RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 TLR5O60602 858 aa12.11□□□□□ -0.47
ERBB2-208ENST00000578630 OAS1P00973 400 aaKnown RBP12.11□□□□□ -0.47
ERBB2-208ENST00000578630 FCARP24071 287 aa12.11□□□□□ -0.47
ERBB2-208ENST00000578630 RPL34P49207 117 aaKnown RBP12.11□□□□□ -0.47
ERBB2-208ENST00000578630 YWHAGP61981 247 aaKnown RBP eCLIP12.11□□□□□ -0.47
ERBB2-208ENST00000578630 GPC5P78333 572 aa12.11□□□□□ -0.47
ERBB2-208ENST00000578630 ARID5AQ03989 594 aa12.11□□□□□ -0.47
ERBB2-208ENST00000578630 GOLGA8FQ08AF8 430 aa12.11□□□□□ -0.47
ERBB2-208ENST00000578630 GOLGA8DPQ0D2H9 430 aa12.11□□□□□ -0.47
ERBB2-208ENST00000578630 ARHGAP29Q52LW3 1261 aa12.11□□□□□ -0.47
ERBB2-208ENST00000578630 TAF3Q5VWG9 929 aa12.11□□□□□ -0.47
ERBB2-208ENST00000578630 KLHDC10Q6PID8 442 aa12.11□□□□□ -0.47
ERBB2-208ENST00000578630 RSRC2Q7L4I2 434 aaKnown RBP12.11□□□□□ -0.47
ERBB2-208ENST00000578630 TMEM110Q86TL2 294 aa12.11□□□□□ -0.47
ERBB2-208ENST00000578630 DDX42Q86XP3 938 aaKnown RBP eCLIP12.11□□□□□ -0.47
ERBB2-208ENST00000578630 MSANTD4Q8NCY6 345 aa12.11□□□□□ -0.47
ERBB2-208ENST00000578630 RNF139Q8WU17 664 aa12.11□□□□□ -0.47
ERBB2-208ENST00000578630 IRF7Q92985 503 aa12.11□□□□□ -0.47
ERBB2-208ENST00000578630 USP13Q92995 863 aaPredicted RBP12.11□□□□□ -0.47
ERBB2-208ENST00000578630 PPP1R13BQ96KQ4 1090 aa12.11□□□□□ -0.47
ERBB2-208ENST00000578630 SLC4A5Q9BY07 1137 aa12.11□□□□□ -0.47
ERBB2-208ENST00000578630 PLA2G2FQ9BZM2 168 aa12.11□□□□□ -0.47
ERBB2-208ENST00000578630 RNF38Q9H0F5 515 aa12.11□□□□□ -0.47
ERBB2-208ENST00000578630 SYNCQ9H7C4 482 aa12.11□□□□□ -0.47
ERBB2-208ENST00000578630 BRD9Q9H8M2 597 aa12.11□□□□□ -0.47
ERBB2-208ENST00000578630 ABCC13Q9NSE7 274 aa12.11□□□□□ -0.47
ERBB2-208ENST00000578630 WNT16Q9UBV4 365 aa12.11□□□□□ -0.47
ERBB2-208ENST00000578630 DNMT3LQ9UJW3 386 aa12.11□□□□□ -0.47
ERBB2-208ENST00000578630 PTPRDP23468 1912 aa12.11□□□□□ -0.47
ERBB2-208ENST00000578630 TTC28Q96AY4 2481 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 A0A1W2PQJ5 194 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 PIK3R2O00459 728 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 CHADO15335 359 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 COCHO43405 550 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 LSM8O95777 96 aaKnown RBP12.1□□□□□ -0.47
ERBB2-208ENST00000578630 CFHP08603 1231 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 TPM1P09493 284 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 TCF3P15923 654 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 GDI1P31150 447 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 PBX1P40424 430 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 CDR2Q01850 454 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 SIGLEC14Q08ET2 396 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 C10orf120Q5SQS8 335 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 SFMBT2Q5VUG0 894 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 BSPRYQ5W0U4 402 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 VITQ6UXI7 678 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 TRIM72Q6ZMU5 477 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 SCD5Q86SK9 330 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 NOP9Q86U38 636 aaKnown RBP12.1□□□□□ -0.47
ERBB2-208ENST00000578630 ERICH1Q86X53 443 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 PASD1Q8IV76 773 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 SCUBE3Q8IX30 993 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 WDTC1Q8N5D0 677 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 KIAA1958Q8N8K9 716 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 TTC16Q8NEE8 873 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 EPS8L1Q8TE68 723 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 IPO4Q8TEX9 1081 aaKnown RBP12.1□□□□□ -0.47
ERBB2-208ENST00000578630 CPLX3Q8WVH0 158 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 DDX1Q92499 740 aaKnown RBP12.1□□□□□ -0.47
ERBB2-208ENST00000578630 SLC22A12Q96S37 553 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 TRIM62Q9BVG3 475 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 TRIM5Q9C035 493 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 SMG9Q9H0W8 520 aaKnown RBP12.1□□□□□ -0.47
ERBB2-208ENST00000578630 RBSNQ9H1K0 784 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 CCSER2Q9H7U1 834 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 NMUR1Q9HB89 426 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 SLC2A4RGQ9NR83 387 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 OLA1Q9NTK5 396 aaKnown RBP12.1□□□□□ -0.47
ERBB2-208ENST00000578630 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.1□□□□□ -0.47
ERBB2-208ENST00000578630 FBXL21Q9UKT6 434 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 STRIP2Q9ULQ0 834 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 LUC7L2Q9Y383 392 aaKnown RBP12.1□□□□□ -0.47
ERBB2-208ENST00000578630 CPQQ9Y646 472 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 C5orf42Q9H799 3197 aa12.1□□□□□ -0.47
ERBB2-208ENST00000578630 DENND4AQ7Z401 1863 aa12.09□□□□□ -0.47
ERBB2-208ENST00000578630 LEFTY2O00292 366 aa12.09□□□□□ -0.47
ERBB2-208ENST00000578630 SLC9A3R1O14745 358 aaPredicted RBP12.09□□□□□ -0.47
ERBB2-208ENST00000578630 PRAMEF12O95522 483 aa12.09□□□□□ -0.47
ERBB2-208ENST00000578630 OLFM2O95897 454 aa12.09□□□□□ -0.47
ERBB2-208ENST00000578630 MMEP08473 750 aa12.09□□□□□ -0.47
ERBB2-208ENST00000578630 TNFAIP3P21580 790 aa12.09□□□□□ -0.47
ERBB2-208ENST00000578630 CDH5P33151 784 aaPredicted RBP12.09□□□□□ -0.47
ERBB2-208ENST00000578630 DAOAP59103 153 aa12.09□□□□□ -0.47
ERBB2-208ENST00000578630 COG7P83436 770 aa12.09□□□□□ -0.47
ERBB2-208ENST00000578630 ZBED6P86452 979 aa12.09□□□□□ -0.47
ERBB2-208ENST00000578630 FCHO2Q0JRZ9 810 aa12.09□□□□□ -0.47
ERBB2-208ENST00000578630 PDCLQ13371 301 aa12.09□□□□□ -0.47
ERBB2-208ENST00000578630 GRM2Q14416 872 aa12.09□□□□□ -0.47
ERBB2-208ENST00000578630 ASIC2Q16515 512 aa12.09□□□□□ -0.47
ERBB2-208ENST00000578630 TSR1Q2NL82 804 aaKnown RBP12.09□□□□□ -0.47
ERBB2-208ENST00000578630 EFHC1Q5JVL4 640 aa12.09□□□□□ -0.47
ERBB2-208ENST00000578630 IRF2BP2Q7Z5L9 587 aa12.09□□□□□ -0.47
ERBB2-208ENST00000578630 ZDHHC17Q8IUH5 632 aa12.09□□□□□ -0.47
ERBB2-208ENST00000578630 CSGALNACT1Q8TDX6 532 aa12.09□□□□□ -0.47
ERBB2-208ENST00000578630 SH3RF2Q8TEC5 729 aa12.09□□□□□ -0.47
ERBB2-208ENST00000578630 BAP1Q92560 729 aa12.09□□□□□ -0.47
ERBB2-208ENST00000578630 NDRG1Q92597 394 aaKnown RBP12.09□□□□□ -0.47
ERBB2-208ENST00000578630 C18orf8Q96DM3 657 aa12.09□□□□□ -0.47
ERBB2-208ENST00000578630 SHDQ96IW2 340 aa12.09□□□□□ -0.47
ERBB2-208ENST00000578630 AGPAT1Q99943 283 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms