00000583454 SHC3Q92529 594 aa26.21■■□□□ 1.79
TSEN54-209ENST00000583454 SLC22A12Q96S37 553 aa26.21■■□□□ 1.79
TSEN54-209ENST00000583454 ZSWIM1Q9BR11 485 aa26.21■■□□□ 1.79
TSEN54-209ENST00000583454 KIF9Q9HAQ2 790 aa26.21■■□□□ 1.79
TSEN54-209ENST00000583454 TRPM5Q9NZQ8 1165 aa26.21■■□□□ 1.79
TSEN54-209ENST00000583454 TSPAN16Q9UKR8 245 aa26.21■■□□□ 1.79
TSEN54-209ENST00000583454 ZNF840PA6NDX5 716 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms