RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 MAP3K7CLP57077 242 aa9.47□□□□□ -0.89
GGA3-207ENST00000578896 ELF2Q15723 593 aa9.47□□□□□ -0.89
GGA3-207ENST00000578896 CRY1Q16526 586 aa9.47□□□□□ -0.89
GGA3-207ENST00000578896 USP39Q53GS9 565 aaKnown RBP9.47□□□□□ -0.89
GGA3-207ENST00000578896 HECTD3Q5T447 861 aa9.47□□□□□ -0.89
GGA3-207ENST00000578896 RNF43Q68DV7 783 aa9.47□□□□□ -0.89
GGA3-207ENST00000578896 SV2AQ7L0J3 742 aa9.47□□□□□ -0.89
GGA3-207ENST00000578896 GPRIN1Q7Z2K8 1008 aa9.47□□□□□ -0.89
GGA3-207ENST00000578896 TMEM25Q86YD3 366 aa9.47□□□□□ -0.89
GGA3-207ENST00000578896 DEFB119Q8N690 84 aa9.47□□□□□ -0.89
GGA3-207ENST00000578896 IL17RCQ8NAC3 791 aa9.47□□□□□ -0.89
GGA3-207ENST00000578896 SLC2A14Q8TDB8 520 aa9.47□□□□□ -0.89
GGA3-207ENST00000578896 CEP295NLQ96MC4 621 aa9.47□□□□□ -0.89
GGA3-207ENST00000578896 MMRN2Q9H8L6 949 aa9.47□□□□□ -0.89
GGA3-207ENST00000578896 VPS45Q9NRW7 570 aa9.47□□□□□ -0.89
GGA3-207ENST00000578896 EHD2Q9NZN4 543 aa9.47□□□□□ -0.89
GGA3-207ENST00000578896 EBF1Q9UH73 591 aa9.47□□□□□ -0.89
GGA3-207ENST00000578896 MMP17Q9ULZ9 603 aa9.47□□□□□ -0.89
GGA3-207ENST00000578896 SH3BP1Q9Y3L3 701 aa9.47□□□□□ -0.89
GGA3-207ENST00000578896 CHD6Q8TD26 2715 aa9.47□□□□□ -0.89
GGA3-207ENST00000578896 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 TBC1D3BA6NDS4 549 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 SLC9A3R1O14745 358 aaPredicted RBP9.46□□□□□ -0.9
GGA3-207ENST00000578896 ADAM23O75077 832 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 ADH1CP00326 375 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 HLA-DRAP01903 254 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 TRIM49P0CI25 452 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 TRIM49CP0CI26 452 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 PDIA4P13667 645 aaKnown RBP9.46□□□□□ -0.9
GGA3-207ENST00000578896 PFKLP17858 780 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 KIR2DL1P43626 348 aaPredicted RBP9.46□□□□□ -0.9
GGA3-207ENST00000578896 ASPAP45381 313 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 CLDN10P78369 228 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 ANO4Q32M45 955 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 ZACNQ401N2 412 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 PMS2CLQ68D20 193 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 RASSF3Q86WH2 238 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 MIB1Q86YT6 1006 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 TMEFF1Q8IYR6 380 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 PGBD3Q8N328 593 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 PHTF2Q8N3S3 785 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 HMGB4Q8WW32 186 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 PIGKQ92643 395 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 SMARCD1Q96GM5 515 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 EDEM2Q9BV94 578 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 NACA2Q9H009 215 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 VRTNQ9H8Y1 702 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 NMUR1Q9HB89 426 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 APOBEC3GQ9HC16 384 aaKnown RBP9.46□□□□□ -0.9
GGA3-207ENST00000578896 DMAP1Q9NPF5 467 aaPredicted RBP9.46□□□□□ -0.9
GGA3-207ENST00000578896 OSER1Q9NX31 292 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 CGNQ9P2M7 1197 aaKnown RBP9.46□□□□□ -0.9
GGA3-207ENST00000578896 CFAP45Q9UL16 551 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 HCN2Q9UL51 889 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 ZDHHC9Q9Y397 364 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 PCDHGA5Q9Y5G8 931 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 ATP8B3O60423 1300 aa9.46□□□□□ -0.9
GGA3-207ENST00000578896 TCRBV21S2A2A0A5A6 115 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 E2F8A0AVK6 867 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 CYP26A1O43174 497 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 TLR5O60602 858 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 TULP3O75386 442 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 KCNK5O95279 499 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 RPN1P04843 607 aaKnown RBP9.45□□□□□ -0.9
GGA3-207ENST00000578896 ZDHHC11BP0C7U3 371 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 CD58P19256 250 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 GRIA2P42262 883 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 PIK3CAP42336 1068 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 PTGER3P43115 390 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 GCLMP48507 274 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 NDUFA8P51970 172 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 LIMK1P53667 647 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 IRX4P78413 519 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 MRPS21P82921 87 aaKnown RBP9.45□□□□□ -0.9
GGA3-207ENST00000578896 GAD2Q05329 585 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 PPP3CAQ08209 521 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 NUMA1Q14980 2115 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 SGSM1Q2NKQ1 1148 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 UAP1L1Q3KQV9 507 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 PSAPL1Q6NUJ1 521 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 TPGS1Q6ZTW0 290 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 SLC9A9Q8IVB4 645 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 ETFBKMTQ8IXQ9 262 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 PDZD8Q8NEN9 1154 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 GOLGA5Q8TBA6 731 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 BHMTQ93088 406 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 EEF2KMTQ96G04 330 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 P2RY11Q96G91 374 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 TNIP3Q96KP6 325 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 CNOT6LQ96LI5 555 aaKnown RBP9.45□□□□□ -0.9
GGA3-207ENST00000578896 ACOX2Q99424 681 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 LSM14BQ9BX40 385 aaKnown RBP9.45□□□□□ -0.9
GGA3-207ENST00000578896 FSCN3Q9NQT6 498 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 IL37Q9NZH6 218 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 BCCIPQ9P287 314 aaKnown RBP eCLIP9.45□□□□□ -0.9
GGA3-207ENST00000578896 TBC1D14Q9P2M4 693 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 MBD1Q9UIS9 605 aaPredicted RBP9.45□□□□□ -0.9
GGA3-207ENST00000578896 ATXN2Q99700 1313 aaKnown RBP9.45□□□□□ -0.9
GGA3-207ENST00000578896 CABIN1Q9Y6J0 2220 aa9.45□□□□□ -0.9
GGA3-207ENST00000578896 ASPMQ8IZT6 3477 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms