RNA–Protein interactions for RNA: ENST00000582985.1

DDX42-215, Transcript of DEAD-box helicase 42, human

TSL 4

Gene DDX42, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX42-215	ENST00000582985	TMEFF1	Q8IYR6	380 aa		10.13	□□□□□ -0.79
DDX42-215	ENST00000582985	PHTF2	Q8N3S3	785 aa		10.13	□□□□□ -0.79
DDX42-215	ENST00000582985	FRMD1	Q8N878	549 aa		10.13	□□□□□ -0.79
DDX42-215	ENST00000582985	SCAMP5	Q8TAC9	235 aa		10.13	□□□□□ -0.79
DDX42-215	ENST00000582985	HMGB4	Q8WW32	186 aa		10.13	□□□□□ -0.79
DDX42-215	ENST00000582985	SYAP1	Q96A49	352 aa	Predicted RBP	10.13	□□□□□ -0.79
DDX42-215	ENST00000582985	OTUB2	Q96DC9	234 aa		10.13	□□□□□ -0.79
DDX42-215	ENST00000582985	SMYD3	Q9H7B4	428 aa		10.13	□□□□□ -0.79
DDX42-215	ENST00000582985	ZDHHC4	Q9NPG8	344 aa		10.13	□□□□□ -0.79
DDX42-215	ENST00000582985	TFIP11	Q9UBB9	837 aa	Known RBP	10.13	□□□□□ -0.79
DDX42-215	ENST00000582985	CHORDC1	Q9UHD1	332 aa	Predicted RBP	10.13	□□□□□ -0.79
DDX42-215	ENST00000582985	EVL	Q9UI08	416 aa	Predicted RBP	10.13	□□□□□ -0.79
DDX42-215	ENST00000582985	MBD1	Q9UIS9	605 aa	Predicted RBP	10.13	□□□□□ -0.79
DDX42-215	ENST00000582985	TCRBV21S2A2	A0A5A6	115 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	TBC1D3B	A6NDS4	549 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	C1QTNF9B	B2RNN3	333 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	TNFRSF10B	O14763	440 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	HOXC11	O43248	304 aa	Predicted RBP	10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	EXOC3	O60645	756 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	CUTA	O60888	179 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	C1QTNF9	P0C862	333 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	CASP1	P29466	404 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	PTGER3	P43115	390 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	CASP4	P49662	377 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	TUB	P50607	506 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	SLC5A3	P53794	718 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	CDH8	P55286	799 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	LMAN2	Q12907	356 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	FOXC1	Q12948	553 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	BIRC3	Q13489	604 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	BYSL	Q13895	437 aa	Known RBP	10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	BMT2	Q1RMZ1	405 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	ZNF699	Q32M78	642 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	MAP7D1	Q3KQU3	841 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	UAP1L1	Q3KQV9	507 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	TRIM61	Q5EBN2	209 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	SNX30	Q5VWJ9	437 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	BTBD8	Q5XKL5	378 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	UNQ6494/PRO21346	Q6UXR6	183 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	PAQR9	Q6ZVX9	377 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	ARMCX6	Q7L4S7	300 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	SYT12	Q8IV01	421 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	BBS7	Q8IWZ6	715 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	ETFBKMT	Q8IXQ9	262 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	C12orf56	Q8IXR9	622 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	PGBD3	Q8N328	593 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	NAT16	Q8N8M0	369 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	PLEKHO2	Q8TD55	490 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	ZNF396	Q96N95	335 aa	Predicted RBP	10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	MED10	Q9BTT4	135 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	NUSAP1	Q9BXS6	441 aa	Known RBP	10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	BLZF1	Q9H2G9	400 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	CCSER2	Q9H7U1	834 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	VRTN	Q9H8Y1	702 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	MAGEF1	Q9HAY2	307 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	SLC39A2	Q9NP94	309 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	DMAP1	Q9NPF5	467 aa	Predicted RBP	10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	TMEM74B	Q9NUR3	256 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	IL37	Q9NZH6	218 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	GMIP	Q9P107	970 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	CGN	Q9P2M7	1197 aa	Known RBP	10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	WASF3	Q9UPY6	502 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	SH3BP1	Q9Y3L3	701 aa		10.12	□□□□□ -0.79
DDX42-215	ENST00000582985	MYOF	Q9NZM1	2061 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	FAM92A	A1XBS5	289 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	POLR2D	O15514	142 aa	Known RBP	10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	TULP3	O75386	442 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	AP1G2	O75843	785 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	CLSTN1	O94985	981 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	YEATS4	O95619	227 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	TOP3B	O95985	862 aa	Known RBP	10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	ZDHHC11B	P0C7U3	371 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	SPINK2	P20155	84 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	MAPK8	P45983	427 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	KNOP1	Q1ED39	458 aa	Known RBP	10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	ANO4	Q32M45	955 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	PREPL	Q4J6C6	727 aa	Predicted RBP	10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	ZNF667	Q5HYK9	610 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	SPDYC	Q5MJ68	293 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	LYSMD4	Q5XG99	296 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	SCARA5	Q6ZMJ2	495 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	TRMT11	Q7Z4G4	463 aa	Known RBP	10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	TMEM25	Q86YD3	366 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	FUK	Q8N0W3	1084 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	ZNF513	Q8N8E2	541 aa	Predicted RBP	10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	DEFB124	Q8NES8	71 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	KCNV2	Q8TDN2	545 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	WBP2	Q969T9	261 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	ELMO3	Q96BJ8	720 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	SMARCD1	Q96GM5	515 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	TNIP3	Q96KP6	325 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	DUSP9	Q99956	384 aa	Known RBP	10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	SDCBP2	Q9H190	292 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	SPHK2	Q9NRA0	654 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	KRT82	Q9NSB4	513 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	COMMD8	Q9NX08	183 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	DEC1	Q9P2X7	70 aa		10.11	□□□□□ -0.79
DDX42-215	ENST00000582985	ATXN2	Q99700	1313 aa	Known RBP	10.1	□□□□□ -0.79
DDX42-215	ENST00000582985	TNRC6B	Q9UPQ9	1833 aa	Known RBP	10.1	□□□□□ -0.79
DDX42-215	ENST00000582985	PVALEF	A0A1B0GWK0	134 aa		10.1	□□□□□ -0.79

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