RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 RUNDC1Q96C34 613 aa3.24□□□□□ -1.89
CDH8-204ENST00000577536 VCPIP1Q96JH7 1222 aa3.24□□□□□ -1.89
CDH8-204ENST00000577536 ZBTB45Q96K62 511 aaPredicted RBP3.24□□□□□ -1.89
CDH8-204ENST00000577536 SIGLEC11Q96RL6 698 aa3.24□□□□□ -1.89
CDH8-204ENST00000577536 TMEM60Q9H2L4 133 aa3.24□□□□□ -1.89
CDH8-204ENST00000577536 EBF3Q9H4W6 596 aa3.24□□□□□ -1.89
CDH8-204ENST00000577536 TRIM36Q9NQ86 728 aa3.24□□□□□ -1.89
CDH8-204ENST00000577536 GAR1Q9NY12 217 aaKnown RBP3.24□□□□□ -1.89
CDH8-204ENST00000577536 STK32BQ9NY57 414 aa3.24□□□□□ -1.89
CDH8-204ENST00000577536 PI4KBQ9UBF8 816 aa3.24□□□□□ -1.89
CDH8-204ENST00000577536 H3BNC9 293 aa3.23□□□□□ -1.89
CDH8-204ENST00000577536 H7C4K7 107 aa3.23□□□□□ -1.89
CDH8-204ENST00000577536 PYCARD-AS1I3L0S3 204 aa3.23□□□□□ -1.89
CDH8-204ENST00000577536 EXOC5O00471 708 aa3.23□□□□□ -1.89
CDH8-204ENST00000577536 RRP9O43818 475 aaKnown RBP3.23□□□□□ -1.89
CDH8-204ENST00000577536 TMPRSS11DO60235 418 aa3.23□□□□□ -1.89
CDH8-204ENST00000577536 PTDSS1P48651 473 aaKnown RBP3.23□□□□□ -1.89
CDH8-204ENST00000577536 EPHB1P54762 984 aa3.23□□□□□ -1.89
CDH8-204ENST00000577536 SUMO3P55854 103 aaPredicted RBP3.23□□□□□ -1.89
CDH8-204ENST00000577536 ZNF91Q05481 1191 aa3.23□□□□□ -1.89
CDH8-204ENST00000577536 SEC23BQ15437 767 aa3.23□□□□□ -1.89
CDH8-204ENST00000577536 NPY5RQ15761 445 aa3.23□□□□□ -1.89
CDH8-204ENST00000577536 APOA5Q6Q788 366 aa3.23□□□□□ -1.89
CDH8-204ENST00000577536 CRELD2Q6UXH1 353 aaPredicted RBP3.23□□□□□ -1.89
CDH8-204ENST00000577536 RANBP10Q6VN20 620 aa3.23□□□□□ -1.89
CDH8-204ENST00000577536 DCDC5Q6ZRR9 648 aa3.23□□□□□ -1.89
CDH8-204ENST00000577536 ZDHHC17Q8IUH5 632 aa3.23□□□□□ -1.89
CDH8-204ENST00000577536 CHPFQ8IZ52 775 aa3.23□□□□□ -1.89
CDH8-204ENST00000577536 KIAA0319LQ8IZA0 1049 aa3.23□□□□□ -1.89
CDH8-204ENST00000577536 NSMCE1Q8WV22 266 aa3.23□□□□□ -1.89
CDH8-204ENST00000577536 WDYHV1Q96HA8 205 aa3.23□□□□□ -1.89
CDH8-204ENST00000577536 HS6ST2Q96MM7 605 aa3.23□□□□□ -1.89
CDH8-204ENST00000577536 C22orf23Q9BZE7 217 aa3.23□□□□□ -1.89
CDH8-204ENST00000577536 SACM1LQ9NTJ5 587 aa3.23□□□□□ -1.89
CDH8-204ENST00000577536 ZIM2Q9NZV7 527 aa3.23□□□□□ -1.89
CDH8-204ENST00000577536 CPNE7Q9UBL6 633 aa3.23□□□□□ -1.89
CDH8-204ENST00000577536 MGAT4CQ9UBM8 478 aa3.23□□□□□ -1.89
CDH8-204ENST00000577536 ISM1B1AKI9 464 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 FAM227AF5H4B4 570 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 FRS3O43559 492 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 RASSF9O75901 435 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 PIAS2O75928 621 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 HGFP14210 728 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 BRAFP15056 766 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 ATF7P17544 494 aaPredicted RBP3.22□□□□□ -1.89
CDH8-204ENST00000577536 SCP2P22307 547 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 THBS4P35443 961 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 GATMP50440 423 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 PGDP52209 483 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 ID2Q02363 134 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 CFHR3Q02985 330 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 CFHR1Q03591 330 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 SRSF1Q07955 248 aaKnown RBP eCLIP3.22□□□□□ -1.89
CDH8-204ENST00000577536 ARHGEF7Q14155 803 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 KCNB1Q14721 858 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 ZNF750Q32MQ0 723 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 ANO7Q6IWH7 933 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 VSTM1Q6UX27 236 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 DEF8Q6ZN54 512 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 PIP4P1Q86T03 277 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 WASF1Q92558 559 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 NMD3Q96D46 503 aaKnown RBP3.22□□□□□ -1.89
CDH8-204ENST00000577536 STK31Q9BXU1 1019 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 DHX36Q9H2U1 1008 aaKnown RBP3.22□□□□□ -1.89
CDH8-204ENST00000577536 FOXP1Q9H334 677 aaPredicted RBP3.22□□□□□ -1.89
CDH8-204ENST00000577536 TMEM184CQ9NVA4 438 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 MAFFQ9ULX9 164 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 L1RE1Q9UN81 338 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 ZMYM2Q9UBW7 1377 aa3.22□□□□□ -1.89
CDH8-204ENST00000577536 CFAP69A5D8W1 941 aa3.21□□□□□ -1.9
CDH8-204ENST00000577536 FAM90A10PA6NDY2 464 aa3.21□□□□□ -1.9
CDH8-204ENST00000577536 AGPSO00116 658 aa3.21□□□□□ -1.9
CDH8-204ENST00000577536 TLR2O60603 784 aa3.21□□□□□ -1.9
CDH8-204ENST00000577536 CNOT3O75175 753 aaKnown RBP3.21□□□□□ -1.9
CDH8-204ENST00000577536 PARP1P09874 1014 aaKnown RBP3.21□□□□□ -1.9
CDH8-204ENST00000577536 U2AF1L5P0DN76 240 aaPredicted RBP3.21□□□□□ -1.9
CDH8-204ENST00000577536 CYP19A1P11511 503 aaPredicted RBP3.21□□□□□ -1.9
CDH8-204ENST00000577536 ACVR2AP27037 513 aa3.21□□□□□ -1.9
CDH8-204ENST00000577536 TKTP29401 623 aaKnown RBP3.21□□□□□ -1.9
CDH8-204ENST00000577536 CCKBRP32239 447 aa3.21□□□□□ -1.9
CDH8-204ENST00000577536 MCM5P33992 734 aa3.21□□□□□ -1.9
CDH8-204ENST00000577536 ITGA8P53708 1063 aa3.21□□□□□ -1.9
CDH8-204ENST00000577536 IGBP1P78318 339 aa3.21□□□□□ -1.9
CDH8-204ENST00000577536 U2AF1Q01081 240 aaKnown RBP eCLIP3.21□□□□□ -1.9
CDH8-204ENST00000577536 MFSD13AQ14CX5 517 aa3.21□□□□□ -1.9
CDH8-204ENST00000577536 CNN3Q15417 329 aaKnown RBP3.21□□□□□ -1.9
CDH8-204ENST00000577536 KLHL22Q53GT1 634 aa3.21□□□□□ -1.9
CDH8-204ENST00000577536 C3orf38Q5JPI3 329 aa3.21□□□□□ -1.9
CDH8-204ENST00000577536 CC2D1BQ5T0F9 858 aaKnown RBP3.21□□□□□ -1.9
CDH8-204ENST00000577536 RUSC1-AS1Q66K80 236 aa3.21□□□□□ -1.9
CDH8-204ENST00000577536 CXorf57Q6NSI4 855 aaKnown RBP3.21□□□□□ -1.9
CDH8-204ENST00000577536 NGDNQ8NEJ9 315 aaKnown RBP3.21□□□□□ -1.9
CDH8-204ENST00000577536 EDC3Q96F86 508 aaKnown RBP3.21□□□□□ -1.9
CDH8-204ENST00000577536 ZNF668Q96K58 619 aaPredicted RBP3.21□□□□□ -1.9
CDH8-204ENST00000577536 NKX1-2Q9UD57 310 aaPredicted RBP3.21□□□□□ -1.9
CDH8-204ENST00000577536 RGS17Q9UGC6 210 aaPredicted RBP3.21□□□□□ -1.9
CDH8-204ENST00000577536 AFF4Q9UHB7 1163 aaKnown RBP3.21□□□□□ -1.9
CDH8-204ENST00000577536 HDAC9Q9UKV0 1011 aa3.21□□□□□ -1.9
CDH8-204ENST00000577536 RIMKLBQ9ULI2 386 aa3.21□□□□□ -1.9
CDH8-204ENST00000577536 TPCN1Q9ULQ1 816 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms