RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 KRT10P13645 584 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 HNF1BP35680 557 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 TFAMQ00059 246 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 CYP27A1Q02318 531 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 TAF10Q12962 218 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 TARDBPQ13148 414 aaKnown RBP eCLIP14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 LY6DQ14210 128 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 SCARA3Q6AZY7 606 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 C4orf50Q6ZRC1 276 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 DDX42Q86XP3 938 aaKnown RBP eCLIP14.06□□□□□ -0.161e-11■□□□□ 8.7
CDK5RAP3-213ENST00000579605 BBS7Q8IWZ6 715 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 KIAA1958Q8N8K9 716 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 IGSF22Q8N9C0 903 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 ENGASEQ8NFI3 743 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 MYLPFQ96A32 169 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 NAF1Q96HR8 494 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 FUBP3Q96I24 572 aaKnown RBP eCLIP14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 SPATA17Q96L03 361 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 GABRG3Q99928 467 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 RAB34Q9BZG1 259 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 SPHK2Q9NRA0 654 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 FTSJ1Q9UET6 329 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 SNX9Q9Y5X1 595 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 SLCO1B1Q9Y6L6 691 aa14.06□□□□□ -0.16
CDK5RAP3-213ENST00000579605 PRRT4C9JH25 899 aa14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 SLC28A2O43868 658 aa14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 OAS1P00973 400 aaKnown RBP14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 PIGRP01833 764 aa14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 ITGB3P05106 788 aa14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 IRF1P10914 325 aa14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 PLCG1P19174 1290 aa14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 PCSK1P29120 753 aa14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 PNPLA4P41247 253 aa14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 MAGEA11P43364 429 aa14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 TLE3Q04726 772 aa14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 ORC2Q13416 577 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 FAM124AQ86V42 546 aa14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 ADGRF2Q8IZF7 708 aa14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 TMEM86AQ8N2M4 240 aa14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 MYCT1Q8N699 235 aa14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 SYT2Q8N9I0 419 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 CADM4Q8NFZ8 388 aa14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 FGF11Q92914 225 aa14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 FAM84AQ96KN4 292 aa14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 ITM2CQ9NQX7 267 aa14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 PPP4R2Q9NY27 417 aa14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 AGO2Q9UKV8 859 aaKnown RBP14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 ANK1P16157 1881 aa14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 SCN1AP35498 2009 aa14.05□□□□□ -0.16
CDK5RAP3-213ENST00000579605 CBX4O00257 560 aa14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 TRIM66O15016 1216 aa14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 OLFM2O95897 454 aa14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 KRT19P08727 400 aa14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 PDGFRBP09619 1106 aa14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 PLA2G4BP0C869 781 aa14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 LMO2P25791 158 aa14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 PPP3CCP48454 512 aa14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 LHX1P48742 406 aa14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 SRSF1Q07955 248 aaKnown RBP eCLIP14.04□□□□□ -0.164e-7■■□□□ 12.9
CDK5RAP3-213ENST00000579605 KCNH2Q12809 1159 aa14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 FUT11Q495W5 492 aa14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 TDRD10Q5VZ19 366 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 FAM171BQ6P995 826 aa14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 LAYNQ6UX15 382 aa14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 USP49Q70CQ1 688 aa14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 CACUL1Q86Y37 369 aa14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 SPACA3Q8IXA5 215 aa14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 CSGALNACT2Q8N6G5 542 aa14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 WBP2Q969T9 261 aa14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 TMEM176AQ96HP8 235 aa14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 ZFRQ96KR1 1074 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 MMTAG2Q9BU76 263 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 ZHX3Q9H4I2 956 aa14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 EHD2Q9NZN4 543 aa14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 ANKRD6Q9Y2G4 727 aa14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 NFE2L3Q9Y4A8 694 aa14.04□□□□□ -0.16
CDK5RAP3-213ENST00000579605 NEDD8-MDP1E9PL57 170 aa14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 F8VP50 259 aa14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 H0Y8X5 98 aa14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 IL12RB1P42701 662 aa14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 TPMTP51580 245 aa14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 AFF3P51826 1226 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 SLC12A3P55017 1021 aa14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 ST3GAL1Q11201 340 aa14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 DNAJC3Q13217 504 aa14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 GNL2Q13823 731 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 DHX8Q14562 1220 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 STARD3Q14849 445 aa14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 IL17AQ16552 155 aa14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 ARSHQ5FYA8 562 aa14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 ARHGAP40Q5TG30 622 aa14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 VSTM1Q6UX27 236 aa14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 TPGS1Q6ZTW0 290 aa14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 KRI1Q8N9T8 703 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 SNIP1Q8TAD8 396 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 OTUB2Q96DC9 234 aa14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 C8orf76Q96K31 380 aa14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 XPO6Q96QU8 1125 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 SYT15Q9BQS2 421 aa14.03□□□□□ -0.16
CDK5RAP3-213ENST00000579605 TTLL2Q9BWV7 592 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms