RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, human

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCE1-215	ENST00000578995	NFE2L3	Q9Y4A8	694 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	NUB1	Q9Y5A7	615 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	BDP1	A6H8Y1	2624 aa		4.07	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TRIO	O75962	3097 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	MUC3A	Q02505	3323 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SF3B1	O75533	1304 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	WDR27	A2RRH5	827 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	KPNA7	A9QM74	516 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SYN3	O14994	580 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	EPHB6	O15197	1021 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TEX28	O15482	410 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	LINC01565	O15544	149 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	CLASP2	O75122	1294 aa	Known RBP	4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TBX10	O75333	385 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TACC1	O75410	805 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	B3GAT3	O94766	335 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	NOL4	O94818	638 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ABLIM3	O94929	683 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	C1R	P00736	705 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ALDH2	P05091	517 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	CNP	P09543	421 aa	Known RBP	4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	DLAT	P10515	647 aa	Known RBP	4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TYMP	P19971	482 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ACO1	P21399	889 aa	Known RBP	4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	WARS	P23381	471 aa	Known RBP	4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	RPL13	P26373	211 aa	Known RBP	4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	EEF1G	P26641	437 aa	Known RBP	4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	GTF2F1	P35269	517 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	MATR3	P43243	847 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ALDH7A1	P49419	539 aa	Known RBP	4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	GLUD2	P49448	558 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TAF6	P49848	677 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	MXI1	P50539	228 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	CLCN4	P51793	760 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ZNF132	P52740	706 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	AP3M2	P53677	418 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TFAM	Q00059	246 aa	Known RBP	4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	APBA1	Q02410	837 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	RNASEL	Q05823	741 aa	Known RBP	4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	DLX2	Q07687	328 aa	Predicted RBP	4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	INCA1	Q0VD86	236 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	HYAL1	Q12794	435 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	STIM1	Q13586	685 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	KRT31	Q15323	416 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	MAN2A1	Q16706	1144 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	DUSP6	Q16828	381 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	HSP90AA4P	Q58FG1	418 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TCP11X2	Q5H9J9	407 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	PHLDB3	Q6NSJ2	640 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SASS6	Q6UVJ0	657 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	PRSS55	Q6UWB4	352 aa	Predicted RBP	4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	LRSAM1	Q6UWE0	723 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TMEM184A	Q6ZMB5	413 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	PAQR9	Q6ZVX9	377 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	LUZP1	Q86V48	1076 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	LRRTM3	Q86VH5	581 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ARHGEF19	Q8IW93	802 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	VPS52	Q8N1B4	723 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	PDCL2	Q8N4E4	241 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	DEFB123	Q8N688	67 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	AOPEP	Q8N6M6	819 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SPATA18	Q8TC71	538 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	KAT5	Q92993	513 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TMEM169	Q96HH4	297 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	MSLNL	Q96KJ4	702 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	KREMEN1	Q96MU8	473 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	FAM161B	Q96MY7	647 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	KLHL5	Q96PQ7	755 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TWNK	Q96RR1	684 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TMEM209	Q96SK2	561 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TSG101	Q99816	390 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ARID3A	Q99856	593 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ZSWIM1	Q9BR11	485 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	MRPL45	Q9BRJ2	306 aa	Known RBP	4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	PI4K2A	Q9BTU6	479 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	COLEC11	Q9BWP8	271 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	NAA15	Q9BXJ9	866 aa	Known RBP	4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	IRF2BPL	Q9H1B7	796 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	GAN	Q9H2C0	597 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SMYD3	Q9H7B4	428 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	METTL14	Q9HCE5	456 aa	Known RBP	4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	CRTAC1	Q9NQ79	661 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	PRDM7	Q9NQW5	492 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TLR9	Q9NR96	1032 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	TMLHE	Q9NVH6	421 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	CLEC1B	Q9P126	229 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	FNIP2	Q9P278	1114 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	ARMCX3	Q9UH62	379 aa	Predicted RBP	4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	AGAP1	Q9UPQ3	857 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	CNTN6	Q9UQ52	1028 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	SIK3	Q9Y2K2	1263 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	FRMD4B	Q9Y2L6	1034 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	PCDHB12	Q9Y5F1	795 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	BACE2	Q9Y5Z0	518 aa		4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	MUC22	E2RYF6	1773 aa	Predicted RBP	4.06	□□□□□ -1.76
SMARCE1-215	ENST00000578995	EML5	Q05BV3	1969 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	VCAN	P13611	3396 aa		4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	GTPBP10	A4D1E9	387 aa	Known RBP	4.05	□□□□□ -1.76
SMARCE1-215	ENST00000578995	CARNS1	A5YM72	827 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms