RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 FCARP24071 287 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 KPNA1P52294 538 aaPredicted RBP10.75□□□□□ -0.69
SS18-210ENST00000578700 CDR2Q01850 454 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 MYO1EQ12965 1108 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 CCDC6Q16204 474 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 UPP1Q16831 310 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 ZNF667Q5HYK9 610 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 PRSS36Q5K4E3 855 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 IL31Q6EBC2 164 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 RTL10Q7L3V2 364 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 YAF2Q8IY57 180 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 SYCE1Q8N0S2 351 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 TTC39CQ8N584 583 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 CEP112Q8N8E3 955 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 C3orf58Q8NDZ4 430 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 CSGALNACT1Q8TDX6 532 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 KAT5Q92993 513 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 TATDN2Q93075 761 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 KREMEN1Q96MU8 473 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 ASB16Q96NS5 453 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 IRX2Q9BZI1 471 aaPredicted RBP10.75□□□□□ -0.69
SS18-210ENST00000578700 L2HGDHQ9H9P8 463 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 TRIM10Q9UDY6 481 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 ITGA11Q9UKX5 1188 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 C2CD2Q9Y426 696 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 TICRRQ7Z2Z1 1910 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 PTPRJQ12913 1337 aa10.75□□□□□ -0.69
SS18-210ENST00000578700 FAM208BQ5VWN6 2430 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 A0A0A6YYK5 440 aaPredicted RBP10.74□□□□□ -0.69
SS18-210ENST00000578700 A0A0U1RQJ8 604 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 SMIM28A0A1B0GU29 152 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 ARHGEF37A1IGU5 675 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 ANKRD62A6NC57 917 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 RCCD1A6NED2 376 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 HEPACAM2A8MVW5 462 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 H7C4K7 107 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 TMEM189-UBE2V1I3L0A0 370 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 PODXLO00592 558 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 DYNC1I1O14576 645 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 RTN2O75298 545 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 MOCS3O95396 460 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 TMEM253P0C7T8 217 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 CHRNB1P11230 501 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 GZMAP12544 262 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 ATF2P15336 505 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 SOX9P48436 509 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 WNT7BP56706 349 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 MYL6P60660 151 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 RBP5P82980 135 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 CKAP4Q07065 602 aaKnown RBP10.74□□□□□ -0.69
SS18-210ENST00000578700 TWF1Q12792 350 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 GAS6Q14393 721 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 CSRP2Q16527 193 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 WHAMMP3Q1A5X7 153 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 AASDHQ4L235 1098 aaPredicted RBP10.74□□□□□ -0.69
SS18-210ENST00000578700 CTXN3Q4LDR2 81 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 JADE1Q6IE81 842 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 TRIM72Q6ZMU5 477 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 RHOT2Q8IXI1 618 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 ZNF687Q8N1G0 1237 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 CEP120Q8N960 986 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 BEST2Q8NFU1 509 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 SLC30A5Q8TAD4 765 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 ZSCAN18Q8TBC5 510 aaPredicted RBP10.74□□□□□ -0.69
SS18-210ENST00000578700 EPS8L1Q8TE68 723 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 SMARCD2Q92925 531 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 TRIM11Q96F44 468 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 KIF12Q96FN5 646 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 UROC1Q96N76 676 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 PPP1R10Q96QC0 940 aaKnown RBP10.74□□□□□ -0.69
SS18-210ENST00000578700 AVENQ9NQS1 362 aaPredicted RBP10.74□□□□□ -0.69
SS18-210ENST00000578700 CDC23Q9UJX2 597 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 NUB1Q9Y5A7 615 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 INSL5Q9Y5Q6 135 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.74□□□□□ -0.69
SS18-210ENST00000578700 SAR1BQ9Y6B6 198 aa10.74□□□□□ -0.69
SS18-210ENST00000578700 COL4A2P08572 1712 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 SLC38A8A6NNN8 435 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 TMCO5BA8MYB1 307 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 BUB1O43683 1085 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 ABLIM3O94929 683 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 ITGB3P05106 788 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 NFICP08651 508 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 HOXC13P31276 330 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 GALCP54803 685 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 TNNC1P63316 161 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 SOX4Q06945 474 aaPredicted RBP10.73□□□□□ -0.69
SS18-210ENST00000578700 TEAD2Q15562 447 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 SLC10A6Q3KNW5 377 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 N4BP2L1Q5TBK1 243 aaPredicted RBP10.73□□□□□ -0.69
SS18-210ENST00000578700 TAF3Q5VWG9 929 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 SLC8B1Q6J4K2 584 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 TMEM270Q6UE05 265 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 SLC47A2Q86VL8 602 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 RBBP8NLQ8NC74 664 aaPredicted RBP10.73□□□□□ -0.69
SS18-210ENST00000578700 DEPDC1BQ8WUY9 529 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 UBE2Q2Q8WVN8 375 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 FAM124BQ9H5Z6 455 aaPredicted RBP10.73□□□□□ -0.69
SS18-210ENST00000578700 DPP3Q9NY33 737 aa10.73□□□□□ -0.69
SS18-210ENST00000578700 NOCTQ9UK39 431 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms