RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 CSNK1G1Q9HCP0 422 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.51■□□□□ 0.074e-8■□□□□ 8
CDK5RAP3-218ENST00000580391 CALCOCO1Q9P1Z2 691 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 PCDH10Q9P2E7 1040 aa15.51■□□□□ 0.07
CDK5RAP3-218ENST00000580391 TBKBP1A7MCY6 615 aa15.5■□□□□ 0.07
CDK5RAP3-218ENST00000580391 RPL21P46778 160 aaKnown RBP15.5■□□□□ 0.07
CDK5RAP3-218ENST00000580391 SLC11A1P49279 550 aa15.5■□□□□ 0.07
CDK5RAP3-218ENST00000580391 CDH6P55285 790 aa15.5■□□□□ 0.07
CDK5RAP3-218ENST00000580391 DAOAP59103 153 aa15.5■□□□□ 0.07
CDK5RAP3-218ENST00000580391 MMRN1Q13201 1228 aa15.5■□□□□ 0.07
CDK5RAP3-218ENST00000580391 NNTQ13423 1086 aa15.5■□□□□ 0.07
CDK5RAP3-218ENST00000580391 CA9Q16790 459 aa15.5■□□□□ 0.07
CDK5RAP3-218ENST00000580391 ZC3H12AQ5D1E8 599 aaKnown RBP15.5■□□□□ 0.07
CDK5RAP3-218ENST00000580391 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.5■□□□□ 0.071e-10■■■■■ 46
CDK5RAP3-218ENST00000580391 EIF1ADQ8N9N8 165 aaKnown RBP15.5■□□□□ 0.07
CDK5RAP3-218ENST00000580391 CENPIQ92674 756 aaPredicted RBP15.5■□□□□ 0.07
CDK5RAP3-218ENST00000580391 VWCEQ96DN2 955 aa15.5■□□□□ 0.07
CDK5RAP3-218ENST00000580391 CALN1Q9BXU9 219 aa15.5■□□□□ 0.07
CDK5RAP3-218ENST00000580391 GRHL1Q9NZI5 618 aa15.5■□□□□ 0.07
CDK5RAP3-218ENST00000580391 OGFRQ9NZT2 677 aa15.5■□□□□ 0.07
CDK5RAP3-218ENST00000580391 ADAM28Q9UKQ2 775 aa15.5■□□□□ 0.07
CDK5RAP3-218ENST00000580391 LIASO43766 372 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 TADA2AO75478 443 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 PARNO95453 639 aaKnown RBP15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 DESP17661 470 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 MATKP42679 507 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 GJA8P48165 433 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 SULT1E1P49888 294 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 ARSEP51690 589 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 PPP1R7Q15435 360 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 DNAJC5GQ8N7S2 189 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 B3GALT6Q96L58 329 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 DMAP1Q9NPF5 467 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 TMEM39AQ9NV64 488 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 DNPEPQ9ULA0 475 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 PTPRSQ13332 1948 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 PLXNA3P51805 1871 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 YJEFN3A6XGL0 299 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 E7ENQ6 273 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 HOXA2O43364 376 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 RRP9O43818 475 aaKnown RBP15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 CST8O60676 142 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 USP17L7P0C7H9 530 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 YWHAZP63104 245 aaKnown RBP15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 DPYSL3Q14195 570 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 TRIP13Q15645 432 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 LRRC26Q2I0M4 334 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 DCAF6Q58WW2 860 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 ZDHHC24Q6UX98 284 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 BBS12Q6ZW61 710 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 BHLHA9Q7RTU4 235 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 RFX6Q8HWS3 928 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 TEKT4Q8WW24 435 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 PAWRQ96IZ0 340 aaKnown RBP15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 SLC2A13Q96QE2 648 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 GPR62Q9BZJ7 368 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 CNGB3Q9NQW8 809 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 HOMER3Q9NSC5 361 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 ZDHHC18Q9NUE0 388 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 SAE1Q9UBE0 346 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 EFR3BQ9Y2G0 817 aa15.49■□□□□ 0.07
CDK5RAP3-218ENST00000580391 NT5C1B-RDH14C9J2C7 533 aa15.48■□□□□ 0.07
CDK5RAP3-218ENST00000580391 TRAPPC3O43617 180 aa15.48■□□□□ 0.07
CDK5RAP3-218ENST00000580391 ENDOD1O94919 500 aa15.48■□□□□ 0.07
CDK5RAP3-218ENST00000580391 FBXO21O94952 628 aa15.48■□□□□ 0.07
CDK5RAP3-218ENST00000580391 UPP2O95045 317 aa15.48■□□□□ 0.07
CDK5RAP3-218ENST00000580391 OAZ2O95190 189 aa15.48■□□□□ 0.07
CDK5RAP3-218ENST00000580391 CLTBP09497 229 aa15.48■□□□□ 0.07
CDK5RAP3-218ENST00000580391 C1QTNF8P60827 252 aa15.48■□□□□ 0.07
CDK5RAP3-218ENST00000580391 PTK6Q13882 451 aa15.48■□□□□ 0.07
CDK5RAP3-218ENST00000580391 MAPRE1Q15691 268 aaKnown RBP15.48■□□□□ 0.07
CDK5RAP3-218ENST00000580391 SLC39A12Q504Y0 691 aa15.48■□□□□ 0.07
CDK5RAP3-218ENST00000580391 VARS2Q5ST30 1063 aaKnown RBP15.48■□□□□ 0.07
CDK5RAP3-218ENST00000580391 SYPL2Q5VXT5 272 aa15.48■□□□□ 0.07
CDK5RAP3-218ENST00000580391 TMEM173Q86WV6 379 aaPredicted RBP15.48■□□□□ 0.07
CDK5RAP3-218ENST00000580391 KRT222Q8N1A0 295 aa15.48■□□□□ 0.07
CDK5RAP3-218ENST00000580391 CCDC185Q8N715 623 aa15.48■□□□□ 0.07
CDK5RAP3-218ENST00000580391 ATL2Q8NHH9 583 aa15.48■□□□□ 0.07
CDK5RAP3-218ENST00000580391 GRK7Q8WTQ7 553 aa15.48■□□□□ 0.07
CDK5RAP3-218ENST00000580391 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.48■□□□□ 0.074e-10■□□□□ 9.4
CDK5RAP3-218ENST00000580391 MRPL9Q9BYD2 267 aaKnown RBP15.48■□□□□ 0.07
CDK5RAP3-218ENST00000580391 ZCWPW1Q9H0M4 648 aa15.48■□□□□ 0.07
CDK5RAP3-218ENST00000580391 PCDH18Q9HCL0 1135 aa15.48■□□□□ 0.07
CDK5RAP3-218ENST00000580391 SYN3O14994 580 aa15.47■□□□□ 0.07
CDK5RAP3-218ENST00000580391 MDM4O15151 490 aa15.47■□□□□ 0.07
CDK5RAP3-218ENST00000580391 GAS8O95995 478 aa15.47■□□□□ 0.07
CDK5RAP3-218ENST00000580391 FYNP06241 537 aa15.47■□□□□ 0.07
CDK5RAP3-218ENST00000580391 OTUD4Q01804 1114 aaKnown RBP15.47■□□□□ 0.07
CDK5RAP3-218ENST00000580391 KRT81Q14533 505 aa15.47■□□□□ 0.07
CDK5RAP3-218ENST00000580391 SLC25A52Q3SY17 297 aa15.47■□□□□ 0.07
CDK5RAP3-218ENST00000580391 GREB1Q4ZG55 1949 aa15.47■□□□□ 0.07
CDK5RAP3-218ENST00000580391 FAM171A1Q5VUB5 890 aa15.47■□□□□ 0.07
CDK5RAP3-218ENST00000580391 STRADAQ7RTN6 431 aa15.47■□□□□ 0.07
CDK5RAP3-218ENST00000580391 PRUNE1Q86TP1 453 aa15.47■□□□□ 0.07
CDK5RAP3-218ENST00000580391 FAM131BQ86XD5 332 aa15.47■□□□□ 0.07
CDK5RAP3-218ENST00000580391 CEP57Q86XR8 500 aa15.47■□□□□ 0.07
CDK5RAP3-218ENST00000580391 SPATA2LQ8IUW3 424 aaPredicted RBP15.47■□□□□ 0.07
CDK5RAP3-218ENST00000580391 FBXO25Q8TCJ0 367 aa15.47■□□□□ 0.07
CDK5RAP3-218ENST00000580391 UBXN6Q9BZV1 441 aa15.47■□□□□ 0.07
CDK5RAP3-218ENST00000580391 C11orf49Q9H6J7 331 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms