RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 ZNF276Q8N554 614 aa14.39□□□□□ -0.11
CSNK1D-208ENST00000578501 ATP2A3Q93084 1043 aa14.39□□□□□ -0.11
CSNK1D-208ENST00000578501 FAM81BQ96LP2 452 aa14.39□□□□□ -0.11
CSNK1D-208ENST00000578501 IER2Q9BTL4 223 aa14.39□□□□□ -0.11
CSNK1D-208ENST00000578501 INTS2Q9H0H0 1204 aaKnown RBP14.39□□□□□ -0.11
CSNK1D-208ENST00000578501 EBF3Q9H4W6 596 aa14.39□□□□□ -0.11
CSNK1D-208ENST00000578501 HPS4Q9NQG7 708 aa14.39□□□□□ -0.11
CSNK1D-208ENST00000578501 DUS2Q9NX74 493 aaKnown RBP14.39□□□□□ -0.11
CSNK1D-208ENST00000578501 CNTN6Q9UQ52 1028 aa14.39□□□□□ -0.11
CSNK1D-208ENST00000578501 PCDHB4Q9Y5E5 795 aa14.39□□□□□ -0.11
CSNK1D-208ENST00000578501 PCDHGA2Q9Y5H1 932 aa14.39□□□□□ -0.11
CSNK1D-208ENST00000578501 TICRRQ7Z2Z1 1910 aa14.39□□□□□ -0.11
CSNK1D-208ENST00000578501 LAMTOR5O43504 91 aa14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 MTIF2P46199 727 aaKnown RBP14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 PSEN1P49768 467 aa14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 ZNF132P52740 706 aa14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 BCAT1P54687 386 aa14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 STILQ15468 1287 aa14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 MAN2A1Q16706 1144 aa14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 RAB41Q5JT25 222 aa14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 TRIM68Q6AZZ1 485 aa14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 KLHDC10Q6PID8 442 aa14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 MAMSTRQ6ZN01 415 aa14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 GBP6Q6ZN66 633 aa14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 RRAGAQ7L523 313 aa14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 TTC30AQ86WT1 665 aa14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 CREBRFQ8IUR6 639 aa14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 ARHGEF19Q8IW93 802 aa14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 ENOX1Q8TC92 643 aaKnown RBP14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 KAT5Q92993 513 aa14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 KREMEN1Q96MU8 473 aa14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 CYLDQ9NQC7 956 aa14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 TSPAN16Q9UKR8 245 aa14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 CPQQ9Y646 472 aa14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 COL4A3Q01955 1670 aa14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 ACACBO00763 2458 aa14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 PATJQ8NI35 1801 aa14.38□□□□□ -0.11
CSNK1D-208ENST00000578501 KMT2BQ9UMN6 2715 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 OTOL1A6NHN0 477 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 RNF225M0QZC1 329 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 O00370 1275 aa14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 SLC9A3R1O14745 358 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 XPO1O14980 1071 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 CYP26A1O43174 497 aa14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 TLR5O60602 858 aa14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 MBL2P11226 248 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 CHRNB1P11230 501 aa14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 ARSAP15289 507 aa14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 CD19P15391 556 aa14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 SOX9P48436 509 aa14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 IFNAR2P48551 515 aa14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 PGFP49763 221 aa14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 BST2Q10589 180 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 CNGA2Q16280 664 aa14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 EXOC3L4Q17RC7 722 aa14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 GOLGA7BQ2TAP0 167 aa14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 EML3Q32P44 896 aa14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 PKDCCQ504Y2 493 aa14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 TRIM65Q6PJ69 517 aa14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 LCLAT1Q6UWP7 414 aa14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 PIGZQ86VD9 579 aa14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 CPA6Q8N4T0 437 aa14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 ZFRQ96KR1 1074 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 CCSER2Q9H7U1 834 aa14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 ECT2Q9H8V3 914 aa14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 SPATA6Q9NWH7 488 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 HESX1Q9UBX0 185 aa14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 NDRG2Q9UN36 371 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 FANCMQ8IYD8 2048 aa14.37□□□□□ -0.11
CSNK1D-208ENST00000578501 E2F8A0AVK6 867 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 TRDMT1O14717 391 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 SETSIPP0DME0 302 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 PLA2G4AP47712 749 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 MFAP3P55082 362 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 NR1H3Q13133 447 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 LRRC32Q14392 662 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 VWA3BQ502W6 1294 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 DGKKQ5KSL6 1271 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 CCDC183Q5T5S1 534 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 PM20D1Q6GTS8 502 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 TXNDC11Q6PKC3 985 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 TADA2BQ86TJ2 420 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 MAML2Q8IZL2 1156 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 ARHGAP18Q8N392 663 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 SYNPOQ8N3V7 929 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 RBBP8NLQ8NC74 664 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 TTC8Q8TAM2 541 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 KCTD13Q8WZ19 329 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 TFAP2BQ92481 460 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 EXOC4Q96A65 974 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 CDK5RAP1Q96SZ6 601 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 TUBGCP2Q9BSJ2 902 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 CRACR2AQ9BSW2 395 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 CHRDQ9H2X0 955 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 NDST4Q9H3R1 872 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 LMAN1LQ9HAT1 526 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 UBE2TQ9NPD8 197 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 OSER1Q9NX31 292 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 SMPD4Q9NXE4 827 aa14.36□□□□□ -0.11
CSNK1D-208ENST00000578501 CLIC5Q9NZA1 410 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms