RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 PDE4CQ08493 712 aa12.79□□□□□ -0.36
CCDC84-209ENST00000580556 MAPK8IP2Q13387 824 aaPredicted RBP12.79□□□□□ -0.36
CCDC84-209ENST00000580556 TDRD12Q587J7 1177 aaKnown RBP12.79□□□□□ -0.36
CCDC84-209ENST00000580556 ZNF571Q7Z3V5 609 aaPredicted RBP12.79□□□□□ -0.36
CCDC84-209ENST00000580556 TMEM35BQ8NCS4 154 aa12.79□□□□□ -0.36
CCDC84-209ENST00000580556 ZMIZ2Q8NF64 920 aa12.79□□□□□ -0.36
CCDC84-209ENST00000580556 PJA1Q8NG27 643 aa12.79□□□□□ -0.36
CCDC84-209ENST00000580556 KCTD13Q8WZ19 329 aa12.79□□□□□ -0.36
CCDC84-209ENST00000580556 SECISBP2LQ93073 1101 aaKnown RBP12.79□□□□□ -0.36
CCDC84-209ENST00000580556 ZNF707Q96C28 371 aaPredicted RBP12.79□□□□□ -0.36
CCDC84-209ENST00000580556 HSFY1Q96LI6 401 aa12.79□□□□□ -0.36
CCDC84-209ENST00000580556 NOX5Q96PH1 765 aa12.79□□□□□ -0.36
CCDC84-209ENST00000580556 COMMD8Q9NX08 183 aa12.79□□□□□ -0.36
CCDC84-209ENST00000580556 EHD2Q9NZN4 543 aa12.79□□□□□ -0.36
CCDC84-209ENST00000580556 ARHGAP20Q9P2F6 1191 aa12.79□□□□□ -0.36
CCDC84-209ENST00000580556 SLC27A5Q9Y2P5 690 aa12.79□□□□□ -0.36
CCDC84-209ENST00000580556 MTF2Q9Y483 593 aaPredicted RBP12.79□□□□□ -0.36
CCDC84-209ENST00000580556 DOCK6Q96HP0 2047 aa12.79□□□□□ -0.36
CCDC84-209ENST00000580556 HHLA1C9JL84 531 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 BEST1O76090 585 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 LRG1P02750 347 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 CYP1A1P04798 512 aaPredicted RBP12.78□□□□□ -0.36
CCDC84-209ENST00000580556 GZMAP12544 262 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 TGM1P22735 817 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 EPHB3P54753 998 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 MAP3K7CLP57077 242 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 NOMO3P69849 1222 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 CENPCQ03188 943 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 GOLGA8FQ08AF8 430 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 GOLGA8DPQ0D2H9 430 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 TWF1Q12792 350 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 PDCLQ13371 301 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 VEPH1Q14D04 833 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 CLEC16AQ2KHT3 1053 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 RAB41Q5JT25 222 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 PPM1LQ5SGD2 360 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 TAF3Q5VWG9 929 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 DENND1BQ6P3S1 775 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 GET4Q7L5D6 327 aaPredicted RBP12.78□□□□□ -0.36
CCDC84-209ENST00000580556 ITIH5Q86UX2 942 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 SCN4BQ8IWT1 228 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 SLC30A5Q8TAD4 765 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 SMG7Q92540 1137 aaKnown RBP12.78□□□□□ -0.36
CCDC84-209ENST00000580556 PSMG2Q969U7 264 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 TRMT2BQ96GJ1 504 aaKnown RBP12.78□□□□□ -0.36
CCDC84-209ENST00000580556 KCNK16Q96T55 309 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 PDCL3Q9H2J4 239 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 SPATA6Q9NWH7 488 aaPredicted RBP12.78□□□□□ -0.36
CCDC84-209ENST00000580556 IL37Q9NZH6 218 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 NUMBLQ9Y6R0 609 aa12.78□□□□□ -0.36
CCDC84-209ENST00000580556 FAM92AA1XBS5 289 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 TNFRSF10BO14763 440 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 XYLBO75191 536 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 RTN3O95197 1032 aaPredicted RBP12.77□□□□□ -0.37
CCDC84-209ENST00000580556 CSH1P0DML2 217 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 CSH2P0DML3 217 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 SKILP12757 684 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 UNGP13051 313 aaPredicted RBP12.77□□□□□ -0.37
CCDC84-209ENST00000580556 LAMP2P13473 410 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 ACADSBP45954 432 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 SNX16P57768 344 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 STARD6P59095 220 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 GPC5P78333 572 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 CSTF1Q05048 431 aaKnown RBP12.77□□□□□ -0.37
CCDC84-209ENST00000580556 HTR4Q13639 388 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 DDR2Q16832 855 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 ASTE1Q2TB18 679 aaPredicted RBP12.77□□□□□ -0.37
CCDC84-209ENST00000580556 TSSK4Q6SA08 328 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 DENND5BQ6ZUT9 1274 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 TMEM110Q86TL2 294 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 PIGZQ86VD9 579 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 TMTC1Q8IUR5 882 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 GPIHBP1Q8IV16 184 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 PASD1Q8IV76 773 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 NUP93Q8N1F7 819 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 SCML4Q8N228 414 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 ELMOD1Q8N336 334 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 WDTC1Q8N5D0 677 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 LEMD2Q8NC56 503 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 MSANTD4Q8NCY6 345 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 CCDC112Q8NEF3 446 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 UBA3Q8TBC4 463 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 MYRFLQ96LU7 910 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 TTLL2Q9BWV7 592 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 SLC4A5Q9BY07 1137 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 PRKD2Q9BZL6 878 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 MIS12Q9H081 205 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 PARD6AQ9NPB6 346 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 CDV3Q9UKY7 258 aaKnown RBP12.77□□□□□ -0.37
CCDC84-209ENST00000580556 MTCL1Q9Y4B5 1905 aaKnown RBP12.77□□□□□ -0.37
CCDC84-209ENST00000580556 NCANO14594 1321 aa12.77□□□□□ -0.37
CCDC84-209ENST00000580556 ANHXE9PGG2 379 aa12.76□□□□□ -0.37
CCDC84-209ENST00000580556 TULP2O00295 520 aa12.76□□□□□ -0.37
CCDC84-209ENST00000580556 DDX3XO00571 662 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCDC84-209ENST00000580556 SOAT2O75908 522 aa12.76□□□□□ -0.37
CCDC84-209ENST00000580556 PLEKP08567 350 aaPredicted RBP12.76□□□□□ -0.37
CCDC84-209ENST00000580556 ADRB1P08588 477 aa12.76□□□□□ -0.37
CCDC84-209ENST00000580556 TNFAIP3P21580 790 aa12.76□□□□□ -0.37
CCDC84-209ENST00000580556 CD72P21854 359 aa12.76□□□□□ -0.37
CCDC84-209ENST00000580556 EIF4A3P38919 411 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms