RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 KRT5P13647 590 aa14.29□□□□□ -0.12
CIITA-210ENST00000575513 ATP5C1P36542 298 aaKnown RBP14.29□□□□□ -0.12
CIITA-210ENST00000575513 TKTL1P51854 596 aa14.29□□□□□ -0.12
CIITA-210ENST00000575513 NR1H3Q13133 447 aa14.29□□□□□ -0.12
CIITA-210ENST00000575513 ZSCAN23Q3MJ62 389 aa14.29□□□□□ -0.12
CIITA-210ENST00000575513 HSP90AA4PQ58FG1 418 aa14.29□□□□□ -0.12
CIITA-210ENST00000575513 DPY19L2P1Q6NXN4 242 aa14.29□□□□□ -0.12
CIITA-210ENST00000575513 MAMSTRQ6ZN01 415 aa14.29□□□□□ -0.12
CIITA-210ENST00000575513 DTWD2Q8NBA8 298 aa14.29□□□□□ -0.12
CIITA-210ENST00000575513 ANKRD20A12PQ8NF67 263 aa14.29□□□□□ -0.12
CIITA-210ENST00000575513 RIN3Q8TB24 985 aa14.29□□□□□ -0.12
CIITA-210ENST00000575513 ATP2A3Q93084 1043 aa14.29□□□□□ -0.12
CIITA-210ENST00000575513 EXOC4Q96A65 974 aa14.29□□□□□ -0.12
CIITA-210ENST00000575513 OTUB2Q96DC9 234 aa14.29□□□□□ -0.12
CIITA-210ENST00000575513 HSFY1Q96LI6 401 aa14.29□□□□□ -0.12
CIITA-210ENST00000575513 ZSWIM1Q9BR11 485 aa14.29□□□□□ -0.12
CIITA-210ENST00000575513 FOXQ1Q9C009 403 aa14.29□□□□□ -0.12
CIITA-210ENST00000575513 CCSER2Q9H7U1 834 aa14.29□□□□□ -0.12
CIITA-210ENST00000575513 LRRC4Q9HBW1 653 aa14.29□□□□□ -0.12
CIITA-210ENST00000575513 HPS4Q9NQG7 708 aa14.29□□□□□ -0.12
CIITA-210ENST00000575513 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.29□□□□□ -0.12
CIITA-210ENST00000575513 TBC1D14Q9P2M4 693 aa14.29□□□□□ -0.12
CIITA-210ENST00000575513 DAAM1Q9Y4D1 1078 aa14.29□□□□□ -0.12
CIITA-210ENST00000575513 A0A1W2PQH9 124 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 SPECC1L-ADORA2AF8WAN1 911 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 CAVIN2O95810 425 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 RARGP13631 454 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 ZNF18P17022 549 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 CD72P21854 359 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 CTHP32929 405 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 IFNAR2P48551 515 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 RPL34P49207 117 aaKnown RBP14.28□□□□□ -0.12
CIITA-210ENST00000575513 PGFP49763 221 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 PTPN5P54829 565 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 TNK2Q07912 1038 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 KCNMA1Q12791 1236 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 FZD5Q13467 585 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 UBXN2BQ14CS0 331 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 NCAPHQ15003 741 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 KRT31Q15323 416 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 EML3Q32P44 896 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 ANO6Q4KMQ2 910 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 KLHDC7AQ5VTJ3 777 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 SCD5Q86SK9 330 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 ADGRG2Q8IZP9 1017 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 CPA6Q8N4T0 437 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 UBA3Q8TBC4 463 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 STK32AQ8WU08 396 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 ZNF606Q8WXB4 792 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 ZFRQ96KR1 1074 aaKnown RBP14.28□□□□□ -0.12
CIITA-210ENST00000575513 IER2Q9BTL4 223 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 NACA2Q9H009 215 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 EBF3Q9H4W6 596 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 ECT2Q9H8V3 914 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 NMUR1Q9HB89 426 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 PLCB1Q9NQ66 1216 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 CNGB3Q9NQW8 809 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 OSER1Q9NX31 292 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 LIMA1Q9UHB6 759 aaKnown RBP14.28□□□□□ -0.12
CIITA-210ENST00000575513 DNMT3LQ9UJW3 386 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 NAGPAQ9UK23 515 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 DNAJC12Q9UKB3 198 aa14.28□□□□□ -0.12
CIITA-210ENST00000575513 ZNF638Q14966 1978 aaKnown RBP14.27□□□□□ -0.12
CIITA-210ENST00000575513 ANAPC1Q9H1A4 1944 aa14.27□□□□□ -0.12
CIITA-210ENST00000575513 OBSL1O75147 1896 aa14.27□□□□□ -0.12
CIITA-210ENST00000575513 SMTNL1A8MU46 457 aa14.27□□□□□ -0.13
CIITA-210ENST00000575513 BECN2A8MW95 431 aa14.27□□□□□ -0.13
CIITA-210ENST00000575513 PES1O00541 588 aaKnown RBP14.27□□□□□ -0.13
CIITA-210ENST00000575513 NFATC1O95644 943 aa14.27□□□□□ -0.13
CIITA-210ENST00000575513 BRD2P25440 801 aaKnown RBP14.27□□□□□ -0.13
CIITA-210ENST00000575513 TARSP26639 723 aaKnown RBP14.27□□□□□ -0.13
CIITA-210ENST00000575513 GPD2P43304 727 aa14.27□□□□□ -0.13
CIITA-210ENST00000575513 BPIFB4P59827 614 aa14.27□□□□□ -0.13
CIITA-210ENST00000575513 GOLGA8FQ08AF8 430 aa14.27□□□□□ -0.13
CIITA-210ENST00000575513 GOLGA8DPQ0D2H9 430 aa14.27□□□□□ -0.13
CIITA-210ENST00000575513 ARHGAP44Q17R89 818 aa14.27□□□□□ -0.13
CIITA-210ENST00000575513 DGKKQ5KSL6 1271 aa14.27□□□□□ -0.13
CIITA-210ENST00000575513 PMF1Q6P1K2 205 aa14.27□□□□□ -0.13
CIITA-210ENST00000575513 GJB7Q6PEY0 223 aa14.27□□□□□ -0.13
CIITA-210ENST00000575513 SYNPOQ8N3V7 929 aa14.27□□□□□ -0.13
CIITA-210ENST00000575513 IRGQQ8WZA9 623 aa14.27□□□□□ -0.13
CIITA-210ENST00000575513 KLF16Q9BXK1 252 aaPredicted RBP14.27□□□□□ -0.13
CIITA-210ENST00000575513 LINC00597Q9H2U6 94 aa14.27□□□□□ -0.13
CIITA-210ENST00000575513 SMPD4Q9NXE4 827 aa14.27□□□□□ -0.13
CIITA-210ENST00000575513 CFAP97Q9P2B7 532 aa14.27□□□□□ -0.13
CIITA-210ENST00000575513 MTF2Q9Y483 593 aaPredicted RBP14.27□□□□□ -0.13
CIITA-210ENST00000575513 MUC6Q6W4X9 2439 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 OTOL1A6NHN0 477 aaPredicted RBP14.26□□□□□ -0.13
CIITA-210ENST00000575513 M0QYV0 167 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 TULP2O00295 520 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 TRDMT1O14717 391 aaKnown RBP14.26□□□□□ -0.13
CIITA-210ENST00000575513 FBXO21O94952 628 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 TBX18O95935 607 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 DCNP07585 359 aaKnown RBP14.26□□□□□ -0.13
CIITA-210ENST00000575513 ARSAP15289 507 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 CDK11BP21127 795 aaKnown RBP14.26□□□□□ -0.13
CIITA-210ENST00000575513 GNA15P30679 374 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 ACADSBP45954 432 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 ZNF165P49910 485 aa14.26□□□□□ -0.13
CIITA-210ENST00000575513 YWHAGP61981 247 aaKnown RBP eCLIP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms