RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 ENPEPQ07075 957 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 SIM2Q14190 667 aaPredicted RBP12.56□□□□□ -0.4
LITAF-219ENST00000576334 PPP2R5DQ14738 602 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 C2orf27AQ580R0 203 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 EMC10Q5UCC4 262 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 SNX30Q5VWJ9 437 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 SYNPOQ8N3V7 929 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 NAT16Q8N8M0 369 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 PDZD8Q8NEN9 1154 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 OVCA2Q8WZ82 227 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 NDRG1Q92597 394 aaKnown RBP12.56□□□□□ -0.4
LITAF-219ENST00000576334 SLC35C1Q96A29 364 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 P2RY11Q96G91 374 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 CCDC34Q96HJ3 373 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 TSG101Q99816 390 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 FAM126AQ9BYI3 521 aaPredicted RBP12.56□□□□□ -0.4
LITAF-219ENST00000576334 CTNND2Q9UQB3 1225 aa12.56□□□□□ -0.4
LITAF-219ENST00000576334 SLC16A3O15427 465 aaKnown RBP12.55□□□□□ -0.4
LITAF-219ENST00000576334 GREM1O60565 184 aa12.55□□□□□ -0.4
LITAF-219ENST00000576334 TLR5O60602 858 aa12.55□□□□□ -0.4
LITAF-219ENST00000576334 PFKLP17858 780 aa12.55□□□□□ -0.4
LITAF-219ENST00000576334 ID4P47928 161 aa12.55□□□□□ -0.4
LITAF-219ENST00000576334 KDSRQ06136 332 aa12.55□□□□□ -0.4
LITAF-219ENST00000576334 SPEM2Q0P670 501 aa12.55□□□□□ -0.4
LITAF-219ENST00000576334 CCDC6Q16204 474 aa12.55□□□□□ -0.4
LITAF-219ENST00000576334 LY6G5CQ5SRR4 150 aa12.55□□□□□ -0.4
LITAF-219ENST00000576334 TTI2Q6NXR4 508 aa12.55□□□□□ -0.4
LITAF-219ENST00000576334 SCD5Q86SK9 330 aa12.55□□□□□ -0.4
LITAF-219ENST00000576334 LONP2Q86WA8 852 aa12.55□□□□□ -0.4
LITAF-219ENST00000576334 TMEM25Q86YD3 366 aa12.55□□□□□ -0.4
LITAF-219ENST00000576334 CCDC33Q8N5R6 958 aa12.55□□□□□ -0.4
LITAF-219ENST00000576334 CCDC150Q8NCX0 1101 aa12.55□□□□□ -0.4
LITAF-219ENST00000576334 KAT5Q92993 513 aa12.55□□□□□ -0.4
LITAF-219ENST00000576334 TMEM176AQ96HP8 235 aa12.55□□□□□ -0.4
LITAF-219ENST00000576334 ARMCX3Q9UH62 379 aaPredicted RBP12.55□□□□□ -0.4
LITAF-219ENST00000576334 SLC8A2Q9UPR5 921 aa12.55□□□□□ -0.4
LITAF-219ENST00000576334 SCML2Q9UQR0 700 aa12.55□□□□□ -0.4
LITAF-219ENST00000576334 INVSQ9Y283 1065 aa12.55□□□□□ -0.4
LITAF-219ENST00000576334 CEP250Q9BV73 2442 aa12.54□□□□□ -0.4
LITAF-219ENST00000576334 DCLK1O15075 740 aa12.54□□□□□ -0.4
LITAF-219ENST00000576334 CHRM1P11229 460 aaPredicted RBP12.54□□□□□ -0.4
LITAF-219ENST00000576334 HNRNPLP14866 589 aaKnown RBP eCLIP12.54□□□□□ -0.4
LITAF-219ENST00000576334 KIF11P52732 1056 aa12.54□□□□□ -0.4
LITAF-219ENST00000576334 AMPD2Q01433 879 aa12.54□□□□□ -0.4
LITAF-219ENST00000576334 LRRC63Q05C16 580 aa12.54□□□□□ -0.4
LITAF-219ENST00000576334 NR1H3Q13133 447 aa12.54□□□□□ -0.4
LITAF-219ENST00000576334 MORC3Q14149 939 aa12.54□□□□□ -0.4
LITAF-219ENST00000576334 CAMK4Q16566 473 aa12.54□□□□□ -0.4
LITAF-219ENST00000576334 WDR5BQ86VZ2 330 aa12.54□□□□□ -0.4
LITAF-219ENST00000576334 TTC30AQ86WT1 665 aa12.54□□□□□ -0.4
LITAF-219ENST00000576334 NELFBQ8WX92 580 aa12.54□□□□□ -0.4
LITAF-219ENST00000576334 ERLEC1Q96DZ1 483 aa12.54□□□□□ -0.4
LITAF-219ENST00000576334 KLF16Q9BXK1 252 aaPredicted RBP12.54□□□□□ -0.4
LITAF-219ENST00000576334 DUSP16Q9BY84 665 aa12.54□□□□□ -0.4
LITAF-219ENST00000576334 NACA2Q9H009 215 aa12.54□□□□□ -0.4
LITAF-219ENST00000576334 FBXO44Q9H4M3 255 aa12.54□□□□□ -0.4
LITAF-219ENST00000576334 TLR8Q9NR97 1041 aaKnown RBP12.54□□□□□ -0.4
LITAF-219ENST00000576334 COQ4Q9Y3A0 265 aa12.54□□□□□ -0.4
LITAF-219ENST00000576334 SH3BP1Q9Y3L3 701 aa12.54□□□□□ -0.4
LITAF-219ENST00000576334 E2F8A0AVK6 867 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 PSMA7O14818 248 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 STX10O60499 249 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 ADH5P11766 374 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 RARGP13631 454 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 TIE1P35590 1138 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 FMO5P49326 533 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 TUBP50607 506 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 CUL2Q13617 745 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 DMC1Q14565 340 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 GOLGA7BQ2TAP0 167 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 CCDC40Q4G0X9 1142 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 KBTBD6Q86V97 674 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 PIGZQ86VD9 579 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 PHTF2Q8N3S3 785 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 FAM160A2Q8N612 972 aaPredicted RBP12.53□□□□□ -0.4
LITAF-219ENST00000576334 UBR7Q8N806 425 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 UBA3Q8TBC4 463 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 USP33Q8TEY7 942 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 BHMTQ93088 406 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 DHTKD1Q96HY7 919 aaPredicted RBP12.53□□□□□ -0.4
LITAF-219ENST00000576334 CYLDQ9NQC7 956 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.53□□□□□ -0.4
LITAF-219ENST00000576334 COMMD8Q9NX08 183 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 NAGPAQ9UK23 515 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 USP18Q9UMW8 372 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.53□□□□□ -0.4
LITAF-219ENST00000576334 RALGAPA1Q6GYQ0 2036 aa12.53□□□□□ -0.4
LITAF-219ENST00000576334 RNF225M0QZC1 329 aaPredicted RBP12.52□□□□□ -0.41
LITAF-219ENST00000576334 PIK3R2O00459 728 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 SLC9A3R1O14745 358 aaPredicted RBP12.52□□□□□ -0.41
LITAF-219ENST00000576334 AXIN1O15169 862 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 ATG13O75143 517 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 KAT7O95251 611 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 HMBSP08397 361 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 ATP5C1P36542 298 aaKnown RBP12.52□□□□□ -0.41
LITAF-219ENST00000576334 PDE4CQ08493 712 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 STIM1Q13586 685 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 RSPO4Q2I0M5 234 aaPredicted RBP12.52□□□□□ -0.41
LITAF-219ENST00000576334 ANO4Q32M45 955 aa12.52□□□□□ -0.41
LITAF-219ENST00000576334 C10orf120Q5SQS8 335 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms