RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 TMEM176AQ96HP8 235 aa8.24□□□□□ -1.09
SMARCE1-217ENST00000580654 ARID3AQ99856 593 aa8.24□□□□□ -1.09
SMARCE1-217ENST00000580654 GABRG3Q99928 467 aa8.24□□□□□ -1.09
SMARCE1-217ENST00000580654 PYM1Q9BRP8 204 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-217ENST00000580654 GPR174Q9BXC1 333 aa8.24□□□□□ -1.09
SMARCE1-217ENST00000580654 TRIM4Q9C037 500 aa8.24□□□□□ -1.09
SMARCE1-217ENST00000580654 NRSN2Q9GZP1 204 aa8.24□□□□□ -1.09
SMARCE1-217ENST00000580654 MIR1-1HGQ9H1L0 117 aa8.24□□□□□ -1.09
SMARCE1-217ENST00000580654 CPNE5Q9HCH3 593 aa8.24□□□□□ -1.09
SMARCE1-217ENST00000580654 IL17BQ9UHF5 180 aa8.24□□□□□ -1.09
SMARCE1-217ENST00000580654 DSEQ9UL01 958 aa8.24□□□□□ -1.09
SMARCE1-217ENST00000580654 STARD13Q9Y3M8 1113 aa8.24□□□□□ -1.09
SMARCE1-217ENST00000580654 SNX11Q9Y5W9 270 aa8.24□□□□□ -1.09
SMARCE1-217ENST00000580654 TBC1D3BA6NDS4 549 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 SFI1A8K8P3 1242 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 METTL12A8MUP2 240 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 CBX4O00257 560 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 KCNK3O14649 394 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 CPLX1O14810 134 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 CLDN3O15551 220 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 XPOTO43592 962 aaKnown RBP8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 TULP3O75386 442 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 JUPP14923 745 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 PAX3P23760 479 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 CSNK1EP49674 416 aaKnown RBP8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 USP46P62068 366 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 RPL10AP62906 217 aaKnown RBP8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 STK3Q13188 491 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 KIF19Q2TAC6 998 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 KCNT1Q5JUK3 1230 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 C10orf76Q5T2E6 689 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 LCE2CQ5TA81 110 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 ARHGAP40Q5TG30 622 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 ZPBP2Q6X784 338 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 USP49Q70CQ1 688 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 METTL23Q86XA0 190 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 TERB1Q8NA31 727 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 TMEM161BQ8NDZ6 487 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 ZNF274Q96GC6 653 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 NTPCRQ9BSD7 190 aaKnown RBP8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 RUSC1Q9BVN2 902 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 CCSER1Q9C0I3 900 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 SMPD4Q9NXE4 827 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 USP36Q9P275 1121 aaKnown RBP8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 EIF2B4Q9UI10 523 aaKnown RBP8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 RBM19Q9Y4C8 960 aaKnown RBP8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 CPQQ9Y646 472 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 NBPF19A0A087WUL8 3843 aa8.23□□□□□ -1.09
SMARCE1-217ENST00000580654 MYH10P35580 1976 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 KNL1Q8NG31 2342 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 WASH3PC4AMC7 463 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 H0Y8X5 98 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 HCRTO43612 131 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 PCDHGA12O60330 932 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 KRT38O76015 456 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 ADH1CP00326 375 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 MAPTP10636 758 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 ACAT1P24752 427 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 ADSSP30520 456 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 KRT2P35908 639 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 GRK6P43250 576 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 GAD2Q05329 585 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 DNAJC3Q13217 504 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 PDIA5Q14554 519 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 SUZ12Q15022 739 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 SF3A1Q15459 793 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 NFE2Q16621 373 aaPredicted RBP8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 TBC1D25Q3MII6 688 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 HES3Q5TGS1 186 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 SCARA3Q6AZY7 606 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 FBXL19Q6PCT2 694 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 KIAA1324Q6UXG2 1013 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 METTL3Q86U44 580 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 FSIP1Q8NA03 581 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 CADM4Q8NFZ8 388 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 MED8Q96G25 268 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 ABCB6Q9NP58 842 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 CFAP97Q9P2B7 532 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 NXF1Q9UBU9 619 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 GTF3C4Q9UKN8 822 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 PCDHGA1Q9Y5H4 931 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 CREBBPQ92793 2442 aa8.22□□□□□ -1.09
SMARCE1-217ENST00000580654 PLXNA2O75051 1894 aa8.21□□□□□ -1.09
SMARCE1-217ENST00000580654 CKAP5Q14008 2032 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 ZNF840PA6NDX5 716 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 FAM181BA6NEQ2 426 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 PRRT4C9JH25 899 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 E9PMD0 336 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 SLC9A3R1O14745 358 aaPredicted RBP8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 TERTO14746 1132 aaKnown RBP8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 HOXC11O43248 304 aaPredicted RBP8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 PAPSS1O43252 624 aaPredicted RBP8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 TRAK2O60296 914 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 CTDNEP1O95476 244 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 OAS1P00973 400 aaKnown RBP8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 PFKLP17858 780 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 MUTP22033 750 aa8.21□□□□□ -1.1
SMARCE1-217ENST00000580654 HNF1BP35680 557 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms