RNA–Protein interactions for RNA: ENST00000578137.5

DDX42-206, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 857 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-206ENST00000578137 TRIM55Q9BYV6 548 aa4.88□□□□□ -1.63
DDX42-206ENST00000578137 IPPKQ9H8X2 491 aa4.88□□□□□ -1.63
DDX42-206ENST00000578137 RXFP3Q9NSD7 469 aa4.88□□□□□ -1.63
DDX42-206ENST00000578137 WNT16Q9UBV4 365 aa4.88□□□□□ -1.63
DDX42-206ENST00000578137 SWAP70Q9UH65 585 aa4.88□□□□□ -1.63
DDX42-206ENST00000578137 PCDHGA2Q9Y5H1 932 aa4.88□□□□□ -1.63
DDX42-206ENST00000578137 MYO9AB2RTY4 2548 aa4.88□□□□□ -1.63
DDX42-206ENST00000578137 MYH15Q9Y2K3 1946 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 NBPF19A0A087WUL8 3843 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 TRAV20A0A0B4J274 112 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 IDH1O75874 414 aaKnown RBP4.87□□□□□ -1.63
DDX42-206ENST00000578137 C1QL1O75973 258 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 ABHD16AO95870 558 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 C4BPAP04003 597 aaKnown RBP4.87□□□□□ -1.63
DDX42-206ENST00000578137 PABPC1P11940 636 aaKnown RBP4.87□□□□□ -1.63
DDX42-206ENST00000578137 TDGF1P13385 188 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 HOXB8P17481 243 aaPredicted RBP4.87□□□□□ -1.63
DDX42-206ENST00000578137 RBM25P49756 843 aaKnown RBP4.87□□□□□ -1.63
DDX42-206ENST00000578137 CSTF1Q05048 431 aaKnown RBP4.87□□□□□ -1.63
DDX42-206ENST00000578137 LPAL2Q16609 132 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 LY6KQ17RY6 165 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 KIAA0753Q2KHM9 967 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 BRDTQ58F21 947 aaPredicted RBP4.87□□□□□ -1.63
DDX42-206ENST00000578137 GORABQ5T7V8 394 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 HECTD2Q5U5R9 776 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 PLPP4Q5VZY2 271 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 NAIF1Q69YI7 327 aaPredicted RBP4.87□□□□□ -1.63
DDX42-206ENST00000578137 KIAA1841Q6NSI8 718 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 TSSK4Q6SA08 328 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 KCNT2Q6UVM3 1135 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 CELF2-AS1Q8N7Q2 184 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 PJA1Q8NG27 643 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 SCFD2Q8WU76 684 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 CCDC17Q96LX7 622 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 SLC6A15Q9H2J7 730 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 SEMA4GQ9NTN9 838 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 FEM1BQ9UK73 627 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 FBXO4Q9UKT5 387 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 MTF2Q9Y483 593 aaPredicted RBP4.87□□□□□ -1.63
DDX42-206ENST00000578137 ATP23Q9Y6H3 246 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 RAD50Q92878 1312 aa4.87□□□□□ -1.63
DDX42-206ENST00000578137 DOCK5Q9H7D0 1870 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 UBR5O95071 2799 aaPredicted RBP4.86□□□□□ -1.63
DDX42-206ENST00000578137 TMEM8BA6NDV4 472 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 GOLGA6L6A8MZA4 724 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 TBC1D4O60343 1298 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 IGSF3O75054 1194 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 FAM20BO75063 409 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 FGF18O76093 207 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 KCNK5O95279 499 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 CHRNA1P02708 482 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 PRB1P04280 392 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 UBTFL1P0CB47 393 aaPredicted RBP4.86□□□□□ -1.63
DDX42-206ENST00000578137 MC4RP32245 332 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 MTHFRP42898 656 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 CLK3P49761 638 aaKnown RBP4.86□□□□□ -1.63
DDX42-206ENST00000578137 SESN2P58004 480 aaPredicted RBP4.86□□□□□ -1.63
DDX42-206ENST00000578137 ATP8B2P98198 1209 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 ITIH3Q06033 890 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 LPIN1Q14693 890 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 ELAVL1Q15717 326 aaKnown RBP4.86□□□□□ -1.63
DDX42-206ENST00000578137 NTRK3Q16288 839 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 TKFCQ3LXA3 575 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 TTC39AQ5SRH9 613 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 RARS2Q5T160 578 aaKnown RBP4.86□□□□□ -1.63
DDX42-206ENST00000578137 C12orf60Q5U649 245 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 C19orf48Q6RUI8 117 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 CHST3Q7LGC8 479 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 CERS3Q8IU89 383 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 WDR48Q8TAF3 677 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 APBB2Q92870 758 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 ZNF669Q96BR6 464 aaPredicted RBP4.86□□□□□ -1.63
DDX42-206ENST00000578137 IPO9Q96P70 1041 aaKnown RBP4.86□□□□□ -1.63
DDX42-206ENST00000578137 ZSCAN32Q9NX65 697 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 NYAP2Q9P242 653 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 DBNLQ9UJU6 430 aaKnown RBP4.86□□□□□ -1.63
DDX42-206ENST00000578137 COL12A1Q99715 3063 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 ASXL3Q9C0F0 2248 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 APC2O95996 2303 aa4.86□□□□□ -1.63
DDX42-206ENST00000578137 SDK1Q7Z5N4 2213 aa4.85□□□□□ -1.63
DDX42-206ENST00000578137 LOC102724159A0A0B4J2E5 919 aa4.85□□□□□ -1.63
DDX42-206ENST00000578137 TMEM232C9JQI7 657 aa4.85□□□□□ -1.63
DDX42-206ENST00000578137 MAN2B1O00754 1011 aa4.85□□□□□ -1.63
DDX42-206ENST00000578137 KLF4O43474 513 aa4.85□□□□□ -1.63
DDX42-206ENST00000578137 LRP3O75074 770 aa4.85□□□□□ -1.63
DDX42-206ENST00000578137 CLASP2O75122 1294 aaKnown RBP4.85□□□□□ -1.63
DDX42-206ENST00000578137 APPP05067 770 aa4.85□□□□□ -1.63
DDX42-206ENST00000578137 GHRP10912 638 aa4.85□□□□□ -1.63
DDX42-206ENST00000578137 CASTP20810 708 aaKnown RBP4.85□□□□□ -1.63
DDX42-206ENST00000578137 NR4A1P22736 598 aa4.85□□□□□ -1.63
DDX42-206ENST00000578137 STAT5BP51692 787 aa4.85□□□□□ -1.63
DDX42-206ENST00000578137 UBE3AQ05086 875 aa4.85□□□□□ -1.63
DDX42-206ENST00000578137 MGAT3Q09327 533 aa4.85□□□□□ -1.63
DDX42-206ENST00000578137 MTX1Q13505 466 aa4.85□□□□□ -1.63
DDX42-206ENST00000578137 RAB33AQ14088 237 aa4.85□□□□□ -1.63
DDX42-206ENST00000578137 PWP2Q15269 919 aaKnown RBP4.85□□□□□ -1.63
DDX42-206ENST00000578137 XRRA1Q6P2D8 792 aa4.85□□□□□ -1.63
DDX42-206ENST00000578137 KCNV1Q6PIU1 500 aa4.85□□□□□ -1.63
DDX42-206ENST00000578137 FAM111BQ6SJ93 734 aa4.85□□□□□ -1.63
DDX42-206ENST00000578137 ARHGAP36Q6ZRI8 547 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms